EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000011051 (Gene tree)
Gene ID: 106948331
Gene Symbol: ptcd1
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4550 bases
Position: chrKQ545598.1:71833-76382
Accession: 106948331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000024672	PPR	PF01535.20	5.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000002795	-	2854	XM_015033937	ENSPLAP00000024672	697 (aa)	XP_014889423	UPI00072DAB1E

Gene Model

Click here to download ENSPLAG00000011051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011051's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011051	ptcd1	85	46.645	ENSG00000106246	PTCD1	86	45.990	Homo_sapiens
ENSPLAG00000011051	ptcd1	85	46.645	ENSG00000248919	ATP5MF-PTCD1	80	45.990	Homo_sapiens
ENSPLAG00000011051	ptcd1	88	62.641	ENSAPOG00000010679	ptcd1	96	62.480	Acanthochromis_polyacanthus
ENSPLAG00000011051	ptcd1	82	49.327	ENSAMEG00000006224	-	78	49.158	Ailuropoda_melanoleuca
ENSPLAG00000011051	ptcd1	88	70.275	ENSACIG00000017861	ptcd1	90	70.340	Amphilophus_citrinellus
ENSPLAG00000011051	ptcd1	87	63.826	ENSAOCG00000022617	ptcd1	93	63.023	Amphiprion_ocellaris
ENSPLAG00000011051	ptcd1	98	62.356	ENSAOCG00000020741	-	98	61.638	Amphiprion_ocellaris
ENSPLAG00000011051	ptcd1	98	61.891	ENSAPEG00000022632	ptcd1	98	61.175	Amphiprion_percula
ENSPLAG00000011051	ptcd1	90	66.981	ENSATEG00000007016	ptcd1	91	66.616	Anabas_testudineus
ENSPLAG00000011051	ptcd1	82	47.521	ENSAPLG00000006862	-	86	48.807	Anas_platyrhynchos
ENSPLAG00000011051	ptcd1	85	46.515	ENSACAG00000012871	-	80	46.569	Anolis_carolinensis
ENSPLAG00000011051	ptcd1	82	47.333	ENSANAG00000035790	-	86	47.264	Aotus_nancymaae
ENSPLAG00000011051	ptcd1	99	65.638	ENSACLG00000002824	ptcd1	99	65.498	Astatotilapia_calliptera
ENSPLAG00000011051	ptcd1	87	48.926	ENSAMXG00000037292	ptcd1	86	50.894	Astyanax_mexicanus
ENSPLAG00000011051	ptcd1	84	47.769	ENSBTAG00000020440	-	74	47.769	Bos_taurus
ENSPLAG00000011051	ptcd1	82	47.731	ENSCJAG00000015815	-	84	47.659	Callithrix_jacchus
ENSPLAG00000011051	ptcd1	86	48.089	ENSCAFG00000015055	-	83	47.452	Canis_familiaris
ENSPLAG00000011051	ptcd1	86	48.089	ENSCAFG00020014480	-	83	47.452	Canis_lupus_dingo
ENSPLAG00000011051	ptcd1	89	47.476	ENSCHIG00000027000	-	89	47.161	Capra_hircus
ENSPLAG00000011051	ptcd1	82	46.745	ENSTSYG00000029495	-	86	46.254	Carlito_syrichta
ENSPLAG00000011051	ptcd1	82	47.395	ENSCAPG00000014660	-	90	47.020	Cavia_aperea
ENSPLAG00000011051	ptcd1	82	48.067	ENSCPOG00000001780	-	89	46.154	Cavia_porcellus
ENSPLAG00000011051	ptcd1	82	48.485	ENSCCAG00000034025	-	84	48.409	Cebus_capucinus
ENSPLAG00000011051	ptcd1	82	48.567	ENSCATG00000040859	-	84	48.490	Cercocebus_atys
ENSPLAG00000011051	ptcd1	82	48.744	ENSCLAG00000006354	-	84	48.667	Chinchilla_lanigera
ENSPLAG00000011051	ptcd1	78	46.986	ENSCSAG00000017794	-	82	46.561	Chlorocebus_sabaeus
ENSPLAG00000011051	ptcd1	85	45.212	ENSCPBG00000020866	-	85	45.055	Chrysemys_picta_bellii
