EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000010754 (Gene tree)
Gene ID
106935703
Gene Symbol
puf60b
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Minus strand
Length
14618 bases
Position
chrKQ547314.1:78562-93179
Accession
106935703
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000008213RRM_1PF00076.228.2e-4412
ENSPLAP00000008213RRM_1PF00076.228.2e-4422
ENSPLAP00000024492RRM_1PF00076.229.5e-4412
ENSPLAP00000024492RRM_1PF00076.229.5e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000003261-2307XM_015016299ENSPLAP00000008213496 (aa)XP_014871785-
ENSPLAT00000003249-2358XM_015016295ENSPLAP00000024492513 (aa)XP_014871781-
Gene Model
Click here to download ENSPLAG00000010754's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010754's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000010754puf60b10082.330ENSPLAG00000017025-9082.136
ENSPLAG00000010754puf60b5932.432ENSPLAG00000018202celf3b5332.323
ENSPLAG00000010754puf60b5437.255ENSPLAG00000003275-7137.255
ENSPLAG00000010754puf60b5636.275ENSPLAG00000014365u2af2a6638.235
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000010754puf60b10085.988ENSG00000179950PUF6010084.837Homo_sapiens
ENSPLAG00000010754puf60b10097.661ENSAPOG00000001713puf60b9897.661Acanthochromis_polyacanthus
ENSPLAG00000010754puf60b10084.069ENSAMEG00000006406PUF609282.726Ailuropoda_melanoleuca
ENSPLAG00000010754puf60b10077.821ENSACIG00000003263-9977.670Amphilophus_citrinellus
ENSPLAG00000010754puf60b10098.051ENSACIG00000021705puf60b10098.051Amphilophus_citrinellus
ENSPLAG00000010754puf60b10097.661ENSAOCG00000005395puf60b10097.661Amphiprion_ocellaris
ENSPLAG00000010754puf60b10083.658ENSAOCG00000015558-9784.047Amphiprion_ocellaris
ENSPLAG00000010754puf60b10095.161ENSAPEG00000011923puf60b9795.161Amphiprion_percula
ENSPLAG00000010754puf60b10077.154ENSAPEG00000001836-9978.088Amphiprion_percula
ENSPLAG00000010754puf60b10098.441ENSATEG00000001730puf60b9898.441Anabas_testudineus
ENSPLAG00000010754puf60b10082.296ENSATEG00000006303-9882.879Anabas_testudineus
ENSPLAG00000010754puf60b10086.564ENSAPLG00000010150PUF609985.413Anas_platyrhynchos
ENSPLAG00000010754puf60b10085.496ENSACAG00000001645PUF609684.542Anolis_carolinensis
ENSPLAG00000010754puf60b10085.797ENSANAG00000018626PUF6010084.645Aotus_nancymaae
ENSPLAG00000010754puf60b10098.051ENSACLG00000004462puf60b10098.051Astatotilapia_calliptera
ENSPLAG00000010754puf60b10080.835ENSAMXG00000041030puf60b10081.404Astyanax_mexicanus
ENSPLAG00000010754puf60b10087.425ENSAMXG00000036570puf60a9787.625Astyanax_mexicanus
ENSPLAG00000010754puf60b10086.372ENSBTAG00000037493PUF609885.221Bos_taurus
ENSPLAG00000010754puf60b8053.710WBGene00004389rnp-68354.704Caenorhabditis_elegans
ENSPLAG00000010754puf60b10085.988ENSCJAG00000021485PUF609784.837Callithrix_jacchus
ENSPLAG00000010754puf60b10085.797ENSCAFG00000001400PUF609284.645Canis_familiaris
ENSPLAG00000010754puf60b10086.180ENSCAFG00020018754PUF609785.029Canis_lupus_dingo
ENSPLAG00000010754puf60b10086.372ENSCHIG00000001618PUF608685.221Capra_hircus
ENSPLAG00000010754puf60b10086.180ENSTSYG00000011912PUF6010085.029Carlito_syrichta
ENSPLAG00000010754puf60b10081.333ENSCPOG00000014613PUF609380.000Cavia_porcellus
ENSPLAG00000010754puf60b10086.180ENSCCAG00000007744PUF609785.029Cebus_capucinus
