EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000011079 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 5334 bases
Position: chrKQ548060.1:57699-63032
Accession: 106939090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000008513	YTH	PF04146.15	2.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000002762	-	2376	XM_015021379	ENSPLAP00000008513	471 (aa)	XP_014876865	-

Gene Model

Click here to download ENSPLAG00000011079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011079	ythdc1	85	65.625	ENSG00000083896	YTHDC1	57	59.545	Homo_sapiens
ENSPLAG00000011079	ythdc1	70	87.349	ENSAPOG00000013997	ythdc1	57	76.904	Acanthochromis_polyacanthus
ENSPLAG00000011079	ythdc1	85	64.989	ENSAMEG00000005688	YTHDC1	60	58.887	Ailuropoda_melanoleuca
ENSPLAG00000011079	ythdc1	87	76.829	ENSACIG00000019728	ythdc1	62	76.413	Amphilophus_citrinellus
ENSPLAG00000011079	ythdc1	86	89.706	ENSAOCG00000000239	ythdc1	60	88.971	Amphiprion_ocellaris
ENSPLAG00000011079	ythdc1	70	91.916	ENSAPEG00000000618	ythdc1	52	91.566	Amphiprion_percula
ENSPLAG00000011079	ythdc1	77	85.870	ENSATEG00000023007	ythdc1	54	89.697	Anabas_testudineus
ENSPLAG00000011079	ythdc1	85	65.517	ENSAPLG00000009921	YTHDC1	60	60.091	Anas_platyrhynchos
ENSPLAG00000011079	ythdc1	85	62.989	ENSACAG00000009697	YTHDC1	58	57.301	Anolis_carolinensis
ENSPLAG00000011079	ythdc1	85	65.144	ENSANAG00000001522	YTHDC1	57	59.545	Aotus_nancymaae
ENSPLAG00000011079	ythdc1	87	87.348	ENSACLG00000019371	ythdc1	60	87.010	Astatotilapia_calliptera
ENSPLAG00000011079	ythdc1	85	74.321	ENSAMXG00000006978	ythdc1	57	68.171	Astyanax_mexicanus
ENSPLAG00000011079	ythdc1	85	64.073	ENSBTAG00000015572	YTHDC1	57	59.318	Bos_taurus
ENSPLAG00000011079	ythdc1	85	65.625	ENSCJAG00000009934	YTHDC1	57	59.545	Callithrix_jacchus
ENSPLAG00000011079	ythdc1	85	64.989	ENSCAFG00000002821	YTHDC1	60	58.887	Canis_familiaris
ENSPLAG00000011079	ythdc1	85	64.989	ENSCAFG00020027112	YTHDC1	60	58.887	Canis_lupus_dingo
ENSPLAG00000011079	ythdc1	85	58.313	ENSCHIG00000004810	YTHDC1	50	65.693	Capra_hircus
ENSPLAG00000011079	ythdc1	85	65.625	ENSTSYG00000011668	YTHDC1	57	59.545	Carlito_syrichta
ENSPLAG00000011079	ythdc1	85	58.072	ENSCPOG00000010929	YTHDC1	54	53.226	Cavia_porcellus
ENSPLAG00000011079	ythdc1	85	65.625	ENSCCAG00000035754	YTHDC1	57	59.545	Cebus_capucinus
ENSPLAG00000011079	ythdc1	85	65.625	ENSCATG00000036320	YTHDC1	51	65.693	Cercocebus_atys
ENSPLAG00000011079	ythdc1	87	64.471	ENSCLAG00000005482	YTHDC1	58	58.259	Chinchilla_lanigera