ENSPLAG00000011051	ptcd1	84	46.305	ENSCANG00000023441	-	86	46.305	Colobus_angolensis_palliatus
ENSPLAG00000011051	ptcd1	84	47.690	ENSCGRG00001023686	Ptcd1	83	48.403	Cricetulus_griseus_chok1gshd
ENSPLAG00000011051	ptcd1	84	47.690	ENSCGRG00000015031	Ptcd1	83	48.403	Cricetulus_griseus_crigri
ENSPLAG00000011051	ptcd1	92	60.961	ENSCSEG00000002378	ptcd1	93	60.451	Cynoglossus_semilaevis
ENSPLAG00000011051	ptcd1	95	74.962	ENSCVAG00000003621	ptcd1	98	75.385	Cyprinodon_variegatus
ENSPLAG00000011051	ptcd1	99	74.893	ENSCVAG00000015826	ptcd1	98	74.180	Cyprinodon_variegatus
ENSPLAG00000011051	ptcd1	92	47.839	ENSDARG00000076176	ptcd1	94	48.588	Danio_rerio
ENSPLAG00000011051	ptcd1	82	48.495	ENSDNOG00000009957	-	86	47.735	Dasypus_novemcinctus
ENSPLAG00000011051	ptcd1	82	46.610	ENSDORG00000000740	Ptcd1	86	47.049	Dipodomys_ordii
ENSPLAG00000011051	ptcd1	81	38.854	ENSEBUG00000014515	ptcd1	93	39.286	Eptatretus_burgeri
ENSPLAG00000011051	ptcd1	82	49.256	ENSEASG00005002480	-	84	48.943	Equus_asinus_asinus
ENSPLAG00000011051	ptcd1	82	49.421	ENSECAG00000016617	-	84	49.106	Equus_caballus
ENSPLAG00000011051	ptcd1	92	54.758	ENSELUG00000016517	ptcd1	85	56.986	Esox_lucius
ENSPLAG00000011051	ptcd1	82	49.246	ENSFCAG00000015069	-	84	49.246	Felis_catus
ENSPLAG00000011051	ptcd1	89	43.628	ENSFALG00000013803	-	91	44.042	Ficedula_albicollis
ENSPLAG00000011051	ptcd1	82	48.918	ENSFDAG00000006393	-	84	48.675	Fukomys_damarensis
ENSPLAG00000011051	ptcd1	79	78.700	ENSFHEG00000012491	ptcd1	95	78.520	Fundulus_heteroclitus
ENSPLAG00000011051	ptcd1	87	62.298	ENSGMOG00000007639	ptcd1	98	61.650	Gadus_morhua
ENSPLAG00000011051	ptcd1	82	46.382	ENSGALG00000004711	-	78	48.294	Gallus_gallus
ENSPLAG00000011051	ptcd1	99	90.272	ENSGAFG00000013175	ptcd1	100	90.701	Gambusia_affinis
ENSPLAG00000011051	ptcd1	90	67.453	ENSGACG00000016607	ptcd1	97	67.350	Gasterosteus_aculeatus
ENSPLAG00000011051	ptcd1	79	46.737	ENSGAGG00000021832	-	84	46.299	Gopherus_agassizii
ENSPLAG00000011051	ptcd1	85	46.645	ENSGGOG00000015123	-	86	45.990	Gorilla_gorilla
ENSPLAG00000011051	ptcd1	99	65.077	ENSHBUG00000018275	ptcd1	91	68.453	Haplochromis_burtoni
ENSPLAG00000011051	ptcd1	87	46.948	ENSHGLG00000017621	-	89	46.948	Heterocephalus_glaber_female
ENSPLAG00000011051	ptcd1	87	46.948	ENSHGLG00100007218	-	89	46.948	Heterocephalus_glaber_male
ENSPLAG00000011051	ptcd1	91	59.277	ENSHCOG00000010784	ptcd1	91	58.750	Hippocampus_comes
ENSPLAG00000011051	ptcd1	84	48.179	ENSSTOG00000001682	-	85	48.675	Ictidomys_tridecemlineatus
ENSPLAG00000011051	ptcd1	88	45.622	ENSJJAG00000000319	Ptcd1	89	45.827	Jaculus_jaculus
ENSPLAG00000011051	ptcd1	98	68.633	ENSKMAG00000008708	ptcd1	98	68.201	Kryptolebias_marmoratus
ENSPLAG00000011051	ptcd1	99	61.708	ENSLBEG00000008061	ptcd1	99	61.411	Labrus_bergylta
ENSPLAG00000011051	ptcd1	84	49.261	ENSLACG00000011172	ptcd1	82	49.239	Latimeria_chalumnae
ENSPLAG00000011051	ptcd1	85	50.078	ENSLOCG00000004833	ptcd1	93	50.084	Lepisosteus_oculatus
ENSPLAG00000011051	ptcd1	82	47.906	ENSLAFG00000002588	-	76	48.991	Loxodonta_africana
