EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000011105 (Gene tree)
Gene ID: 106960567
Gene Symbol: larp6a
Alias: -
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 7546 bases
Position: chrKQ546512.1:112493-120038
Accession: 106960567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000008530	La	PF05383.17	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000002731	-	3970	XM_015053711	ENSPLAP00000008530	692 (aa)	XP_014909197	UPI00072EA31B

Gene Model

Click here to download ENSPLAG00000011105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011105's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000011105	larp6a	57	31.658	ENSPLAG00000005133	-	92	31.658

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011105	larp6a	62	59.641	ENSG00000166173	LARP6	87	59.641	Homo_sapiens
ENSPLAG00000011105	larp6a	100	85.837	ENSAPOG00000021773	larp6a	100	85.122	Acanthochromis_polyacanthus
ENSPLAG00000011105	larp6a	60	60.739	ENSAMEG00000008897	LARP6	97	60.739	Ailuropoda_melanoleuca
ENSPLAG00000011105	larp6a	73	92.063	ENSACIG00000005166	larp6a	100	92.063	Amphilophus_citrinellus
ENSPLAG00000011105	larp6a	100	85.509	ENSAOCG00000002284	larp6a	100	85.222	Amphiprion_ocellaris
ENSPLAG00000011105	larp6a	74	91.228	ENSAPEG00000008077	larp6a	100	91.228	Amphiprion_percula
ENSPLAG00000011105	larp6a	100	84.263	ENSATEG00000004018	larp6a	100	84.406	Anabas_testudineus
ENSPLAG00000011105	larp6a	60	60.280	ENSAPLG00000009914	LARP6	98	60.280	Anas_platyrhynchos
ENSPLAG00000011105	larp6a	61	60.520	ENSACAG00000008613	LARP6	99	60.093	Anolis_carolinensis
ENSPLAG00000011105	larp6a	62	59.865	ENSANAG00000024860	LARP6	87	59.865	Aotus_nancymaae
ENSPLAG00000011105	larp6a	100	83.908	ENSACLG00000018561	larp6a	97	84.052	Astatotilapia_calliptera
ENSPLAG00000011105	larp6a	77	78.947	ENSAMXG00000029387	larp6a	98	77.515	Astyanax_mexicanus
ENSPLAG00000011105	larp6a	60	40.046	ENSAMXG00000036816	-	94	41.435	Astyanax_mexicanus
ENSPLAG00000011105	larp6a	62	59.641	ENSBTAG00000003915	LARP6	87	59.641	Bos_taurus
ENSPLAG00000011105	larp6a	62	59.551	ENSCJAG00000018642	-	87	59.551	Callithrix_jacchus
ENSPLAG00000011105	larp6a	66	56.701	ENSCJAG00000046236	-	87	59.101	Callithrix_jacchus
ENSPLAG00000011105	larp6a	60	60.508	ENSCAFG00000017616	LARP6	97	60.325	Canis_familiaris
ENSPLAG00000011105	larp6a	66	58.025	ENSCAFG00020007296	LARP6	88	59.821	Canis_lupus_dingo
ENSPLAG00000011105	larp6a	62	59.641	ENSCHIG00000013742	LARP6	87	59.641	Capra_hircus
ENSPLAG00000011105	larp6a	61	59.226	ENSTSYG00000028124	LARP6	86	59.226	Carlito_syrichta
ENSPLAG00000011105	larp6a	60	59.251	ENSCAPG00000015452	LARP6	97	59.251	Cavia_aperea