ENSPLAG00000011079	ythdc1	85	65.217	ENSCSAG00000005252	YTHDC1	57	59.545	Chlorocebus_sabaeus
ENSPLAG00000011079	ythdc1	65	72.368	ENSCHOG00000006136	-	60	78.400	Choloepus_hoffmanni
ENSPLAG00000011079	ythdc1	85	69.533	ENSCPBG00000021965	YTHDC1	62	59.637	Chrysemys_picta_bellii
ENSPLAG00000011079	ythdc1	85	65.625	ENSCANG00000004769	YTHDC1	57	59.545	Colobus_angolensis_palliatus
ENSPLAG00000011079	ythdc1	85	64.904	ENSCGRG00001000816	Ythdc1	56	60.000	Cricetulus_griseus_chok1gshd
ENSPLAG00000011079	ythdc1	85	64.904	ENSCGRG00000009807	Ythdc1	57	59.318	Cricetulus_griseus_crigri
ENSPLAG00000011079	ythdc1	86	90.394	ENSCSEG00000020404	ythdc1	60	89.901	Cynoglossus_semilaevis
ENSPLAG00000011079	ythdc1	86	93.300	ENSCVAG00000022349	ythdc1	59	93.052	Cyprinodon_variegatus
ENSPLAG00000011079	ythdc1	85	72.346	ENSDARG00000051953	ythdc1	58	66.271	Danio_rerio
ENSPLAG00000011079	ythdc1	87	63.535	ENSDNOG00000004949	YTHDC1	57	59.545	Dasypus_novemcinctus
ENSPLAG00000011079	ythdc1	85	65.625	ENSDORG00000013045	Ythdc1	58	59.545	Dipodomys_ordii
ENSPLAG00000011079	ythdc1	85	64.989	ENSEASG00005018383	YTHDC1	65	58.887	Equus_asinus_asinus
ENSPLAG00000011079	ythdc1	89	65.721	ENSECAG00000018303	YTHDC1	65	58.887	Equus_caballus
ENSPLAG00000011079	ythdc1	85	64.531	ENSEEUG00000015466	YTHDC1	57	58.628	Erinaceus_europaeus
ENSPLAG00000011079	ythdc1	85	69.952	ENSELUG00000014029	ythdc1	51	72.674	Esox_lucius
ENSPLAG00000011079	ythdc1	85	65.385	ENSFCAG00000026791	YTHDC1	60	58.887	Felis_catus
ENSPLAG00000011079	ythdc1	91	63.908	ENSFALG00000006581	YTHDC1	69	65.591	Ficedula_albicollis
ENSPLAG00000011079	ythdc1	85	64.663	ENSFDAG00000018560	YTHDC1	58	59.318	Fukomys_damarensis
ENSPLAG00000011079	ythdc1	76	80.804	ENSGMOG00000018815	ythdc1	56	80.804	Gadus_morhua
ENSPLAG00000011079	ythdc1	85	65.625	ENSGALG00000035906	YTHDC1	54	61.283	Gallus_gallus
ENSPLAG00000011079	ythdc1	58	99.267	ENSGAFG00000001759	ythdc1	60	99.267	Gambusia_affinis
ENSPLAG00000011079	ythdc1	86	72.998	ENSGACG00000015486	ythdc1	57	71.396	Gasterosteus_aculeatus
ENSPLAG00000011079	ythdc1	85	69.287	ENSGAGG00000007108	YTHDC1	57	65.049	Gopherus_agassizii
ENSPLAG00000011079	ythdc1	85	65.625	ENSGGOG00000021958	YTHDC1	58	58.482	Gorilla_gorilla
ENSPLAG00000011079	ythdc1	87	87.348	ENSHBUG00000019288	ythdc1	60	87.010	Haplochromis_burtoni
ENSPLAG00000011079	ythdc1	87	50.685	ENSHGLG00000003239	-	56	45.688	Heterocephalus_glaber_female
ENSPLAG00000011079	ythdc1	85	65.144	ENSHGLG00000006319	-	58	58.259	Heterocephalus_glaber_female
ENSPLAG00000011079	ythdc1	85	63.810	ENSHGLG00100001556	-	58	57.143	Heterocephalus_glaber_male
