EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000011118 (Gene tree)
Gene ID: 106947112
Gene Symbol: chd9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 89126 bases
Position: chrKQ545538.1:44151-133276
Accession: 106947112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000024634	ResIII	PF04851.15	2.8e-06	1	1
ENSPLAP00000008441	ResIII	PF04851.15	1.3e-05	1	1
ENSPLAP00000024634	BRK	PF07533.16	9.5e-33	1	2
ENSPLAP00000024634	BRK	PF07533.16	9.5e-33	2	2
ENSPLAP00000008441	BRK	PF07533.16	1.4e-32	1	2
ENSPLAP00000008441	BRK	PF07533.16	1.4e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000002925	-	7461	XM_015031920	ENSPLAP00000024634	2486 (aa)	XP_014887406	-
ENSPLAT00000002884	-	12024	XM_015031914	ENSPLAP00000008441	2989 (aa)	XP_014887400	UPI00072DA8C1

Gene Model

Click here to download ENSPLAG00000011118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000011118	chd9	69	66.557	ENSPLAG00000003128	chd6	57	63.910
ENSPLAG00000011118	chd9	69	61.205	ENSPLAG00000018522	chd8	70	61.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011118	chd9	96	69.457	ENSG00000177200	CHD9	97	69.415	Homo_sapiens
ENSPLAG00000011118	chd9	99	90.587	ENSAPOG00000023034	chd9	99	89.903	Acanthochromis_polyacanthus
ENSPLAG00000011118	chd9	98	68.924	ENSAMEG00000016232	CHD9	84	70.767	Ailuropoda_melanoleuca
ENSPLAG00000011118	chd9	97	85.378	ENSACIG00000004097	chd9	98	78.552	Amphilophus_citrinellus
ENSPLAG00000011118	chd9	99	90.865	ENSAOCG00000005487	chd9	99	90.141	Amphiprion_ocellaris
ENSPLAG00000011118	chd9	99	90.825	ENSAPEG00000009859	chd9	99	90.141	Amphiprion_percula
ENSPLAG00000011118	chd9	99	88.947	ENSATEG00000002748	chd9	99	83.045	Anabas_testudineus
ENSPLAG00000011118	chd9	98	69.702	ENSAPLG00000002826	CHD9	56	77.771	Anas_platyrhynchos
ENSPLAG00000011118	chd9	68	75.059	ENSACAG00000016150	CHD9	83	70.904	Anolis_carolinensis
ENSPLAG00000011118	chd9	97	60.739	ENSANAG00000015630	CHD9	93	68.905	Aotus_nancymaae
ENSPLAG00000011118	chd9	98	87.094	ENSACLG00000016899	chd9	99	83.753	Astatotilapia_calliptera
ENSPLAG00000011118	chd9	99	76.410	ENSAMXG00000005652	chd9	97	78.519	Astyanax_mexicanus
ENSPLAG00000011118	chd9	98	68.347	ENSBTAG00000002287	CHD9	84	70.558	Bos_taurus
ENSPLAG00000011118	chd9	98	68.312	ENSCJAG00000001573	CHD9	93	69.258	Callithrix_jacchus
ENSPLAG00000011118	chd9	66	75.075	ENSCAFG00000009699	CHD9	84	70.965	Canis_familiaris
ENSPLAG00000011118	chd9	66	75.075	ENSCAFG00020002879	CHD9	91	69.965	Canis_lupus_dingo