ENSPLAG00000011105	larp6a	67	56.415	ENSCPOG00000022687	LARP6	87	58.652	Cavia_porcellus
ENSPLAG00000011105	larp6a	62	59.865	ENSCCAG00000036320	LARP6	87	59.865	Cebus_capucinus
ENSPLAG00000011105	larp6a	62	59.641	ENSCATG00000042432	LARP6	87	59.641	Cercocebus_atys
ENSPLAG00000011105	larp6a	64	59.031	ENSCLAG00000007893	LARP6	97	56.768	Chinchilla_lanigera
ENSPLAG00000011105	larp6a	62	59.641	ENSCSAG00000013672	LARP6	87	59.641	Chlorocebus_sabaeus
ENSPLAG00000011105	larp6a	62	59.417	ENSCHOG00000003318	LARP6	90	59.417	Choloepus_hoffmanni
ENSPLAG00000011105	larp6a	67	60.722	ENSCPBG00000010771	LARP6	88	60.722	Chrysemys_picta_bellii
ENSPLAG00000011105	larp6a	60	60.093	ENSCANG00000025833	LARP6	98	60.093	Colobus_angolensis_palliatus
ENSPLAG00000011105	larp6a	62	60.045	ENSCGRG00001024472	Larp6	87	60.045	Cricetulus_griseus_chok1gshd
ENSPLAG00000011105	larp6a	62	60.045	ENSCGRG00000004527	Larp6	87	60.045	Cricetulus_griseus_crigri
ENSPLAG00000011105	larp6a	91	83.043	ENSCSEG00000011196	larp6a	96	81.762	Cynoglossus_semilaevis
ENSPLAG00000011105	larp6a	100	88.921	ENSCVAG00000009605	larp6a	100	88.921	Cyprinodon_variegatus
ENSPLAG00000011105	larp6a	68	82.390	ENSDARG00000005355	larp6a	99	84.296	Danio_rerio
ENSPLAG00000011105	larp6a	62	58.916	ENSDNOG00000042993	LARP6	87	58.916	Dasypus_novemcinctus
ENSPLAG00000011105	larp6a	66	55.165	ENSDORG00000023910	Larp6	88	58.667	Dipodomys_ordii
ENSPLAG00000011105	larp6a	62	60.538	ENSEASG00005005490	LARP6	64	60.538	Equus_asinus_asinus
ENSPLAG00000011105	larp6a	62	60.762	ENSECAG00000014190	LARP6	96	59.821	Equus_caballus
ENSPLAG00000011105	larp6a	100	72.869	ENSELUG00000007341	larp6a	100	72.159	Esox_lucius
ENSPLAG00000011105	larp6a	62	59.193	ENSFCAG00000001361	LARP6	87	59.193	Felis_catus
ENSPLAG00000011105	larp6a	66	59.494	ENSFALG00000012389	LARP6	97	59.494	Ficedula_albicollis
ENSPLAG00000011105	larp6a	62	59.545	ENSFDAG00000019994	LARP6	83	59.545	Fukomys_damarensis
ENSPLAG00000011105	larp6a	100	91.908	ENSFHEG00000010312	larp6a	100	91.618	Fundulus_heteroclitus
ENSPLAG00000011105	larp6a	62	60.948	ENSGALG00000004046	LARP6	87	60.948	Gallus_gallus
ENSPLAG00000011105	larp6a	100	94.653	ENSGAFG00000009426	larp6a	100	94.509	Gambusia_affinis
ENSPLAG00000011105	larp6a	62	89.535	ENSGACG00000014622	larp6a	99	89.535	Gasterosteus_aculeatus
ENSPLAG00000011105	larp6a	62	59.039	ENSGAGG00000010802	LARP6	63	59.039	Gopherus_agassizii
ENSPLAG00000011105	larp6a	60	60.093	ENSGGOG00000024151	LARP6	98	60.093	Gorilla_gorilla
ENSPLAG00000011105	larp6a	100	83.908	ENSHBUG00000021014	larp6a	97	84.052	Haplochromis_burtoni
ENSPLAG00000011105	larp6a	62	60.762	ENSHGLG00000015112	LARP6	95	58.522	Heterocephalus_glaber_female
