EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000010794 (Gene tree)
Gene ID: 106956982
Gene Symbol: r3hcc1
Alias: -
Full Name: R3H and coiled-coil domain-containing protein 1-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 5595 bases
Position: chrKQ546176.1:169356-174950
Accession: 106956982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000008261	R3H	PF01424.22	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000003177	-	2457	XM_015048136	ENSPLAP00000008261	449 (aa)	XP_014903622	-

Gene Model

Click here to download ENSPLAG00000010794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000010794's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000010794	r3hcc1	90	33.562	ENSG00000104679	R3HCC1	100	41.860	Homo_sapiens
ENSPLAG00000010794	r3hcc1	91	56.068	ENSAPOG00000003616	r3hcc1	93	56.763	Acanthochromis_polyacanthus
ENSPLAG00000010794	r3hcc1	91	35.586	ENSAMEG00000002963	R3HCC1	89	35.780	Ailuropoda_melanoleuca
ENSPLAG00000010794	r3hcc1	92	53.778	ENSACIG00000017144	r3hcc1	98	62.112	Amphilophus_citrinellus
ENSPLAG00000010794	r3hcc1	90	57.317	ENSAOCG00000003945	r3hcc1	100	57.767	Amphiprion_ocellaris
ENSPLAG00000010794	r3hcc1	90	57.767	ENSAPEG00000003613	r3hcc1	100	58.010	Amphiprion_percula
ENSPLAG00000010794	r3hcc1	85	60.614	ENSATEG00000023860	r3hcc1	100	60.934	Anabas_testudineus
ENSPLAG00000010794	r3hcc1	91	35.909	ENSACAG00000016627	R3HCC1	96	36.902	Anolis_carolinensis
ENSPLAG00000010794	r3hcc1	90	33.172	ENSANAG00000036169	R3HCC1	96	33.172	Aotus_nancymaae
ENSPLAG00000010794	r3hcc1	90	34.259	ENSBTAG00000025830	R3HCC1	93	34.259	Bos_taurus
ENSPLAG00000010794	r3hcc1	90	33.790	ENSCJAG00000020118	R3HCC1	96	33.575	Callithrix_jacchus
ENSPLAG00000010794	r3hcc1	90	34.783	ENSCAFG00000009210	R3HCC1	92	35.349	Canis_familiaris
ENSPLAG00000010794	r3hcc1	78	33.245	ENSCAFG00020012870	R3HCC1	85	33.333	Canis_lupus_dingo
ENSPLAG00000010794	r3hcc1	90	34.842	ENSCHIG00000009107	R3HCC1	96	34.615	Capra_hircus
ENSPLAG00000010794	r3hcc1	90	34.562	ENSTSYG00000000511	R3HCC1	75	34.491	Carlito_syrichta
ENSPLAG00000010794	r3hcc1	54	40.541	ENSCAPG00000015813	R3HCC1	56	40.541	Cavia_aperea
ENSPLAG00000010794	r3hcc1	68	41.718	ENSCPOG00000009696	R3HCC1	61	45.390	Cavia_porcellus
ENSPLAG00000010794	r3hcc1	90	33.820	ENSCCAG00000037811	R3HCC1	96	34.063	Cebus_capucinus
ENSPLAG00000010794	r3hcc1	90	33.820	ENSCATG00000032971	R3HCC1	96	34.307	Cercocebus_atys
ENSPLAG00000010794	r3hcc1	90	36.092	ENSCLAG00000015556	R3HCC1	81	35.033	Chinchilla_lanigera
ENSPLAG00000010794	r3hcc1	90	32.222	ENSCSAG00000016250	R3HCC1	89	34.404	Chlorocebus_sabaeus
ENSPLAG00000010794	r3hcc1	90	32.494	ENSCHOG00000000396	R3HCC1	93	34.932	Choloepus_hoffmanni
ENSPLAG00000010794	r3hcc1	90	34.932	ENSCANG00000029441	R3HCC1	96	34.146	Colobus_angolensis_palliatus