ENSPLAG00000011118	chd9	98	68.374	ENSTSYG00000007693	CHD9	91	69.611	Carlito_syrichta
ENSPLAG00000011118	chd9	89	54.514	ENSCAPG00000011604	CHD9	78	60.765	Cavia_aperea
ENSPLAG00000011118	chd9	95	70.233	ENSCPOG00000036544	CHD9	83	66.667	Cavia_porcellus
ENSPLAG00000011118	chd9	97	61.113	ENSCCAG00000036178	CHD9	93	69.858	Cebus_capucinus
ENSPLAG00000011118	chd9	66	75.015	ENSCATG00000036753	CHD9	91	69.338	Cercocebus_atys
ENSPLAG00000011118	chd9	98	68.427	ENSCLAG00000007137	CHD9	99	77.146	Chinchilla_lanigera
ENSPLAG00000011118	chd9	66	74.955	ENSCSAG00000005311	CHD9	84	70.177	Chlorocebus_sabaeus
ENSPLAG00000011118	chd9	67	91.406	ENSCHOG00000003935	CHD9	55	91.361	Choloepus_hoffmanni
ENSPLAG00000011118	chd9	90	82.027	ENSCPBG00000012459	CHD9	86	76.980	Chrysemys_picta_bellii
ENSPLAG00000011118	chd9	92	66.002	ENSCANG00000030349	CHD9	91	69.965	Colobus_angolensis_palliatus
ENSPLAG00000011118	chd9	98	68.616	ENSCGRG00001016150	Chd9	79	70.863	Cricetulus_griseus_chok1gshd
ENSPLAG00000011118	chd9	98	68.616	ENSCGRG00000012850	Chd9	100	77.158	Cricetulus_griseus_crigri
ENSPLAG00000011118	chd9	99	85.572	ENSCSEG00000009209	chd9	99	84.029	Cynoglossus_semilaevis
ENSPLAG00000011118	chd9	97	92.739	ENSCVAG00000016195	chd9	99	88.354	Cyprinodon_variegatus
ENSPLAG00000011118	chd9	99	76.308	ENSDARG00000074498	chd9	97	77.284	Danio_rerio
ENSPLAG00000011118	chd9	95	69.488	ENSDNOG00000006045	CHD9	96	71.348	Dasypus_novemcinctus
ENSPLAG00000011118	chd9	81	69.550	ENSDORG00000008523	-	96	70.998	Dipodomys_ordii
ENSPLAG00000011118	chd9	85	92.063	ENSETEG00000009565	CHD9	71	92.063	Echinops_telfairi
ENSPLAG00000011118	chd9	98	67.176	ENSEASG00005014832	CHD9	96	78.495	Equus_asinus_asinus
ENSPLAG00000011118	chd9	93	68.067	ENSECAG00000011505	CHD9	84	70.280	Equus_caballus
ENSPLAG00000011118	chd9	80	86.522	ENSEEUG00000014515	CHD9	72	84.530	Erinaceus_europaeus
ENSPLAG00000011118	chd9	99	76.754	ENSELUG00000006031	chd9	97	78.215	Esox_lucius
ENSPLAG00000011118	chd9	98	68.737	ENSFCAG00000022534	CHD9	91	70.318	Felis_catus
ENSPLAG00000011118	chd9	99	69.264	ENSFALG00000013276	CHD9	97	70.704	Ficedula_albicollis
ENSPLAG00000011118	chd9	99	59.726	ENSFDAG00000021037	CHD9	85	69.862	Fukomys_damarensis
ENSPLAG00000011118	chd9	99	93.443	ENSFHEG00000006068	chd9	99	94.108	Fundulus_heteroclitus
ENSPLAG00000011118	chd9	79	86.957	ENSGMOG00000006040	chd9	84	86.608	Gadus_morhua
ENSPLAG00000011118	chd9	93	71.981	ENSGALG00000039178	CHD9	80	72.834	Gallus_gallus
ENSPLAG00000011118	chd9	100	98.295	ENSGAFG00000010014	chd9	100	98.295	Gambusia_affinis