ENSPLAG00000011105	larp6a	60	61.021	ENSHGLG00100013159	LARP6	98	61.021	Heterocephalus_glaber_male
ENSPLAG00000011105	larp6a	71	86.061	ENSHCOG00000001241	larp6a	100	83.430	Hippocampus_comes
ENSPLAG00000011105	larp6a	62	35.648	ENSIPUG00000002828	-	97	39.211	Ictalurus_punctatus
ENSPLAG00000011105	larp6a	100	63.394	ENSIPUG00000010187	larp6	100	64.516	Ictalurus_punctatus
ENSPLAG00000011105	larp6a	62	59.417	ENSSTOG00000024279	LARP6	93	59.417	Ictidomys_tridecemlineatus
ENSPLAG00000011105	larp6a	62	58.744	ENSJJAG00000011013	Larp6	96	56.762	Jaculus_jaculus
ENSPLAG00000011105	larp6a	100	79.184	ENSKMAG00000001702	larp6a	100	80.408	Kryptolebias_marmoratus
ENSPLAG00000011105	larp6a	74	87.135	ENSLBEG00000000170	larp6a	100	87.135	Labrus_bergylta
ENSPLAG00000011105	larp6a	59	44.893	ENSLACG00000002786	-	95	45.498	Latimeria_chalumnae
ENSPLAG00000011105	larp6a	68	63.580	ENSLACG00000018706	LARP6	91	64.256	Latimeria_chalumnae
ENSPLAG00000011105	larp6a	59	43.632	ENSLOCG00000008547	-	80	45.626	Lepisosteus_oculatus
ENSPLAG00000011105	larp6a	100	64.892	ENSLOCG00000014592	larp6a	100	64.275	Lepisosteus_oculatus
ENSPLAG00000011105	larp6a	62	60.314	ENSLAFG00000016343	LARP6	96	60.314	Loxodonta_africana
ENSPLAG00000011105	larp6a	62	59.641	ENSMFAG00000035507	LARP6	96	59.641	Macaca_fascicularis
ENSPLAG00000011105	larp6a	62	59.641	ENSMMUG00000004429	LARP6	90	59.641	Macaca_mulatta
ENSPLAG00000011105	larp6a	62	59.641	ENSMNEG00000045335	LARP6	87	59.641	Macaca_nemestrina
ENSPLAG00000011105	larp6a	60	60.093	ENSMLEG00000038587	LARP6	98	60.093	Mandrillus_leucophaeus
ENSPLAG00000011105	larp6a	100	83.357	ENSMAMG00000005261	larp6a	100	83.644	Mastacembelus_armatus
ENSPLAG00000011105	larp6a	100	84.052	ENSMZEG00005005774	larp6a	97	84.195	Maylandia_zebra
ENSPLAG00000011105	larp6a	60	62.441	ENSMGAG00000005077	LARP6	98	62.295	Meleagris_gallopavo
ENSPLAG00000011105	larp6a	62	58.969	ENSMAUG00000018486	Larp6	87	59.641	Mesocricetus_auratus
ENSPLAG00000011105	larp6a	62	58.969	ENSMICG00000011234	LARP6	95	57.025	Microcebus_murinus
ENSPLAG00000011105	larp6a	62	59.865	ENSMOCG00000010492	Larp6	87	59.865	Microtus_ochrogaster
ENSPLAG00000011105	larp6a	74	87.135	ENSMMOG00000016284	larp6a	100	87.135	Mola_mola
ENSPLAG00000011105	larp6a	62	56.629	ENSMODG00000009034	LARP6	98	52.941	Monodelphis_domestica
ENSPLAG00000011105	larp6a	73	88.294	ENSMALG00000014439	larp6a	98	88.294	Monopterus_albus
ENSPLAG00000011105	larp6a	62	59.641	MGP_CAROLIEiJ_G0032314	Larp6	87	59.641	Mus_caroli
ENSPLAG00000011105	larp6a	64	59.031	ENSMUSG00000034839	Larp6	87	59.417	Mus_musculus
ENSPLAG00000011105	larp6a	64	59.031	MGP_PahariEiJ_G0015180	Larp6	87	59.417	Mus_pahari