ENSPLAG00000010754puf60b10085.988ENSCATG00000035405PUF609784.837Cercocebus_atys
ENSPLAG00000010754puf60b10086.180ENSCLAG00000009154PUF609185.029Chinchilla_lanigera
ENSPLAG00000010754puf60b10085.988ENSCSAG00000008878PUF6010084.837Chlorocebus_sabaeus
ENSPLAG00000010754puf60b10085.605ENSCPBG00000005595PUF609784.645Chrysemys_picta_bellii
ENSPLAG00000010754puf60b6261.994ENSCING00000002156-8762.500Ciona_intestinalis
ENSPLAG00000010754puf60b9848.544ENSCING00000008436-9548.330Ciona_intestinalis
ENSPLAG00000010754puf60b9754.286ENSCSAVG00000001385-9954.143Ciona_savignyi
ENSPLAG00000010754puf60b9749.482ENSCSAVG00000004765-9748.571Ciona_savignyi
ENSPLAG00000010754puf60b8185.545ENSCANG00000041843PUF6010084.123Colobus_angolensis_palliatus
ENSPLAG00000010754puf60b10086.372ENSCGRG00001017442Puf609185.221Cricetulus_griseus_chok1gshd
ENSPLAG00000010754puf60b10086.372ENSCGRG00000003717Puf609285.221Cricetulus_griseus_crigri
ENSPLAG00000010754puf60b10079.482ENSCSEG00000014845-8980.279Cynoglossus_semilaevis
ENSPLAG00000010754puf60b10098.051ENSCSEG00000019887puf60b9198.051Cynoglossus_semilaevis
ENSPLAG00000010754puf60b9082.960ENSCVAG00000001560-9881.197Cyprinodon_variegatus
ENSPLAG00000010754puf60b10099.025ENSCVAG00000009386puf60b10099.025Cyprinodon_variegatus
ENSPLAG00000010754puf60b10081.784ENSDARG00000001241puf60b9998.413Danio_rerio
ENSPLAG00000010754puf60b10087.283ENSDARG00000032175puf60a9991.925Danio_rerio
ENSPLAG00000010754puf60b9971.595ENSDNOG00000043278PUF609071.206Dasypus_novemcinctus
ENSPLAG00000010754puf60b10086.372ENSDORG00000004585Puf609485.221Dipodomys_ordii
ENSPLAG00000010754puf60b8466.667FBgn0028577hfp7267.843Drosophila_melanogaster
ENSPLAG00000010754puf60b9772.577ENSEBUG00000005470-8871.546Eptatretus_burgeri
ENSPLAG00000010754puf60b10061.565ENSEBUG00000014291puf60b8462.413Eptatretus_burgeri
ENSPLAG00000010754puf60b10086.180ENSEASG00005009695PUF609785.029Equus_asinus_asinus
ENSPLAG00000010754puf60b10086.180ENSECAG00000024681PUF609685.029Equus_caballus
ENSPLAG00000010754puf60b10087.977ENSELUG00000006507puf60b9985.662Esox_lucius
ENSPLAG00000010754puf60b10088.600ENSELUG00000018443-9988.600Esox_lucius
ENSPLAG00000010754puf60b10086.180ENSFCAG00000001045PUF6010085.029Felis_catus
ENSPLAG00000010754puf60b10077.351ENSFALG00000001136PUF609776.775Ficedula_albicollis
ENSPLAG00000010754puf60b10085.988ENSFDAG00000017177PUF609184.837Fukomys_damarensis
ENSPLAG00000010754puf60b9682.485ENSFHEG00000021687PUF6010083.402Fundulus_heteroclitus
ENSPLAG00000010754puf60b10099.805ENSFHEG00000020046puf60b10099.805Fundulus_heteroclitus
ENSPLAG00000010754puf60b10083.012ENSGMOG00000006392puf60b9982.625Gadus_morhua
ENSPLAG00000010754puf60b6689.504ENSGALG00000039901PUF609390.533Gallus_gallus
ENSPLAG00000010754puf60b10080.723ENSGAFG00000004334-9980.903Gambusia_affinis
ENSPLAG00000010754puf60b10099.805ENSGAFG00000021040puf60b10099.805Gambusia_affinis
ENSPLAG00000010754puf60b10084.211ENSGACG00000004717puf60b9784.211Gasterosteus_aculeatus
ENSPLAG00000010754puf60b10073.152ENSGACG00000001484-10072.179Gasterosteus_aculeatus
ENSPLAG00000010754puf60b10085.605ENSGAGG00000013289PUF609184.645Gopherus_agassizii
ENSPLAG00000010754puf60b10085.988ENSGGOG00000004646PUF609784.837Gorilla_gorilla