ENSPLAG00000010794	r3hcc1	75	44.231	ENSCGRG00001014977	R3hcc1	96	32.766	Cricetulus_griseus_chok1gshd
ENSPLAG00000010794	r3hcc1	75	44.231	ENSCGRG00000004454	R3hcc1	96	32.766	Cricetulus_griseus_crigri
ENSPLAG00000010794	r3hcc1	90	56.161	ENSCSEG00000005748	r3hcc1	99	56.132	Cynoglossus_semilaevis
ENSPLAG00000010794	r3hcc1	78	64.789	ENSCVAG00000002640	r3hcc1	96	64.972	Cyprinodon_variegatus
ENSPLAG00000010794	r3hcc1	91	41.827	ENSDARG00000099593	r3hcc1	98	41.827	Danio_rerio
ENSPLAG00000010794	r3hcc1	90	33.333	ENSDNOG00000007168	R3HCC1	89	33.560	Dasypus_novemcinctus
ENSPLAG00000010794	r3hcc1	90	35.747	ENSEASG00005018782	R3HCC1	53	45.775	Equus_asinus_asinus
ENSPLAG00000010794	r3hcc1	90	36.322	ENSECAG00000025013	R3HCC1	94	36.092	Equus_caballus
ENSPLAG00000010794	r3hcc1	90	34.247	ENSEEUG00000011918	R3HCC1	93	34.318	Erinaceus_europaeus
ENSPLAG00000010794	r3hcc1	87	47.002	ENSELUG00000023650	r3hcc1	99	47.087	Esox_lucius
ENSPLAG00000010794	r3hcc1	90	36.342	ENSFCAG00000012395	R3HCC1	93	36.806	Felis_catus
ENSPLAG00000010794	r3hcc1	70	35.714	ENSFALG00000001646	R3HCC1	51	38.732	Ficedula_albicollis
ENSPLAG00000010794	r3hcc1	89	38.000	ENSGMOG00000017590	-	98	36.500	Gadus_morhua
ENSPLAG00000010794	r3hcc1	99	91.759	ENSGAFG00000008747	-	99	91.759	Gambusia_affinis
ENSPLAG00000010794	r3hcc1	91	56.490	ENSGACG00000008447	r3hcc1	96	56.490	Gasterosteus_aculeatus
ENSPLAG00000010794	r3hcc1	90	33.577	ENSGGOG00000013817	R3HCC1	96	34.307	Gorilla_gorilla
ENSPLAG00000010794	r3hcc1	67	84.337	ENSHBUG00000022250	-	88	84.337	Haplochromis_burtoni
ENSPLAG00000010794	r3hcc1	92	33.787	ENSHGLG00000010517	R3HCC1	90	35.147	Heterocephalus_glaber_female
ENSPLAG00000010794	r3hcc1	92	33.787	ENSHGLG00100006388	R3HCC1	90	35.147	Heterocephalus_glaber_male
ENSPLAG00000010794	r3hcc1	92	53.237	ENSHCOG00000011745	r3hcc1	95	54.374	Hippocampus_comes
ENSPLAG00000010794	r3hcc1	92	47.129	ENSIPUG00000024504	r3hcc1	87	47.143	Ictalurus_punctatus
ENSPLAG00000010794	r3hcc1	65	45.270	ENSSTOG00000027130	R3HCC1	65	46.809	Ictidomys_tridecemlineatus
ENSPLAG00000010794	r3hcc1	66	43.590	ENSJJAG00000013075	R3hcc1	97	33.898	Jaculus_jaculus
ENSPLAG00000010794	r3hcc1	87	66.834	ENSKMAG00000000286	r3hcc1	100	66.337	Kryptolebias_marmoratus
ENSPLAG00000010794	r3hcc1	71	45.752	ENSLACG00000011894	R3HCC1	72	46.309	Latimeria_chalumnae
ENSPLAG00000010794	r3hcc1	96	42.637	ENSLOCG00000015442	r3hcc1	98	43.467	Lepisosteus_oculatus
ENSPLAG00000010794	r3hcc1	64	46.099	ENSLAFG00000016137	R3HCC1	58	46.099	Loxodonta_africana
ENSPLAG00000010794	r3hcc1	90	34.063	ENSMFAG00000032894	R3HCC1	96	34.550	Macaca_fascicularis
ENSPLAG00000010794	r3hcc1	90	33.902	ENSMMUG00000016655	R3HCC1	96	34.390	Macaca_mulatta
ENSPLAG00000010794	r3hcc1	90	35.036	ENSMNEG00000043283	R3HCC1	96	34.793	Macaca_nemestrina
ENSPLAG00000010794	r3hcc1	90	35.523	ENSMLEG00000030147	R3HCC1	96	35.280	Mandrillus_leucophaeus