ENSPLAG00000011079	ythdc1	87	48.753	ENSHGLG00100008060	-	57	43.519	Heterocephalus_glaber_male
ENSPLAG00000011079	ythdc1	82	79.487	ENSHCOG00000001520	ythdc1	65	77.586	Hippocampus_comes
ENSPLAG00000011079	ythdc1	85	71.358	ENSIPUG00000018136	ythdc1	58	66.508	Ictalurus_punctatus
ENSPLAG00000011079	ythdc1	85	64.387	ENSSTOG00000013652	YTHDC1	57	58.482	Ictidomys_tridecemlineatus
ENSPLAG00000011079	ythdc1	85	64.663	ENSJJAG00000010268	Ythdc1	57	59.397	Jaculus_jaculus
ENSPLAG00000011079	ythdc1	86	86.520	ENSKMAG00000006483	ythdc1	85	88.725	Kryptolebias_marmoratus
ENSPLAG00000011079	ythdc1	86	73.522	ENSLBEG00000020831	ythdc1	66	70.396	Labrus_bergylta
ENSPLAG00000011079	ythdc1	84	64.750	ENSLACG00000004893	YTHDC1	60	59.497	Latimeria_chalumnae
ENSPLAG00000011079	ythdc1	85	66.129	ENSLOCG00000003045	ythdc1	52	67.385	Lepisosteus_oculatus
ENSPLAG00000011079	ythdc1	85	63.596	ENSLAFG00000021592	YTHDC1	65	64.365	Loxodonta_africana
ENSPLAG00000011079	ythdc1	85	65.625	ENSMFAG00000031927	YTHDC1	58	58.482	Macaca_fascicularis
ENSPLAG00000011079	ythdc1	85	65.625	ENSMMUG00000002265	YTHDC1	57	59.545	Macaca_mulatta
ENSPLAG00000011079	ythdc1	85	65.625	ENSMNEG00000033751	YTHDC1	57	59.545	Macaca_nemestrina
ENSPLAG00000011079	ythdc1	85	65.625	ENSMLEG00000042147	YTHDC1	57	59.545	Mandrillus_leucophaeus
ENSPLAG00000011079	ythdc1	85	87.624	ENSMAMG00000013122	ythdc1	58	86.978	Mastacembelus_armatus
ENSPLAG00000011079	ythdc1	87	87.348	ENSMZEG00005023173	ythdc1	60	87.010	Maylandia_zebra
ENSPLAG00000011079	ythdc1	85	65.287	ENSMGAG00000010391	YTHDC1	59	59.864	Meleagris_gallopavo
ENSPLAG00000011079	ythdc1	85	65.385	ENSMAUG00000001286	Ythdc1	56	60.000	Mesocricetus_auratus
ENSPLAG00000011079	ythdc1	87	65.493	ENSMICG00000034640	YTHDC1	56	60.000	Microcebus_murinus
ENSPLAG00000011079	ythdc1	85	65.385	ENSMOCG00000020201	Ythdc1	58	58.259	Microtus_ochrogaster
ENSPLAG00000011079	ythdc1	59	82.274	ENSMMOG00000021200	ythdc1	59	69.340	Mola_mola
ENSPLAG00000011079	ythdc1	93	44.397	ENSMODG00000010076	-	50	49.731	Monodelphis_domestica
ENSPLAG00000011079	ythdc1	72	48.696	ENSMODG00000004117	-	93	48.521	Monodelphis_domestica
ENSPLAG00000011079	ythdc1	92	44.538	ENSMODG00000009173	-	74	49.462	Monodelphis_domestica
ENSPLAG00000011079	ythdc1	85	64.989	ENSMODG00000020754	-	59	60.000	Monodelphis_domestica
ENSPLAG00000011079	ythdc1	71	91.343	ENSMALG00000013412	ythdc1	55	90.881	Monopterus_albus
ENSPLAG00000011079	ythdc1	85	65.385	MGP_CAROLIEiJ_G0027347	Ythdc1	57	59.318	Mus_caroli
