EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000010484 (Gene tree)
Gene ID: 106953559
Gene Symbol: trub2
Alias: -
Full Name: TruB pseudouridine synthase family member 2
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4372 bases
Position: chrKQ545903.1:191066-195437
Accession: 106953559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000024359	TruB_N	PF01509.18	3.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000003580	-	2738	XM_015042415	ENSPLAP00000024359	349 (aa)	XP_014897901	UPI00072DE221

Gene Model

Click here to download ENSPLAG00000010484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000010484	trub2	57	33.500	ENSPLAG00000013855	trub1	69	33.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000010484	trub2	80	55.197	ENSG00000167112	TRUB2	84	55.197	Homo_sapiens
ENSPLAG00000010484	trub2	51	66.484	ENSAPOG00000018216	-	86	65.934	Acanthochromis_polyacanthus
ENSPLAG00000010484	trub2	71	70.690	ENSAPOG00000018284	-	91	70.115	Acanthochromis_polyacanthus
ENSPLAG00000010484	trub2	71	72.581	ENSAPOG00000015733	trub2	88	72.177	Acanthochromis_polyacanthus
ENSPLAG00000010484	trub2	81	54.895	ENSAMEG00000015395	TRUB2	84	55.872	Ailuropoda_melanoleuca
ENSPLAG00000010484	trub2	91	72.414	ENSACIG00000016500	trub2	96	72.414	Amphilophus_citrinellus
ENSPLAG00000010484	trub2	92	72.897	ENSAOCG00000002330	trub2	93	72.586	Amphiprion_ocellaris
ENSPLAG00000010484	trub2	92	73.209	ENSAPEG00000013177	trub2	93	72.897	Amphiprion_percula
ENSPLAG00000010484	trub2	87	70.820	ENSATEG00000011371	trub2	88	75.269	Anabas_testudineus
ENSPLAG00000010484	trub2	80	51.601	ENSAPLG00000009254	TRUB2	91	51.601	Anas_platyrhynchos
ENSPLAG00000010484	trub2	80	55.036	ENSACAG00000007331	TRUB2	84	55.036	Anolis_carolinensis
ENSPLAG00000010484	trub2	86	53.156	ENSANAG00000036234	TRUB2	89	55.556	Aotus_nancymaae
ENSPLAG00000010484	trub2	91	73.585	ENSACLG00000010793	trub2	95	73.585	Astatotilapia_calliptera
ENSPLAG00000010484	trub2	85	61.356	ENSAMXG00000031679	trub2	81	62.898	Astyanax_mexicanus
ENSPLAG00000010484	trub2	81	53.873	ENSCJAG00000020009	TRUB2	84	54.839	Callithrix_jacchus
ENSPLAG00000010484	trub2	81	53.147	ENSCAFG00000020068	TRUB2	84	54.093	Canis_familiaris
ENSPLAG00000010484	trub2	81	54.035	ENSCHIG00000021160	TRUB2	84	55.000	Capra_hircus
ENSPLAG00000010484	trub2	80	56.184	ENSTSYG00000034163	TRUB2	84	56.184	Carlito_syrichta
ENSPLAG00000010484	trub2	72	53.360	ENSCAPG00000000223	TRUB2	89	50.714	Cavia_aperea
ENSPLAG00000010484	trub2	81	54.417	ENSCPOG00000013535	TRUB2	87	52.941	Cavia_porcellus
ENSPLAG00000010484	trub2	80	51.613	ENSCCAG00000028463	-	84	51.613	Cebus_capucinus
ENSPLAG00000010484	trub2	80	54.839	ENSCCAG00000026531	-	85	54.839	Cebus_capucinus