ENSPLAG00000011051	ptcd1	82	47.475	ENSMFAG00000041324	-	84	47.404	Macaca_fascicularis
ENSPLAG00000011051	ptcd1	82	47.306	ENSMMUG00000030408	-	84	47.236	Macaca_mulatta
ENSPLAG00000011051	ptcd1	82	48.567	ENSMNEG00000043786	-	84	48.490	Macaca_nemestrina
ENSPLAG00000011051	ptcd1	82	35.434	ENSMLEG00000031179	-	81	35.424	Mandrillus_leucophaeus
ENSPLAG00000011051	ptcd1	99	63.202	ENSMAMG00000007623	ptcd1	97	63.202	Mastacembelus_armatus
ENSPLAG00000011051	ptcd1	99	65.778	ENSMZEG00005012722	ptcd1	99	65.638	Maylandia_zebra
ENSPLAG00000011051	ptcd1	81	47.333	ENSMGAG00000004211	-	72	48.370	Meleagris_gallopavo
ENSPLAG00000011051	ptcd1	82	47.049	ENSMICG00000017428	-	85	46.854	Microcebus_murinus
ENSPLAG00000011051	ptcd1	99	64.374	ENSMMOG00000020243	ptcd1	99	63.961	Mola_mola
ENSPLAG00000011051	ptcd1	85	45.455	ENSMODG00000001350	-	82	46.305	Monodelphis_domestica
ENSPLAG00000011051	ptcd1	99	61.944	ENSMALG00000018442	ptcd1	99	61.925	Monopterus_albus
ENSPLAG00000011051	ptcd1	88	45.031	MGP_CAROLIEiJ_G0028011	Ptcd1	91	45.031	Mus_caroli
ENSPLAG00000011051	ptcd1	88	44.684	ENSMUSG00000029624	Ptcd1	91	45.497	Mus_musculus
ENSPLAG00000011051	ptcd1	88	45.412	MGP_PahariEiJ_G0024580	Ptcd1	91	45.412	Mus_pahari
ENSPLAG00000011051	ptcd1	88	44.684	MGP_SPRETEiJ_G0029012	Ptcd1	91	45.568	Mus_spretus
ENSPLAG00000011051	ptcd1	92	45.588	ENSMPUG00000016518	-	95	46.165	Mustela_putorius_furo
ENSPLAG00000011051	ptcd1	82	48.911	ENSMLUG00000010994	-	78	49.663	Myotis_lucifugus
ENSPLAG00000011051	ptcd1	97	64.327	ENSNBRG00000010079	ptcd1	95	67.428	Neolamprologus_brichardi
ENSPLAG00000011051	ptcd1	72	46.286	ENSNLEG00000011060	-	88	46.780	Nomascus_leucogenys
ENSPLAG00000011051	ptcd1	84	45.964	ENSMEUG00000006930	-	86	45.799	Notamacropus_eugenii
ENSPLAG00000011051	ptcd1	72	58.621	ENSOPRG00000013647	-	68	69.737	Ochotona_princeps
ENSPLAG00000011051	ptcd1	86	67.875	ENSONIG00000003168	ptcd1	100	67.710	Oreochromis_niloticus
ENSPLAG00000011051	ptcd1	79	46.435	ENSOANG00000007728	-	74	45.913	Ornithorhynchus_anatinus
ENSPLAG00000011051	ptcd1	87	46.411	ENSOCUG00000010584	-	84	46.809	Oryctolagus_cuniculus
ENSPLAG00000011051	ptcd1	89	70.418	ENSORLG00000009275	ptcd1	87	71.070	Oryzias_latipes
ENSPLAG00000011051	ptcd1	96	67.013	ENSORLG00020000988	ptcd1	94	67.488	Oryzias_latipes_hni
ENSPLAG00000011051	ptcd1	96	66.322	ENSORLG00015010557	ptcd1	94	66.769	Oryzias_latipes_hsok
ENSPLAG00000011051	ptcd1	94	67.362	ENSOMEG00000020627	ptcd1	96	68.092	Oryzias_melastigma
ENSPLAG00000011051	ptcd1	82	46.812	ENSOGAG00000010877	-	85	46.745	Otolemur_garnettii
ENSPLAG00000011051	ptcd1	89	42.462	ENSOARG00000018676	-	89	42.154	Ovis_aries
ENSPLAG00000011051	ptcd1	82	46.970	ENSPPAG00000036024	-	86	45.827	Pan_paniscus
ENSPLAG00000011051	ptcd1	82	49.581	ENSPPRG00000003478	-	84	49.581	Panthera_pardus
ENSPLAG00000011051	ptcd1	82	47.138	ENSPTRG00000019452	-	86	45.990	Pan_troglodytes
ENSPLAG00000011051	ptcd1	82	47.643	ENSPANG00000016730	-	84	48.658	Papio_anubis