ENSPLAG00000011079	ythdc1	87	64.789	ENSMUSG00000035851	Ythdc1	57	59.318	Mus_musculus
ENSPLAG00000011079	ythdc1	87	64.789	MGP_PahariEiJ_G0017126	Ythdc1	57	59.318	Mus_pahari
ENSPLAG00000011079	ythdc1	87	64.789	MGP_SPRETEiJ_G0028339	Ythdc1	57	59.318	Mus_spretus
ENSPLAG00000011079	ythdc1	85	64.760	ENSMLUG00000016300	YTHDC1	58	59.773	Myotis_lucifugus
ENSPLAG00000011079	ythdc1	87	82.482	ENSNBRG00000007663	ythdc1	71	82.108	Neolamprologus_brichardi
ENSPLAG00000011079	ythdc1	85	62.921	ENSNLEG00000009202	YTHDC1	57	57.812	Nomascus_leucogenys
ENSPLAG00000011079	ythdc1	85	64.183	ENSODEG00000001715	YTHDC1	57	59.318	Octodon_degus
ENSPLAG00000011079	ythdc1	87	87.835	ENSONIG00000012651	ythdc1	60	87.500	Oreochromis_niloticus
ENSPLAG00000011079	ythdc1	86	87.438	ENSORLG00000030544	ythdc1	61	86.946	Oryzias_latipes
ENSPLAG00000011079	ythdc1	87	87.805	ENSORLG00020019316	ythdc1	65	83.834	Oryzias_latipes_hni
ENSPLAG00000011079	ythdc1	86	82.039	ENSOMEG00000000551	ythdc1	61	81.553	Oryzias_melastigma
ENSPLAG00000011079	ythdc1	85	65.217	ENSOGAG00000003362	YTHDC1	57	60.000	Otolemur_garnettii
ENSPLAG00000011079	ythdc1	85	64.073	ENSOARG00000008633	YTHDC1	57	59.318	Ovis_aries
ENSPLAG00000011079	ythdc1	85	65.625	ENSPPAG00000041315	YTHDC1	51	65.693	Pan_paniscus
ENSPLAG00000011079	ythdc1	85	65.385	ENSPPRG00000011979	YTHDC1	61	57.895	Panthera_pardus
ENSPLAG00000011079	ythdc1	85	64.904	ENSPTIG00000015527	YTHDC1	62	57.474	Panthera_tigris_altaica
ENSPLAG00000011079	ythdc1	85	65.625	ENSPTRG00000016105	YTHDC1	51	65.693	Pan_troglodytes
ENSPLAG00000011079	ythdc1	85	65.625	ENSPANG00000021590	YTHDC1	56	60.238	Papio_anubis
ENSPLAG00000011079	ythdc1	86	68.109	ENSPKIG00000018497	ythdc1	60	61.239	Paramormyrops_kingsleyae
ENSPLAG00000011079	ythdc1	85	64.760	ENSPSIG00000002782	YTHDC1	60	59.864	Pelodiscus_sinensis
ENSPLAG00000011079	ythdc1	70	70.393	ENSPMGG00000000970	-	63	71.739	Periophthalmus_magnuspinnatus
ENSPLAG00000011079	ythdc1	85	65.385	ENSPEMG00000013850	Ythdc1	58	59.318	Peromyscus_maniculatus_bairdii
ENSPLAG00000011079	ythdc1	85	65.385	ENSPCIG00000006870	YTHDC1	59	60.000	Phascolarctos_cinereus
ENSPLAG00000011079	ythdc1	99	100.000	ENSPFOG00000013404	ythdc1	71	100.000	Poecilia_formosa
ENSPLAG00000011079	ythdc1	99	100.000	ENSPMEG00000009238	ythdc1	71	100.000	Poecilia_mexicana
ENSPLAG00000011079	ythdc1	99	85.106	ENSPREG00000016973	ythdc1	68	85.106	Poecilia_reticulata
ENSPLAG00000011079	ythdc1	85	64.760	ENSPPYG00000014726	YTHDC1	65	59.545	Pongo_abelii
ENSPLAG00000011079	ythdc1	87	60.911	ENSPCOG00000019105	YTHDC1	54	56.311	Propithecus_coquereli