ENSPLAG00000010794	r3hcc1	87	58.168	ENSMAMG00000018146	r3hcc1	100	59.901	Mastacembelus_armatus
ENSPLAG00000010794	r3hcc1	90	34.660	ENSMGAG00000001356	R3HCC1	89	34.426	Meleagris_gallopavo
ENSPLAG00000010794	r3hcc1	63	46.429	ENSMAUG00000016096	R3hcc1	96	32.684	Mesocricetus_auratus
ENSPLAG00000010794	r3hcc1	90	34.940	ENSMICG00000011146	R3HCC1	96	34.940	Microcebus_murinus
ENSPLAG00000010794	r3hcc1	64	44.828	ENSMOCG00000018508	R3hcc1	96	32.008	Microtus_ochrogaster
ENSPLAG00000010794	r3hcc1	87	55.932	ENSMALG00000000731	r3hcc1	100	58.477	Monopterus_albus
ENSPLAG00000010794	r3hcc1	64	42.069	MGP_CAROLIEiJ_G0019467	R3hcc1	65	40.523	Mus_caroli
ENSPLAG00000010794	r3hcc1	65	41.892	ENSMUSG00000034194	R3hcc1	59	42.958	Mus_musculus
ENSPLAG00000010794	r3hcc1	65	41.781	MGP_PahariEiJ_G0030484	R3hcc1	58	42.254	Mus_pahari
ENSPLAG00000010794	r3hcc1	65	41.892	MGP_SPRETEiJ_G0020359	R3hcc1	97	31.393	Mus_spretus
ENSPLAG00000010794	r3hcc1	90	34.607	ENSMPUG00000003457	R3HCC1	84	34.305	Mustela_putorius_furo
ENSPLAG00000010794	r3hcc1	91	33.853	ENSMLUG00000000266	R3HCC1	89	35.092	Myotis_lucifugus
ENSPLAG00000010794	r3hcc1	63	45.390	ENSNGAG00000016747	R3hcc1	96	33.407	Nannospalax_galili
ENSPLAG00000010794	r3hcc1	77	85.714	ENSNBRG00000016975	-	85	63.415	Neolamprologus_brichardi
ENSPLAG00000010794	r3hcc1	91	32.353	ENSNLEG00000015944	R3HCC1	85	32.847	Nomascus_leucogenys
ENSPLAG00000010794	r3hcc1	91	35.550	ENSMEUG00000010587	R3HCC1	97	35.780	Notamacropus_eugenii
ENSPLAG00000010794	r3hcc1	90	34.713	ENSOPRG00000013390	R3HCC1	92	34.186	Ochotona_princeps
ENSPLAG00000010794	r3hcc1	90	33.405	ENSODEG00000007529	R3HCC1	97	33.263	Octodon_degus
ENSPLAG00000010794	r3hcc1	90	33.953	ENSOANG00000013877	R3HCC1	94	34.186	Ornithorhynchus_anatinus
ENSPLAG00000010794	r3hcc1	87	52.658	ENSORLG00000016816	r3hcc1	100	52.152	Oryzias_latipes
ENSPLAG00000010794	r3hcc1	87	52.152	ENSORLG00020012005	r3hcc1	100	51.646	Oryzias_latipes_hni
ENSPLAG00000010794	r3hcc1	87	53.165	ENSORLG00015007018	r3hcc1	100	52.658	Oryzias_latipes_hsok
ENSPLAG00000010794	r3hcc1	87	54.177	ENSOMEG00000000816	r3hcc1	100	54.177	Oryzias_melastigma
ENSPLAG00000010794	r3hcc1	91	33.484	ENSOGAG00000001291	R3HCC1	90	34.989	Otolemur_garnettii
ENSPLAG00000010794	r3hcc1	90	34.152	ENSOARG00000010146	R3HCC1	94	33.713	Ovis_aries
ENSPLAG00000010794	r3hcc1	90	33.562	ENSPPAG00000033165	R3HCC1	96	33.573	Pan_paniscus
ENSPLAG00000010794	r3hcc1	90	36.175	ENSPPRG00000002522	R3HCC1	97	36.891	Panthera_pardus
ENSPLAG00000010794	r3hcc1	83	36.409	ENSPTIG00000011230	R3HCC1	93	37.186	Panthera_tigris_altaica
ENSPLAG00000010794	r3hcc1	90	33.562	ENSPTRG00000020076	R3HCC1	96	33.333	Pan_troglodytes
ENSPLAG00000010794	r3hcc1	90	34.063	ENSPANG00000000453	R3HCC1	96	34.793	Papio_anubis
ENSPLAG00000010794	r3hcc1	83	46.524	ENSPKIG00000014426	-	94	45.989	Paramormyrops_kingsleyae