ENSPLAG00000011105	larp6a	64	59.251	MGP_SPRETEiJ_G0033452	Larp6	87	59.641	Mus_spretus
ENSPLAG00000011105	larp6a	60	60.138	ENSMPUG00000017086	LARP6	97	59.954	Mustela_putorius_furo
ENSPLAG00000011105	larp6a	62	59.775	ENSMLUG00000010319	LARP6	87	59.775	Myotis_lucifugus
ENSPLAG00000011105	larp6a	62	59.641	ENSNGAG00000014238	Larp6	87	59.641	Nannospalax_galili
ENSPLAG00000011105	larp6a	74	91.423	ENSNBRG00000008120	larp6a	100	91.423	Neolamprologus_brichardi
ENSPLAG00000011105	larp6a	62	59.641	ENSNLEG00000013691	LARP6	88	59.641	Nomascus_leucogenys
ENSPLAG00000011105	larp6a	52	65.385	ENSMEUG00000002270	LARP6	75	67.213	Notamacropus_eugenii
ENSPLAG00000011105	larp6a	51	55.191	ENSOPRG00000004868	-	99	55.890	Ochotona_princeps
ENSPLAG00000011105	larp6a	66	57.588	ENSODEG00000015958	LARP6	95	57.411	Octodon_degus
ENSPLAG00000011105	larp6a	74	90.485	ENSONIG00000002901	larp6a	100	90.485	Oreochromis_niloticus
ENSPLAG00000011105	larp6a	58	60.244	ENSOCUG00000009306	LARP6	97	59.574	Oryctolagus_cuniculus
ENSPLAG00000011105	larp6a	72	90.323	ENSORLG00000014256	larp6a	99	90.323	Oryzias_latipes
ENSPLAG00000011105	larp6a	100	82.878	ENSORLG00020019657	larp6a	100	82.590	Oryzias_latipes_hni
ENSPLAG00000011105	larp6a	100	83.597	ENSORLG00015017915	larp6a	100	83.309	Oryzias_latipes_hsok
ENSPLAG00000011105	larp6a	100	84.438	ENSOMEG00000017049	larp6a	100	84.150	Oryzias_melastigma
ENSPLAG00000011105	larp6a	62	58.597	ENSOGAG00000000522	LARP6	87	59.459	Otolemur_garnettii
ENSPLAG00000011105	larp6a	60	59.954	ENSOARG00000018750	LARP6	97	59.954	Ovis_aries
ENSPLAG00000011105	larp6a	60	60.093	ENSPPAG00000031247	LARP6	98	60.093	Pan_paniscus
ENSPLAG00000011105	larp6a	62	58.969	ENSPPRG00000011282	LARP6	87	58.969	Panthera_pardus
ENSPLAG00000011105	larp6a	60	59.629	ENSPTIG00000015318	LARP6	85	59.629	Panthera_tigris_altaica
ENSPLAG00000011105	larp6a	62	59.641	ENSPTRG00000007234	LARP6	87	59.641	Pan_troglodytes
ENSPLAG00000011105	larp6a	62	59.641	ENSPANG00000016362	LARP6	87	59.641	Papio_anubis
ENSPLAG00000011105	larp6a	100	62.748	ENSPKIG00000004511	LARP6	100	62.553	Paramormyrops_kingsleyae
ENSPLAG00000011105	larp6a	100	61.636	ENSPKIG00000020103	larp6a	89	75.053	Paramormyrops_kingsleyae
ENSPLAG00000011105	larp6a	71	91.002	ENSPMGG00000006958	larp6a	98	91.002	Periophthalmus_magnuspinnatus
ENSPLAG00000011105	larp6a	66	57.172	ENSPEMG00000012909	Larp6	87	59.375	Peromyscus_maniculatus_bairdii
ENSPLAG00000011105	larp6a	62	57.366	ENSPCIG00000020765	LARP6	83	57.366	Phascolarctos_cinereus
ENSPLAG00000011105	larp6a	74	99.612	ENSPFOG00000014175	larp6a	100	99.612	Poecilia_formosa