ENSPLAG00000010484	trub2	88	53.094	ENSCATG00000038234	TRUB2	84	55.914	Cercocebus_atys
ENSPLAG00000010484	trub2	85	52.843	ENSCLAG00000001702	TRUB2	87	53.488	Chinchilla_lanigera
ENSPLAG00000010484	trub2	88	50.161	ENSCSAG00000014117	TRUB2	84	53.004	Chlorocebus_sabaeus
ENSPLAG00000010484	trub2	81	53.004	ENSCHOG00000001555	TRUB2	84	53.957	Choloepus_hoffmanni
ENSPLAG00000010484	trub2	88	52.716	ENSCPBG00000025186	TRUB2	82	56.989	Chrysemys_picta_bellii
ENSPLAG00000010484	trub2	73	34.749	ENSCSAVG00000003930	-	79	34.749	Ciona_savignyi
ENSPLAG00000010484	trub2	80	50.179	ENSCANG00000016135	TRUB2	83	50.179	Colobus_angolensis_palliatus
ENSPLAG00000010484	trub2	81	51.590	ENSCGRG00001024441	Trub2	91	49.412	Cricetulus_griseus_chok1gshd
ENSPLAG00000010484	trub2	81	51.590	ENSCGRG00000005633	Trub2	84	52.518	Cricetulus_griseus_crigri
ENSPLAG00000010484	trub2	93	61.231	ENSCSEG00000001331	trub2	83	67.143	Cynoglossus_semilaevis
ENSPLAG00000010484	trub2	92	76.947	ENSCVAG00000009901	trub2	95	76.947	Cyprinodon_variegatus
ENSPLAG00000010484	trub2	84	63.014	ENSDARG00000028379	trub2	80	64.286	Danio_rerio
ENSPLAG00000010484	trub2	76	37.943	ENSDNOG00000043967	-	81	39.259	Dasypus_novemcinctus
ENSPLAG00000010484	trub2	79	55.197	ENSDNOG00000045679	-	83	55.197	Dasypus_novemcinctus
ENSPLAG00000010484	trub2	81	54.225	ENSDORG00000016222	Trub2	88	55.197	Dipodomys_ordii
ENSPLAG00000010484	trub2	80	32.155	FBgn0033060	CG7849	88	32.155	Drosophila_melanogaster
ENSPLAG00000010484	trub2	85	52.365	ENSETEG00000009114	TRUB2	86	53.957	Echinops_telfairi
ENSPLAG00000010484	trub2	60	45.312	ENSEBUG00000015723	trub2	77	45.312	Eptatretus_burgeri
ENSPLAG00000010484	trub2	85	53.156	ENSEASG00005016819	TRUB2	84	55.357	Equus_asinus_asinus
ENSPLAG00000010484	trub2	85	53.156	ENSECAG00000023520	TRUB2	84	55.396	Equus_caballus
ENSPLAG00000010484	trub2	85	51.839	ENSEEUG00000008908	TRUB2	84	53.957	Erinaceus_europaeus
ENSPLAG00000010484	trub2	83	65.563	ENSELUG00000002376	trub2	92	66.667	Esox_lucius
ENSPLAG00000010484	trub2	83	54.110	ENSFCAG00000005839	TRUB2	88	55.052	Felis_catus
ENSPLAG00000010484	trub2	72	54.400	ENSFALG00000001364	TRUB2	80	55.200	Ficedula_albicollis
ENSPLAG00000010484	trub2	85	53.512	ENSFDAG00000021374	TRUB2	95	49.730	Fukomys_damarensis
ENSPLAG00000010484	trub2	94	71.429	ENSFHEG00000014655	trub2	97	70.821	Fundulus_heteroclitus
ENSPLAG00000010484	trub2	82	59.582	ENSGMOG00000000981	trub2	92	60.932	Gadus_morhua
ENSPLAG00000010484	trub2	83	53.448	ENSGALG00000004920	TRUB2	71	53.448	Gallus_gallus
ENSPLAG00000010484	trub2	94	91.185	ENSGAFG00000010107	trub2	97	91.185	Gambusia_affinis
ENSPLAG00000010484	trub2	90	69.592	ENSGACG00000001476	trub2	84	75.000	Gasterosteus_aculeatus