ENSPLAG00000011051	ptcd1	84	49.917	ENSPKIG00000014215	ptcd1	85	51.361	Paramormyrops_kingsleyae
ENSPLAG00000011051	ptcd1	82	46.141	ENSPSIG00000011184	-	92	46.486	Pelodiscus_sinensis
ENSPLAG00000011051	ptcd1	71	41.120	ENSPMAG00000009667	ptcd1	99	41.120	Petromyzon_marinus
ENSPLAG00000011051	ptcd1	82	46.154	ENSPCIG00000024778	-	83	44.976	Phascolarctos_cinereus
ENSPLAG00000011051	ptcd1	100	98.857	ENSPFOG00000004458	ptcd1	100	98.857	Poecilia_formosa
ENSPLAG00000011051	ptcd1	100	97.571	ENSPMEG00000020547	ptcd1	100	97.571	Poecilia_mexicana
ENSPLAG00000011051	ptcd1	100	93.400	ENSPREG00000000059	ptcd1	100	93.113	Poecilia_reticulata
ENSPLAG00000011051	ptcd1	84	46.656	ENSPPYG00000017377	-	91	46.809	Pongo_abelii
ENSPLAG00000011051	ptcd1	72	61.600	ENSPCAG00000001852	-	81	61.600	Procavia_capensis
ENSPLAG00000011051	ptcd1	82	47.892	ENSPCOG00000018596	-	85	47.682	Propithecus_coquereli
ENSPLAG00000011051	ptcd1	56	54.138	ENSPVAG00000007529	-	53	61.674	Pteropus_vampyrus
ENSPLAG00000011051	ptcd1	92	68.606	ENSPNYG00000019993	ptcd1	91	68.453	Pundamilia_nyererei
ENSPLAG00000011051	ptcd1	90	50.855	ENSPNAG00000014931	ptcd1	96	48.968	Pygocentrus_nattereri
ENSPLAG00000011051	ptcd1	84	47.438	ENSRNOG00000000987	Ptcd1	85	47.819	Rattus_norvegicus
ENSPLAG00000011051	ptcd1	84	46.798	ENSRBIG00000043393	-	86	46.798	Rhinopithecus_bieti
ENSPLAG00000011051	ptcd1	84	47.862	ENSRROG00000036420	-	86	47.862	Rhinopithecus_roxellana
ENSPLAG00000011051	ptcd1	82	47.819	ENSSBOG00000024114	-	84	46.912	Saimiri_boliviensis_boliviensis
ENSPLAG00000011051	ptcd1	85	47.200	ENSSHAG00000011376	-	91	47.855	Sarcophilus_harrisii
ENSPLAG00000011051	ptcd1	84	51.140	ENSSFOG00015007909	ptcd1	81	51.821	Scleropages_formosus
ENSPLAG00000011051	ptcd1	89	65.714	ENSSMAG00000000218	ptcd1	99	65.197	Scophthalmus_maximus
ENSPLAG00000011051	ptcd1	96	63.610	ENSSDUG00000015671	ptcd1	96	66.212	Seriola_dumerili
ENSPLAG00000011051	ptcd1	96	63.728	ENSSLDG00000014261	ptcd1	94	66.314	Seriola_lalandi_dorsalis
ENSPLAG00000011051	ptcd1	88	44.511	ENSSPUG00000003540	-	89	44.060	Sphenodon_punctatus
ENSPLAG00000011051	ptcd1	99	64.706	ENSSPAG00000011049	ptcd1	98	64.706	Stegastes_partitus
ENSPLAG00000011051	ptcd1	82	48.908	ENSSSCG00000007622	-	89	48.829	Sus_scrofa
ENSPLAG00000011051	ptcd1	82	46.508	ENSTGUG00000007563	-	90	47.818	Taeniopygia_guttata
ENSPLAG00000011051	ptcd1	90	66.410	ENSTRUG00000013471	ptcd1	90	66.009	Takifugu_rubripes
ENSPLAG00000011051	ptcd1	90	65.785	ENSTNIG00000008271	ptcd1	90	67.042	Tetraodon_nigroviridis
ENSPLAG00000011051	ptcd1	82	48.013	ENSTBEG00000011021	-	86	47.488	Tupaia_belangeri
ENSPLAG00000011051	ptcd1	84	47.541	ENSTTRG00000003006	-	85	47.541	Tursiops_truncatus
ENSPLAG00000011051	ptcd1	82	48.653	ENSUAMG00000008049	-	84	48.485	Ursus_americanus
ENSPLAG00000011051	ptcd1	82	49.749	ENSVVUG00000008836	-	84	49.079	Vulpes_vulpes
ENSPLAG00000011051	ptcd1	84	47.068	ENSXETG00000009891	ptcd1	87	46.429	Xenopus_tropicalis
ENSPLAG00000011051	ptcd1	99	91.559	ENSXMAG00000015540	ptcd1	100	91.559	Xiphophorus_maculatus