ENSPLAG00000011079	ythdc1	85	61.785	ENSPVAG00000015551	YTHDC1	60	55.556	Pteropus_vampyrus
ENSPLAG00000011079	ythdc1	87	87.348	ENSPNYG00000011687	ythdc1	60	87.010	Pundamilia_nyererei
ENSPLAG00000011079	ythdc1	85	74.321	ENSPNAG00000028365	ythdc1	57	67.696	Pygocentrus_nattereri
ENSPLAG00000011079	ythdc1	85	63.820	ENSRNOG00000001996	Ythdc1	57	58.259	Rattus_norvegicus
ENSPLAG00000011079	ythdc1	85	63.883	ENSRBIG00000028279	YTHDC1	58	58.744	Rhinopithecus_bieti
ENSPLAG00000011079	ythdc1	85	65.625	ENSRROG00000035028	YTHDC1	57	59.545	Rhinopithecus_roxellana
ENSPLAG00000011079	ythdc1	85	65.625	ENSSBOG00000022353	YTHDC1	58	58.482	Saimiri_boliviensis_boliviensis
ENSPLAG00000011079	ythdc1	85	64.531	ENSSHAG00000002538	YTHDC1	65	60.000	Sarcophilus_harrisii
ENSPLAG00000011079	ythdc1	85	73.219	ENSSFOG00015003298	ythdc1	58	67.299	Scleropages_formosus
ENSPLAG00000011079	ythdc1	85	90.050	ENSSMAG00000009086	ythdc1	60	89.383	Scophthalmus_maximus
ENSPLAG00000011079	ythdc1	85	89.826	ENSSDUG00000022008	ythdc1	59	89.163	Seriola_dumerili
ENSPLAG00000011079	ythdc1	85	89.826	ENSSLDG00000007926	ythdc1	59	89.163	Seriola_lalandi_dorsalis
ENSPLAG00000011079	ythdc1	85	63.844	ENSSARG00000010960	YTHDC1	76	58.244	Sorex_araneus
ENSPLAG00000011079	ythdc1	85	65.602	ENSSPUG00000009357	YTHDC1	61	59.292	Sphenodon_punctatus
ENSPLAG00000011079	ythdc1	86	89.655	ENSSPAG00000011449	ythdc1	59	89.409	Stegastes_partitus
ENSPLAG00000011079	ythdc1	85	64.989	ENSSSCG00000035505	YTHDC1	65	57.895	Sus_scrofa
ENSPLAG00000011079	ythdc1	85	65.446	ENSTGUG00000004452	-	59	60.091	Taeniopygia_guttata
ENSPLAG00000011079	ythdc1	89	77.962	ENSTRUG00000010142	ythdc1	63	77.641	Takifugu_rubripes
ENSPLAG00000011079	ythdc1	90	82.436	ENSTNIG00000013243	ythdc1	62	83.990	Tetraodon_nigroviridis
ENSPLAG00000011079	ythdc1	85	63.844	ENSTTRG00000005083	YTHDC1	60	57.816	Tursiops_truncatus
ENSPLAG00000011079	ythdc1	85	65.385	ENSUAMG00000010388	YTHDC1	65	58.887	Ursus_americanus
ENSPLAG00000011079	ythdc1	87	56.726	ENSUMAG00000013668	YTHDC1	61	51.794	Ursus_maritimus
ENSPLAG00000011079	ythdc1	87	64.000	ENSVPAG00000009040	YTHDC1	56	60.000	Vicugna_pacos
ENSPLAG00000011079	ythdc1	85	64.531	ENSVVUG00000005387	YTHDC1	65	58.887	Vulpes_vulpes
ENSPLAG00000011079	ythdc1	85	69.212	ENSXETG00000017960	ythdc1	57	64.692	Xenopus_tropicalis
ENSPLAG00000011079	ythdc1	53	76.562	ENSXCOG00000000530	ythdc1	60	74.609	Xiphophorus_couchianus
ENSPLAG00000011079	ythdc1	100	99.151	ENSXMAG00000005196	ythdc1	71	99.151	Xiphophorus_maculatus