ENSPLAG00000011118	chd9	97	60.572	ENSGGOG00000014816	CHD9	93	69.611	Gorilla_gorilla
ENSPLAG00000011118	chd9	99	87.163	ENSHBUG00000023322	chd9	99	87.565	Haplochromis_burtoni
ENSPLAG00000011118	chd9	97	69.052	ENSHGLG00000014938	CHD9	96	80.262	Heterocephalus_glaber_female
ENSPLAG00000011118	chd9	96	82.723	ENSHCOG00000000937	chd9	97	82.375	Hippocampus_comes
ENSPLAG00000011118	chd9	99	77.539	ENSIPUG00000016448	chd9	96	78.616	Ictalurus_punctatus
ENSPLAG00000011118	chd9	97	68.860	ENSSTOG00000022273	CHD9	99	76.966	Ictidomys_tridecemlineatus
ENSPLAG00000011118	chd9	79	71.134	ENSJJAG00000015741	-	96	70.926	Jaculus_jaculus
ENSPLAG00000011118	chd9	96	90.935	ENSKMAG00000016784	chd9	96	91.029	Kryptolebias_marmoratus
ENSPLAG00000011118	chd9	99	87.931	ENSLBEG00000012077	chd9	96	89.095	Labrus_bergylta
ENSPLAG00000011118	chd9	98	65.452	ENSLACG00000005557	CHD9	79	67.170	Latimeria_chalumnae
ENSPLAG00000011118	chd9	98	75.622	ENSLOCG00000007225	chd9	98	76.041	Lepisosteus_oculatus
ENSPLAG00000011118	chd9	66	74.851	ENSLAFG00000015374	CHD9	84	69.745	Loxodonta_africana
ENSPLAG00000011118	chd9	94	70.034	ENSMFAG00000041354	CHD9	94	71.051	Macaca_fascicularis
ENSPLAG00000011118	chd9	99	59.687	ENSMMUG00000016310	CHD9	91	69.965	Macaca_mulatta
ENSPLAG00000011118	chd9	99	59.765	ENSMNEG00000031494	CHD9	85	71.834	Macaca_nemestrina
ENSPLAG00000011118	chd9	99	59.654	ENSMLEG00000043219	CHD9	91	69.965	Mandrillus_leucophaeus
ENSPLAG00000011118	chd9	99	88.745	ENSMAMG00000003909	chd9	99	82.700	Mastacembelus_armatus
ENSPLAG00000011118	chd9	99	88.960	ENSMZEG00005006581	chd9	99	88.519	Maylandia_zebra
ENSPLAG00000011118	chd9	98	64.874	ENSMGAG00000004642	CHD9	59	72.993	Meleagris_gallopavo
ENSPLAG00000011118	chd9	98	68.856	ENSMICG00000016679	CHD9	91	70.318	Microcebus_murinus
ENSPLAG00000011118	chd9	97	85.101	ENSMMOG00000016406	chd9	97	78.255	Mola_mola
ENSPLAG00000011118	chd9	86	75.722	ENSMODG00000013142	-	96	77.399	Monodelphis_domestica
ENSPLAG00000011118	chd9	97	86.436	ENSMALG00000013306	chd9	99	78.730	Monopterus_albus
ENSPLAG00000011118	chd9	95	69.366	MGP_CAROLIEiJ_G0031364	Chd9	79	69.979	Mus_caroli
ENSPLAG00000011118	chd9	95	69.715	ENSMUSG00000056608	Chd9	100	75.847	Mus_musculus
ENSPLAG00000011118	chd9	98	66.882	MGP_PahariEiJ_G0022964	Chd9	84	69.231	Mus_pahari
ENSPLAG00000011118	chd9	95	69.589	MGP_SPRETEiJ_G0032483	Chd9	84	69.741	Mus_spretus
ENSPLAG00000011118	chd9	99	60.052	ENSMPUG00000003285	CHD9	84	70.695	Mustela_putorius_furo