ENSPLAG00000010754puf60b10083.702ENSHBUG00000009634-10083.300Haplochromis_burtoni
ENSPLAG00000010754puf60b10098.051ENSHBUG00000015118puf60b10098.051Haplochromis_burtoni
ENSPLAG00000010754puf60b10085.988ENSHGLG00000006111PUF609184.837Heterocephalus_glaber_female
ENSPLAG00000010754puf60b10085.988ENSHGLG00100012362PUF609184.837Heterocephalus_glaber_male
ENSPLAG00000010754puf60b9867.451ENSHCOG00000000378-9966.163Hippocampus_comes
ENSPLAG00000010754puf60b10092.481ENSHCOG00000015541puf60b9993.233Hippocampus_comes
ENSPLAG00000010754puf60b10085.542ENSIPUG00000002453puf60a9985.141Ictalurus_punctatus
ENSPLAG00000010754puf60b10082.197ENSIPUG00000004660puf60b9981.818Ictalurus_punctatus
ENSPLAG00000010754puf60b10086.180ENSSTOG00000025037PUF609285.029Ictidomys_tridecemlineatus
ENSPLAG00000010754puf60b10086.372ENSJJAG00000001076Puf609285.221Jaculus_jaculus
ENSPLAG00000010754puf60b10077.927ENSKMAG00000010106-10078.352Kryptolebias_marmoratus
ENSPLAG00000010754puf60b10099.415ENSKMAG00000016745puf60b10099.415Kryptolebias_marmoratus
ENSPLAG00000010754puf60b10093.957ENSLBEG00000012505puf60b10093.957Labrus_bergylta
ENSPLAG00000010754puf60b7380.054ENSLACG00000005456PUF6010078.016Latimeria_chalumnae
ENSPLAG00000010754puf60b10089.126ENSLOCG00000010106puf60b9889.126Lepisosteus_oculatus
ENSPLAG00000010754puf60b10085.029ENSLAFG00000022929PUF609383.877Loxodonta_africana
ENSPLAG00000010754puf60b10085.988ENSMFAG00000043373PUF609884.837Macaca_fascicularis
ENSPLAG00000010754puf60b10085.988ENSMMUG00000013558PUF609784.837Macaca_mulatta
ENSPLAG00000010754puf60b10085.988ENSMNEG00000031099PUF609784.837Macaca_nemestrina
ENSPLAG00000010754puf60b10085.988ENSMLEG00000040009PUF6010084.837Mandrillus_leucophaeus
ENSPLAG00000010754puf60b10083.495ENSMAMG00000019476-9883.689Mastacembelus_armatus
ENSPLAG00000010754puf60b10096.296ENSMAMG00000010394puf60b10093.738Mastacembelus_armatus
ENSPLAG00000010754puf60b10098.051ENSMZEG00005018515puf60b10098.051Maylandia_zebra
ENSPLAG00000010754puf60b10083.463ENSMZEG00005019425-9883.074Maylandia_zebra
ENSPLAG00000010754puf60b10086.564ENSMGAG00000013070PUF609390.855Meleagris_gallopavo
ENSPLAG00000010754puf60b6990.278ENSMAUG00000014267-8888.611Mesocricetus_auratus
ENSPLAG00000010754puf60b9671.047ENSMAUG00000018549-9570.287Mesocricetus_auratus
ENSPLAG00000010754puf60b10086.180ENSMICG00000012226PUF609885.029Microcebus_murinus
ENSPLAG00000010754puf60b10086.372ENSMOCG00000018780Puf609285.221Microtus_ochrogaster
ENSPLAG00000010754puf60b10076.305ENSMMOG00000018059-9976.376Mola_mola
ENSPLAG00000010754puf60b10098.246ENSMMOG00000004217puf60b10098.246Mola_mola
ENSPLAG00000010754puf60b10085.797ENSMODG00000009161PUF609384.645Monodelphis_domestica
ENSPLAG00000010754puf60b10090.058ENSMALG00000006797puf60b9790.058Monopterus_albus
ENSPLAG00000010754puf60b10082.296ENSMALG00000000200-9882.101Monopterus_albus
ENSPLAG00000010754puf60b10086.564MGP_CAROLIEiJ_G0019910Puf609185.413Mus_caroli
ENSPLAG00000010754puf60b10086.564ENSMUSG00000002524Puf609185.413Mus_musculus
ENSPLAG00000010754puf60b10086.564MGP_PahariEiJ_G0019920Puf609185.413Mus_pahari
ENSPLAG00000010754puf60b10086.564MGP_SPRETEiJ_G0020812Puf609185.413Mus_spretus
ENSPLAG00000010754puf60b10085.988ENSMPUG00000008137PUF609184.837Mustela_putorius_furo