ENSPLAG00000010484	trub2	81	56.338	ENSGAGG00000022872	TRUB2	82	56.631	Gopherus_agassizii
ENSPLAG00000010484	trub2	80	54.839	ENSGGOG00000014780	TRUB2	84	54.839	Gorilla_gorilla
ENSPLAG00000010484	trub2	91	73.899	ENSHBUG00000022384	trub2	95	73.899	Haplochromis_burtoni
ENSPLAG00000010484	trub2	81	52.797	ENSHGLG00000016715	TRUB2	84	53.737	Heterocephalus_glaber_female
ENSPLAG00000010484	trub2	81	52.797	ENSHGLG00100016548	TRUB2	84	53.737	Heterocephalus_glaber_male
ENSPLAG00000010484	trub2	89	71.061	ENSHCOG00000017748	trub2	86	76.786	Hippocampus_comes
ENSPLAG00000010484	trub2	80	54.643	ENSSTOG00000008024	-	88	51.445	Ictidomys_tridecemlineatus
ENSPLAG00000010484	trub2	81	53.684	ENSSTOG00000022617	-	84	54.643	Ictidomys_tridecemlineatus
ENSPLAG00000010484	trub2	88	46.278	ENSJJAG00000019181	Trub2	83	48.746	Jaculus_jaculus
ENSPLAG00000010484	trub2	83	78.201	ENSKMAG00000007861	trub2	84	79.643	Kryptolebias_marmoratus
ENSPLAG00000010484	trub2	91	68.966	ENSLBEG00000000907	trub2	83	75.000	Labrus_bergylta
ENSPLAG00000010484	trub2	93	50.926	ENSLACG00000001515	TRUB2	82	55.235	Latimeria_chalumnae
ENSPLAG00000010484	trub2	80	62.950	ENSLOCG00000000885	trub2	92	62.950	Lepisosteus_oculatus
ENSPLAG00000010484	trub2	81	53.710	ENSLAFG00000002174	TRUB2	91	54.676	Loxodonta_africana
ENSPLAG00000010484	trub2	88	52.769	ENSMFAG00000000881	TRUB2	84	55.556	Macaca_fascicularis
ENSPLAG00000010484	trub2	88	52.769	ENSMMUG00000014146	TRUB2	84	55.556	Macaca_mulatta
ENSPLAG00000010484	trub2	88	52.769	ENSMNEG00000011189	TRUB2	84	55.556	Macaca_nemestrina
ENSPLAG00000010484	trub2	88	52.769	ENSMLEG00000037270	TRUB2	84	55.556	Mandrillus_leucophaeus
ENSPLAG00000010484	trub2	83	72.414	ENSMAMG00000023643	trub2	93	74.286	Mastacembelus_armatus
ENSPLAG00000010484	trub2	91	73.899	ENSMZEG00005016018	trub2	95	73.899	Maylandia_zebra
ENSPLAG00000010484	trub2	52	57.377	ENSMGAG00000003894	TRUB2	92	57.377	Meleagris_gallopavo
ENSPLAG00000010484	trub2	81	52.113	ENSMAUG00000010403	Trub2	87	50.581	Mesocricetus_auratus
ENSPLAG00000010484	trub2	81	54.770	ENSMICG00000047032	TRUB2	84	55.755	Microcebus_murinus
ENSPLAG00000010484	trub2	85	51.689	ENSMOCG00000014291	Trub2	92	53.405	Microtus_ochrogaster
ENSPLAG00000010484	trub2	88	69.707	ENSMMOG00000021674	trub2	86	73.929	Mola_mola
ENSPLAG00000010484	trub2	81	53.147	ENSMODG00000005940	TRUB2	94	53.901	Monodelphis_domestica
ENSPLAG00000010484	trub2	92	72.222	ENSMALG00000021231	trub2	95	71.914	Monopterus_albus
ENSPLAG00000010484	trub2	81	51.408	MGP_CAROLIEiJ_G0023368	Trub2	88	49.708	Mus_caroli
ENSPLAG00000010484	trub2	81	51.408	ENSMUSG00000039826	Trub2	88	49.708	Mus_musculus
ENSPLAG00000010484	trub2	84	51.361	MGP_PahariEiJ_G0024826	Trub2	88	50.292	Mus_pahari
ENSPLAG00000010484	trub2	81	51.761	MGP_SPRETEiJ_G0024286	Trub2	88	50.292	Mus_spretus