ENSPLAG00000011118	chd9	66	74.716	ENSMLUG00000004456	CHD9	84	69.698	Myotis_lucifugus
ENSPLAG00000011118	chd9	99	88.514	ENSNBRG00000009423	chd9	99	89.168	Neolamprologus_brichardi
ENSPLAG00000011118	chd9	85	71.725	ENSNLEG00000001026	CHD9	85	72.002	Nomascus_leucogenys
ENSPLAG00000011118	chd9	72	93.985	ENSMEUG00000008222	-	74	88.125	Notamacropus_eugenii
ENSPLAG00000011118	chd9	98	68.417	ENSODEG00000004466	CHD9	84	69.857	Octodon_degus
ENSPLAG00000011118	chd9	97	88.816	ENSONIG00000002816	chd9	98	88.281	Oreochromis_niloticus
ENSPLAG00000011118	chd9	67	75.907	ENSOANG00000013401	CHD9	79	71.821	Ornithorhynchus_anatinus
ENSPLAG00000011118	chd9	99	68.193	ENSOCUG00000001016	CHD9	96	69.603	Oryctolagus_cuniculus
ENSPLAG00000011118	chd9	97	87.985	ENSORLG00000013810	chd9	97	86.380	Oryzias_latipes
ENSPLAG00000011118	chd9	97	84.158	ENSORLG00020020665	chd9	99	77.685	Oryzias_latipes_hni
ENSPLAG00000011118	chd9	98	87.642	ENSORLG00015019126	chd9	97	87.799	Oryzias_latipes_hsok
ENSPLAG00000011118	chd9	54	91.222	ENSOMEG00000015978	chd9	99	79.081	Oryzias_melastigma
ENSPLAG00000011118	chd9	98	68.669	ENSOGAG00000002110	CHD9	84	70.202	Otolemur_garnettii
ENSPLAG00000011118	chd9	98	68.224	ENSOARG00000017664	CHD9	84	70.050	Ovis_aries
ENSPLAG00000011118	chd9	95	68.976	ENSPPAG00000039388	-	96	69.799	Pan_paniscus
ENSPLAG00000011118	chd9	98	68.778	ENSPPRG00000004801	CHD9	91	69.965	Panthera_pardus
ENSPLAG00000011118	chd9	98	67.648	ENSPTIG00000021854	CHD9	84	69.444	Panthera_tigris_altaica
ENSPLAG00000011118	chd9	97	60.560	ENSPTRG00000008113	CHD9	93	69.611	Pan_troglodytes
ENSPLAG00000011118	chd9	99	68.203	ENSPANG00000019307	CHD9	97	69.451	Papio_anubis
ENSPLAG00000011118	chd9	97	70.452	ENSPKIG00000025401	-	81	71.311	Paramormyrops_kingsleyae
ENSPLAG00000011118	chd9	97	76.841	ENSPKIG00000021876	chd9	96	78.619	Paramormyrops_kingsleyae
ENSPLAG00000011118	chd9	56	77.250	ENSPSIG00000008099	CHD9	71	78.772	Pelodiscus_sinensis
ENSPLAG00000011118	chd9	85	71.222	ENSPCIG00000017215	CHD9	91	77.546	Phascolarctos_cinereus
ENSPLAG00000011118	chd9	100	99.632	ENSPFOG00000015839	chd9	100	99.632	Poecilia_formosa
ENSPLAG00000011118	chd9	99	95.936	ENSPMEG00000015106	chd9	99	94.576	Poecilia_mexicana
ENSPLAG00000011118	chd9	100	98.170	ENSPREG00000006473	chd9	100	98.170	Poecilia_reticulata
ENSPLAG00000011118	chd9	97	60.626	ENSPPYG00000007348	CHD9	85	70.054	Pongo_abelii
ENSPLAG00000011118	chd9	68	79.910	ENSPCAG00000007564	CHD9	74	81.972	Procavia_capensis
ENSPLAG00000011118	chd9	99	58.664	ENSPCOG00000028433	CHD9	91	69.258	Propithecus_coquereli