ENSPLAG00000010754puf60b10085.605ENSMLUG00000000238-9284.453Myotis_lucifugus
ENSPLAG00000010754puf60b10082.143ENSMLUG00000013032-9780.952Myotis_lucifugus
ENSPLAG00000010754puf60b10086.372ENSNGAG00000000712Puf6010085.221Nannospalax_galili
ENSPLAG00000010754puf60b8395.413ENSNBRG00000013047puf60b9797.362Neolamprologus_brichardi
ENSPLAG00000010754puf60b10083.463ENSNBRG00000017223-9883.074Neolamprologus_brichardi
ENSPLAG00000010754puf60b10085.988ENSNLEG00000002156PUF609784.837Nomascus_leucogenys
ENSPLAG00000010754puf60b7293.863ENSOPRG00000002147PUF607293.863Ochotona_princeps
ENSPLAG00000010754puf60b9863.690ENSODEG00000015513-9762.089Octodon_degus
ENSPLAG00000010754puf60b7190.294ENSODEG00000014024-8990.294Octodon_degus
ENSPLAG00000010754puf60b10083.268ENSONIG00000014030-9782.879Oreochromis_niloticus
ENSPLAG00000010754puf60b10098.051ENSONIG00000006247puf60b9798.051Oreochromis_niloticus
ENSPLAG00000010754puf60b9772.200ENSOANG00000006962PUF609770.741Ornithorhynchus_anatinus
ENSPLAG00000010754puf60b9982.081ENSORLG00000028655-9981.888Oryzias_latipes
ENSPLAG00000010754puf60b10098.441ENSORLG00000012279puf60b10098.441Oryzias_latipes
ENSPLAG00000010754puf60b10098.441ENSORLG00020007333puf6010098.441Oryzias_latipes_hni
ENSPLAG00000010754puf60b9982.718ENSORLG00020018144-9782.524Oryzias_latipes_hni
ENSPLAG00000010754puf60b10098.058ENSORLG00015007718puf60b10098.058Oryzias_latipes_hsok
ENSPLAG00000010754puf60b9982.718ENSORLG00015016833-9782.524Oryzias_latipes_hsok
ENSPLAG00000010754puf60b10095.992ENSOMEG00000001643puf60b10095.161Oryzias_melastigma
ENSPLAG00000010754puf60b9982.897ENSOMEG00000022185-9782.490Oryzias_melastigma
ENSPLAG00000010754puf60b10086.180ENSOGAG00000006259PUF609285.029Otolemur_garnettii
ENSPLAG00000010754puf60b10084.556ENSOARG00000016235PUF609783.398Ovis_aries
ENSPLAG00000010754puf60b10085.988ENSPPAG00000029933PUF609784.837Pan_paniscus
ENSPLAG00000010754puf60b10086.180ENSPPRG00000003257PUF6010085.029Panthera_pardus
ENSPLAG00000010754puf60b10085.516ENSPTIG00000009795PUF609882.726Panthera_tigris_altaica
ENSPLAG00000010754puf60b10085.988ENSPTRG00000020670PUF609784.837Pan_troglodytes
ENSPLAG00000010754puf60b10085.988ENSPTRG00000043963-9784.837Pan_troglodytes
ENSPLAG00000010754puf60b10085.988ENSPANG00000021936PUF609784.837Papio_anubis
ENSPLAG00000010754puf60b10090.253ENSPKIG00000012204puf60b10091.033Paramormyrops_kingsleyae
ENSPLAG00000010754puf60b10089.400ENSPKIG00000004295puf60a9991.940Paramormyrops_kingsleyae
ENSPLAG00000010754puf60b10085.988ENSPSIG00000004679PUF609884.837Pelodiscus_sinensis
ENSPLAG00000010754puf60b10095.930ENSPMGG00000013444puf60b9995.930Periophthalmus_magnuspinnatus
ENSPLAG00000010754puf60b10086.372ENSPEMG00000008820Puf609285.221Peromyscus_maniculatus_bairdii
ENSPLAG00000010754puf60b10086.180ENSPCIG00000020270PUF609885.029Phascolarctos_cinereus
ENSPLAG00000010754puf60b100100.000ENSPFOG00000019217puf60b98100.000Poecilia_formosa
ENSPLAG00000010754puf60b10081.942ENSPFOG00000011118-9782.136Poecilia_formosa
ENSPLAG00000010754puf60b10082.136ENSPMEG00000009767-9082.330Poecilia_mexicana
ENSPLAG00000010754puf60b100100.000ENSPMEG00000000838puf60b100100.000Poecilia_mexicana
ENSPLAG00000010754puf60b10097.984ENSPREG00000005440puf60b10097.984Poecilia_reticulata
ENSPLAG00000010754puf60b8183.886ENSPPYG00000018951-9582.464Pongo_abelii