ENSPLAG00000011105	larp6a	100	98.988	ENSPMEG00000011085	larp6a	100	98.988	Poecilia_mexicana
ENSPLAG00000011105	larp6a	100	97.547	ENSPREG00000008067	larp6a	100	97.547	Poecilia_reticulata
ENSPLAG00000011105	larp6a	62	59.641	ENSPPYG00000006604	LARP6	87	59.641	Pongo_abelii
ENSPLAG00000011105	larp6a	62	58.969	ENSPCOG00000022934	LARP6	87	58.969	Propithecus_coquereli
ENSPLAG00000011105	larp6a	62	60.762	ENSPVAG00000005618	LARP6	95	58.557	Pteropus_vampyrus
ENSPLAG00000011105	larp6a	74	91.033	ENSPNYG00000009835	larp6a	100	91.033	Pundamilia_nyererei
ENSPLAG00000011105	larp6a	72	77.087	ENSPNAG00000017966	larp6a	87	74.674	Pygocentrus_nattereri
ENSPLAG00000011105	larp6a	62	60.045	ENSRNOG00000012438	Larp6	87	59.865	Rattus_norvegicus
ENSPLAG00000011105	larp6a	65	58.263	ENSRBIG00000032902	LARP6	88	59.284	Rhinopithecus_bieti
ENSPLAG00000011105	larp6a	62	59.641	ENSRROG00000043074	LARP6	87	59.641	Rhinopithecus_roxellana
ENSPLAG00000011105	larp6a	60	60.325	ENSSBOG00000024190	LARP6	98	60.325	Saimiri_boliviensis_boliviensis
ENSPLAG00000011105	larp6a	61	54.462	ENSSHAG00000018495	LARP6	99	56.064	Sarcophilus_harrisii
ENSPLAG00000011105	larp6a	68	72.956	ENSSFOG00015002254	LARP6	98	70.079	Scleropages_formosus
ENSPLAG00000011105	larp6a	62	77.367	ENSSFOG00015023268	larp6a	95	73.101	Scleropages_formosus
ENSPLAG00000011105	larp6a	100	80.878	ENSSMAG00000009953	larp6a	100	81.020	Scophthalmus_maximus
ENSPLAG00000011105	larp6a	100	83.191	ENSSDUG00000007438	larp6a	100	83.048	Seriola_dumerili
ENSPLAG00000011105	larp6a	100	83.286	ENSSLDG00000016647	larp6a	100	83.143	Seriola_lalandi_dorsalis
ENSPLAG00000011105	larp6a	60	61.882	ENSSPUG00000011312	LARP6	98	61.882	Sphenodon_punctatus
ENSPLAG00000011105	larp6a	100	85.714	ENSSPAG00000020502	larp6a	100	85.000	Stegastes_partitus
ENSPLAG00000011105	larp6a	62	59.865	ENSSSCG00000004974	LARP6	87	59.865	Sus_scrofa
ENSPLAG00000011105	larp6a	60	60.748	ENSTGUG00000005808	LARP6	98	60.748	Taeniopygia_guttata
ENSPLAG00000011105	larp6a	100	75.466	ENSTRUG00000003151	larp6a	100	75.323	Takifugu_rubripes
ENSPLAG00000011105	larp6a	70	83.539	ENSTNIG00000011926	larp6a	100	83.539	Tetraodon_nigroviridis
ENSPLAG00000011105	larp6a	60	59.491	ENSTBEG00000015077	LARP6	98	59.491	Tupaia_belangeri
ENSPLAG00000011105	larp6a	61	60.091	ENSUAMG00000010467	LARP6	84	60.508	Ursus_americanus
ENSPLAG00000011105	larp6a	61	59.864	ENSVVUG00000015227	LARP6	93	60.093	Vulpes_vulpes
ENSPLAG00000011105	larp6a	66	62.900	ENSXETG00000020340	larp6	93	62.658	Xenopus_tropicalis
ENSPLAG00000011105	larp6a	69	98.109	ENSXCOG00000012654	larp6a	98	98.109	Xiphophorus_couchianus
ENSPLAG00000011105	larp6a	100	95.954	ENSXMAG00000021015	larp6a	96	95.954	Xiphophorus_maculatus