ENSPLAG00000010794	r3hcc1	83	45.526	ENSPKIG00000020397	-	95	45.503	Paramormyrops_kingsleyae
ENSPLAG00000010794	r3hcc1	90	35.714	ENSPSIG00000017664	R3HCC1	96	36.782	Pelodiscus_sinensis
ENSPLAG00000010794	r3hcc1	62	58.741	ENSPMGG00000007792	r3hcc1	61	58.741	Periophthalmus_magnuspinnatus
ENSPLAG00000010794	r3hcc1	69	42.484	ENSPEMG00000007118	R3hcc1	96	33.192	Peromyscus_maniculatus_bairdii
ENSPLAG00000010794	r3hcc1	82	32.750	ENSPCIG00000022718	-	81	32.000	Phascolarctos_cinereus
ENSPLAG00000010794	r3hcc1	100	98.441	ENSPFOG00000022301	r3hcc1	100	98.441	Poecilia_formosa
ENSPLAG00000010794	r3hcc1	100	98.441	ENSPMEG00000022515	r3hcc1	100	98.441	Poecilia_mexicana
ENSPLAG00000010794	r3hcc1	99	94.878	ENSPREG00000000713	r3hcc1	99	94.878	Poecilia_reticulata
ENSPLAG00000010794	r3hcc1	83	33.582	ENSPPYG00000018436	R3HCC1	96	33.747	Pongo_abelii
ENSPLAG00000010794	r3hcc1	63	45.714	ENSPCAG00000012229	R3HCC1	63	45.714	Procavia_capensis
ENSPLAG00000010794	r3hcc1	90	33.494	ENSPCOG00000027554	R3HCC1	96	33.494	Propithecus_coquereli
ENSPLAG00000010794	r3hcc1	90	33.718	ENSPVAG00000009829	R3HCC1	93	33.487	Pteropus_vampyrus
ENSPLAG00000010794	r3hcc1	88	47.089	ENSPNAG00000023875	r3hcc1	99	47.487	Pygocentrus_nattereri
ENSPLAG00000010794	r3hcc1	90	34.633	ENSRBIG00000028045	R3HCC1	96	34.146	Rhinopithecus_bieti
ENSPLAG00000010794	r3hcc1	90	34.783	ENSRROG00000031126	R3HCC1	96	34.146	Rhinopithecus_roxellana
ENSPLAG00000010794	r3hcc1	90	32.957	ENSSBOG00000022590	R3HCC1	96	33.710	Saimiri_boliviensis_boliviensis
ENSPLAG00000010794	r3hcc1	51	50.575	ENSSHAG00000016526	-	55	45.631	Sarcophilus_harrisii
ENSPLAG00000010794	r3hcc1	76	56.044	ENSSFOG00015013507	r3hcc1	100	44.444	Scleropages_formosus
ENSPLAG00000010794	r3hcc1	87	61.481	ENSSMAG00000008647	r3hcc1	100	61.481	Scophthalmus_maximus
ENSPLAG00000010794	r3hcc1	92	65.187	ENSSDUG00000022786	r3hcc1	99	66.355	Seriola_dumerili
ENSPLAG00000010794	r3hcc1	92	64.953	ENSSLDG00000019031	r3hcc1	99	66.121	Seriola_lalandi_dorsalis
ENSPLAG00000010794	r3hcc1	90	59.036	ENSSPAG00000013497	r3hcc1	100	59.036	Stegastes_partitus
ENSPLAG00000010794	r3hcc1	90	31.651	ENSSSCG00000037347	-	87	31.422	Sus_scrofa
ENSPLAG00000010794	r3hcc1	90	34.318	ENSSSCG00000039915	-	90	34.091	Sus_scrofa
ENSPLAG00000010794	r3hcc1	90	50.122	ENSTRUG00000015880	r3hcc1	99	49.633	Takifugu_rubripes
ENSPLAG00000010794	r3hcc1	91	32.816	ENSTTRG00000012247	R3HCC1	95	33.183	Tursiops_truncatus
ENSPLAG00000010794	r3hcc1	90	33.485	ENSUAMG00000007344	R3HCC1	96	34.943	Ursus_americanus
ENSPLAG00000010794	r3hcc1	95	33.833	ENSVVUG00000005056	R3HCC1	92	34.642	Vulpes_vulpes
ENSPLAG00000010794	r3hcc1	84	87.863	ENSXCOG00000017626	r3hcc1	86	87.863	Xiphophorus_couchianus
ENSPLAG00000010794	r3hcc1	99	92.873	ENSXMAG00000018375	r3hcc1	99	92.873	Xiphophorus_maculatus