ENSPLAG00000010754puf60b8185.545ENSPCAG00000014837PUF6010084.123Procavia_capensis
ENSPLAG00000010754puf60b10085.988ENSPCOG00000027981PUF609884.837Propithecus_coquereli
ENSPLAG00000010754puf60b10096.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSPLAG00000010754puf60b10083.463ENSPNYG00000004273-9883.074Pundamilia_nyererei
ENSPLAG00000010754puf60b10098.051ENSPNYG00000002556puf60b10098.051Pundamilia_nyererei
ENSPLAG00000010754puf60b10082.863ENSPNAG00000019415puf60b8982.460Pygocentrus_nattereri
ENSPLAG00000010754puf60b10087.425ENSPNAG00000019909puf60a9987.625Pygocentrus_nattereri
ENSPLAG00000010754puf60b10086.564ENSRNOG00000009960Puf609285.413Rattus_norvegicus
ENSPLAG00000010754puf60b10085.988ENSRBIG00000035274PUF609784.837Rhinopithecus_bieti
ENSPLAG00000010754puf60b10085.988ENSRROG00000029360PUF609884.837Rhinopithecus_roxellana
ENSPLAG00000010754puf60b10084.645ENSSBOG00000027089PUF609783.493Saimiri_boliviensis_boliviensis
ENSPLAG00000010754puf60b9085.714ENSSHAG00000006668PUF608984.435Sarcophilus_harrisii
ENSPLAG00000010754puf60b10083.044ENSSFOG00015019619puf60b9985.772Scleropages_formosus
ENSPLAG00000010754puf60b9589.817ENSSFOG00015019371puf60a9889.817Scleropages_formosus
ENSPLAG00000010754puf60b7698.976ENSSMAG00000016381puf60b7598.976Scophthalmus_maximus
ENSPLAG00000010754puf60b9783.735ENSSDUG00000007048-9584.569Seriola_dumerili
ENSPLAG00000010754puf60b10096.374ENSSDUG00000009935puf60b9996.374Seriola_dumerili
ENSPLAG00000010754puf60b10081.538ENSSLDG00000007366-9981.766Seriola_lalandi_dorsalis
ENSPLAG00000010754puf60b10098.441ENSSLDG00000024011puf60b10095.825Seriola_lalandi_dorsalis
ENSPLAG00000010754puf60b6578.171ENSSPUG00000013518PUF609278.788Sphenodon_punctatus
ENSPLAG00000010754puf60b10083.333ENSSPAG00000020285-10083.721Stegastes_partitus
ENSPLAG00000010754puf60b10095.446ENSSPAG00000012144puf60b10095.446Stegastes_partitus
ENSPLAG00000010754puf60b10086.180ENSSSCG00000038800PUF609784.524Sus_scrofa
ENSPLAG00000010754puf60b10083.716ENSTGUG00000012797-9983.077Taeniopygia_guttata
ENSPLAG00000010754puf60b10081.690ENSTRUG00000008843-10081.087Takifugu_rubripes
ENSPLAG00000010754puf60b10097.466ENSTRUG00000005420puf60b10094.877Takifugu_rubripes
ENSPLAG00000010754puf60b10097.271ENSTNIG00000013675puf60b9997.271Tetraodon_nigroviridis
ENSPLAG00000010754puf60b10079.727ENSTNIG00000003069-9979.922Tetraodon_nigroviridis
ENSPLAG00000010754puf60b7766.382ENSTBEG00000001899-10067.236Tupaia_belangeri
ENSPLAG00000010754puf60b5786.254ENSTBEG00000002751-9785.911Tupaia_belangeri
ENSPLAG00000010754puf60b10084.837ENSTTRG00000017088PUF6010084.069Tursiops_truncatus
ENSPLAG00000010754puf60b10086.180ENSUAMG00000024917PUF609785.029Ursus_americanus
ENSPLAG00000010754puf60b10081.190ENSUMAG00000000272PUF609279.846Ursus_maritimus
ENSPLAG00000010754puf60b10086.180ENSVVUG00000022527PUF6010085.029Vulpes_vulpes
ENSPLAG00000010754puf60b10083.877ENSXETG00000012469puf609882.540Xenopus_tropicalis
ENSPLAG00000010754puf60b100100.000ENSXCOG00000012355puf60b100100.000Xiphophorus_couchianus
ENSPLAG00000010754puf60b10081.727ENSXMAG00000010507-9881.526Xiphophorus_maculatus
ENSPLAG00000010754puf60b100100.000ENSXMAG00000001862puf60b100100.000Xiphophorus_maculatus

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