ENSPLAG00000010484	trub2	85	52.980	ENSMPUG00000013206	TRUB2	76	55.160	Mustela_putorius_furo
ENSPLAG00000010484	trub2	80	55.755	ENSMLUG00000005256	TRUB2	83	55.755	Myotis_lucifugus
ENSPLAG00000010484	trub2	80	52.158	ENSNGAG00000018679	Trub2	84	52.158	Nannospalax_galili
ENSPLAG00000010484	trub2	91	72.727	ENSNBRG00000016294	trub2	96	73.125	Neolamprologus_brichardi
ENSPLAG00000010484	trub2	80	55.160	ENSNLEG00000017556	TRUB2	84	55.160	Nomascus_leucogenys
ENSPLAG00000010484	trub2	81	54.255	ENSMEUG00000000484	TRUB2	89	55.036	Notamacropus_eugenii
ENSPLAG00000010484	trub2	85	48.667	ENSOPRG00000001981	TRUB2	84	50.360	Ochotona_princeps
ENSPLAG00000010484	trub2	85	53.512	ENSODEG00000017292	TRUB2	85	55.396	Octodon_degus
ENSPLAG00000010484	trub2	91	73.354	ENSONIG00000004230	trub2	96	73.354	Oreochromis_niloticus
ENSPLAG00000010484	trub2	54	51.596	ENSOANG00000029023	-	83	51.596	Ornithorhynchus_anatinus
ENSPLAG00000010484	trub2	85	52.365	ENSOCUG00000026296	TRUB2	76	54.480	Oryctolagus_cuniculus
ENSPLAG00000010484	trub2	91	70.625	ENSORLG00000020011	trub2	92	70.625	Oryzias_latipes
ENSPLAG00000010484	trub2	93	69.018	ENSORLG00020011028	trub2	90	70.755	Oryzias_latipes_hni
ENSPLAG00000010484	trub2	91	71.069	ENSORLG00015007494	trub2	94	71.384	Oryzias_latipes_hsok
ENSPLAG00000010484	trub2	91	70.219	ENSOMEG00000006702	trub2	96	70.219	Oryzias_melastigma
ENSPLAG00000010484	trub2	57	56.500	ENSOARG00000003785	-	81	56.098	Ovis_aries
ENSPLAG00000010484	trub2	81	54.225	ENSOARG00000010579	-	84	55.197	Ovis_aries
ENSPLAG00000010484	trub2	80	55.556	ENSPPAG00000043146	TRUB2	84	55.556	Pan_paniscus
ENSPLAG00000010484	trub2	83	54.110	ENSPPRG00000006307	TRUB2	88	55.052	Panthera_pardus
ENSPLAG00000010484	trub2	82	55.401	ENSPTIG00000012366	TRUB2	88	55.401	Panthera_tigris_altaica
ENSPLAG00000010484	trub2	80	55.197	ENSPTRG00000052151	-	84	55.197	Pan_troglodytes
ENSPLAG00000010484	trub2	80	55.197	ENSPTRG00000021423	TRUB2	84	55.197	Pan_troglodytes
ENSPLAG00000010484	trub2	88	52.769	ENSPANG00000025856	TRUB2	84	55.556	Papio_anubis
ENSPLAG00000010484	trub2	84	65.306	ENSPKIG00000019769	trub2	90	68.116	Paramormyrops_kingsleyae
ENSPLAG00000010484	trub2	79	51.986	ENSPSIG00000015701	TRUB2	92	51.986	Pelodiscus_sinensis
ENSPLAG00000010484	trub2	84	65.217	ENSPMGG00000010206	trub2	88	67.730	Periophthalmus_magnuspinnatus
ENSPLAG00000010484	trub2	83	51.712	ENSPEMG00000017893	Trub2	91	49.708	Peromyscus_maniculatus_bairdii
ENSPLAG00000010484	trub2	82	54.386	ENSPCIG00000026731	TRUB2	90	55.160	Phascolarctos_cinereus
ENSPLAG00000010484	trub2	100	99.427	ENSPFOG00000018018	trub2	92	99.427	Poecilia_formosa
ENSPLAG00000010484	trub2	100	98.281	ENSPMEG00000012913	trub2	100	98.281	Poecilia_mexicana