ENSPLAG00000011118	chd9	95	72.516	ENSPVAG00000015617	CHD9	81	73.885	Pteropus_vampyrus
ENSPLAG00000011118	chd9	99	88.760	ENSPNYG00000010947	chd9	99	87.796	Pundamilia_nyererei
ENSPLAG00000011118	chd9	96	78.241	ENSPNAG00000024141	chd9	97	78.005	Pygocentrus_nattereri
ENSPLAG00000011118	chd9	86	68.047	ENSRNOG00000049302	Chd9	94	56.540	Rattus_norvegicus
ENSPLAG00000011118	chd9	98	68.778	ENSRBIG00000035553	CHD9	95	70.981	Rhinopithecus_bieti
ENSPLAG00000011118	chd9	96	69.649	ENSRROG00000033278	CHD9	96	71.024	Rhinopithecus_roxellana
ENSPLAG00000011118	chd9	95	69.747	ENSSBOG00000030240	CHD9	93	69.258	Saimiri_boliviensis_boliviensis
ENSPLAG00000011118	chd9	98	68.617	ENSSHAG00000002719	CHD9	79	71.229	Sarcophilus_harrisii
ENSPLAG00000011118	chd9	95	77.889	ENSSFOG00015020209	chd9	97	78.047	Scleropages_formosus
ENSPLAG00000011118	chd9	99	72.975	ENSSFOG00015001327	chd9	96	74.166	Scleropages_formosus
ENSPLAG00000011118	chd9	96	89.930	ENSSMAG00000008953	chd9	99	88.800	Scophthalmus_maximus
ENSPLAG00000011118	chd9	99	89.421	ENSSDUG00000006139	chd9	99	90.097	Seriola_dumerili
ENSPLAG00000011118	chd9	99	90.028	ENSSLDG00000017818	chd9	99	89.827	Seriola_lalandi_dorsalis
ENSPLAG00000011118	chd9	63	77.638	ENSSARG00000010632	CHD9	55	77.140	Sorex_araneus
ENSPLAG00000011118	chd9	99	90.386	ENSSPAG00000021649	chd9	99	89.823	Stegastes_partitus
ENSPLAG00000011118	chd9	98	67.820	ENSSSCG00000033591	CHD9	61	75.650	Sus_scrofa
ENSPLAG00000011118	chd9	86	72.840	ENSTGUG00000007476	CHD9	80	73.773	Taeniopygia_guttata
ENSPLAG00000011118	chd9	99	85.494	ENSTRUG00000009125	chd9	94	80.007	Takifugu_rubripes
ENSPLAG00000011118	chd9	76	69.444	ENSTNIG00000003825	chd9	85	98.817	Tetraodon_nigroviridis
ENSPLAG00000011118	chd9	63	94.915	ENSTBEG00000016052	-	65	94.915	Tupaia_belangeri
ENSPLAG00000011118	chd9	84	71.643	ENSTTRG00000012674	CHD9	77	70.638	Tursiops_truncatus
ENSPLAG00000011118	chd9	76	66.980	ENSUAMG00000022706	CHD9	95	68.975	Ursus_americanus
ENSPLAG00000011118	chd9	77	86.373	ENSUMAG00000004043	CHD9	95	86.373	Ursus_maritimus
ENSPLAG00000011118	chd9	71	75.586	ENSVPAG00000001374	CHD9	81	69.294	Vicugna_pacos
ENSPLAG00000011118	chd9	66	75.015	ENSVVUG00000019435	CHD9	84	70.923	Vulpes_vulpes
ENSPLAG00000011118	chd9	96	67.842	ENSXETG00000000349	chd9	77	76.272	Xenopus_tropicalis
ENSPLAG00000011118	chd9	99	98.062	ENSXCOG00000012997	chd9	99	98.062	Xiphophorus_couchianus
ENSPLAG00000011118	chd9	100	98.403	ENSXMAG00000016192	chd9	100	98.485	Xiphophorus_maculatus