ENSPLAG00000010484	trub2	94	94.529	ENSPREG00000002549	trub2	97	94.833	Poecilia_reticulata
ENSPLAG00000010484	trub2	80	54.839	ENSPPYG00000019650	TRUB2	85	54.839	Pongo_abelii
ENSPLAG00000010484	trub2	82	54.386	ENSPCAG00000015068	TRUB2	85	55.357	Procavia_capensis
ENSPLAG00000010484	trub2	81	55.124	ENSPCOG00000017100	TRUB2	84	56.115	Propithecus_coquereli
ENSPLAG00000010484	trub2	76	53.208	ENSPVAG00000001224	TRUB2	87	54.231	Pteropus_vampyrus
ENSPLAG00000010484	trub2	91	73.899	ENSPNYG00000013666	trub2	95	73.899	Pundamilia_nyererei
ENSPLAG00000010484	trub2	92	57.231	ENSPNAG00000017292	trub2	79	63.899	Pygocentrus_nattereri
ENSPLAG00000010484	trub2	85	51.495	ENSRNOG00000043189	Trub2	86	53.214	Rattus_norvegicus
ENSPLAG00000010484	trub2	87	48.845	ENSRBIG00000006965	TRUB2	83	50.896	Rhinopithecus_bieti
ENSPLAG00000010484	trub2	87	53.795	ENSRROG00000042928	TRUB2	84	56.272	Rhinopithecus_roxellana
ENSPLAG00000010484	trub2	80	55.036	ENSSBOG00000022439	TRUB2	84	55.036	Saimiri_boliviensis_boliviensis
ENSPLAG00000010484	trub2	79	64.982	ENSSFOG00015013391	trub2	88	64.982	Scleropages_formosus
ENSPLAG00000010484	trub2	90	69.906	ENSSMAG00000020820	trub2	95	68.519	Scophthalmus_maximus
ENSPLAG00000010484	trub2	80	76.786	ENSSDUG00000016928	trub2	94	71.069	Seriola_dumerili
ENSPLAG00000010484	trub2	91	69.279	ENSSLDG00000024701	trub2	94	69.592	Seriola_lalandi_dorsalis
ENSPLAG00000010484	trub2	81	52.297	ENSSPUG00000015515	TRUB2	83	52.688	Sphenodon_punctatus
ENSPLAG00000010484	trub2	92	71.340	ENSSPAG00000017865	trub2	85	78.929	Stegastes_partitus
ENSPLAG00000010484	trub2	80	54.122	ENSSSCG00000005645	TRUB2	84	53.815	Sus_scrofa
ENSPLAG00000010484	trub2	71	55.242	ENSTGUG00000003704	TRUB2	94	55.242	Taeniopygia_guttata
ENSPLAG00000010484	trub2	89	68.932	ENSTRUG00000015499	trub2	86	74.286	Takifugu_rubripes
ENSPLAG00000010484	trub2	81	71.986	ENSTNIG00000014721	trub2	96	72.500	Tetraodon_nigroviridis
ENSPLAG00000010484	trub2	52	51.913	ENSTBEG00000000586	TRUB2	79	53.371	Tupaia_belangeri
ENSPLAG00000010484	trub2	81	52.113	ENSTTRG00000016486	TRUB2	84	53.047	Tursiops_truncatus
ENSPLAG00000010484	trub2	81	54.196	ENSUAMG00000020276	TRUB2	82	55.160	Ursus_americanus
ENSPLAG00000010484	trub2	81	54.545	ENSUMAG00000022051	TRUB2	82	55.516	Ursus_maritimus
ENSPLAG00000010484	trub2	81	41.901	ENSVPAG00000005793	TRUB2	88	42.652	Vicugna_pacos
ENSPLAG00000010484	trub2	81	53.147	ENSVVUG00000013451	TRUB2	79	54.093	Vulpes_vulpes
ENSPLAG00000010484	trub2	81	54.577	ENSXETG00000003973	trub2	85	55.357	Xenopus_tropicalis
ENSPLAG00000010484	trub2	94	92.097	ENSXCOG00000008759	trub2	97	92.097	Xiphophorus_couchianus
ENSPLAG00000010484	trub2	94	92.705	ENSXMAG00000015478	trub2	97	92.705	Xiphophorus_maculatus