EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000011140 (Gene tree)
Gene ID: 106956476
Gene Symbol: slirp
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 1763 bases
Position: chrKQ546136.1:183547-185309
Accession: 106956476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000008557	RRM_1	PF00076.22	2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000002682	-	613	XM_015047351	ENSPLAP00000008557	100 (aa)	XP_014902837	UPI00072E3FFF

Gene Model

Click here to download ENSPLAG00000011140's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011140's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011140	slirp	85	56.471	ENSG00000119705	SLIRP	92	61.429	Homo_sapiens
ENSPLAG00000011140	slirp	99	76.768	ENSAPOG00000001298	slirp	99	76.768	Acanthochromis_polyacanthus
ENSPLAG00000011140	slirp	68	58.824	ENSAMEG00000003975	SLIRP	75	58.824	Ailuropoda_melanoleuca
ENSPLAG00000011140	slirp	97	76.289	ENSACIG00000023083	slirp	96	76.289	Amphilophus_citrinellus
ENSPLAG00000011140	slirp	97	76.289	ENSAOCG00000006342	slirp	98	76.289	Amphiprion_ocellaris
ENSPLAG00000011140	slirp	97	76.289	ENSAPEG00000015719	-	99	76.289	Amphiprion_percula
ENSPLAG00000011140	slirp	97	76.289	ENSAPEG00000015917	slirp	98	76.289	Amphiprion_percula
ENSPLAG00000011140	slirp	98	72.449	ENSATEG00000013525	slirp	98	72.449	Anabas_testudineus
ENSPLAG00000011140	slirp	98	60.204	ENSAMXG00000018693	slirp	98	60.204	Astyanax_mexicanus
ENSPLAG00000011140	slirp	88	54.545	ENSCJAG00000016946	SLIRP	81	54.545	Callithrix_jacchus
ENSPLAG00000011140	slirp	91	53.763	ENSCAFG00020015876	-	84	53.763	Canis_lupus_dingo
ENSPLAG00000011140	slirp	88	52.273	ENSCCAG00000030130	SLIRP	81	52.273	Cebus_capucinus
ENSPLAG00000011140	slirp	88	52.273	ENSCATG00000036327	SLIRP	72	64.179	Cercocebus_atys
ENSPLAG00000011140	slirp	88	53.409	ENSCSAG00000011736	SLIRP	81	53.409	Chlorocebus_sabaeus
ENSPLAG00000011140	slirp	79	58.228	ENSCPBG00000026327	SLIRP	80	58.228	Chrysemys_picta_bellii
ENSPLAG00000011140	slirp	67	62.687	ENSCANG00000032892	SLIRP	68	62.687	Colobus_angolensis_palliatus
ENSPLAG00000011140	slirp	99	48.039	ENSCGRG00001024068	Slirp	92	48.039	Cricetulus_griseus_chok1gshd
ENSPLAG00000011140	slirp	99	48.039	ENSCGRG00000017440	Slirp	92	48.039	Cricetulus_griseus_crigri
ENSPLAG00000011140	slirp	94	60.000	ENSCSEG00000015766	slirp	97	60.000	Cynoglossus_semilaevis
ENSPLAG00000011140	slirp	79	87.342	ENSCVAG00000012504	slirp	78	87.342	Cyprinodon_variegatus
ENSPLAG00000011140	slirp	91	75.824	ENSDARG00000097753	slirp	91	75.532	Danio_rerio
ENSPLAG00000011140	slirp	88	49.438	ENSDNOG00000007721	SLIRP	81	49.438	Dasypus_novemcinctus
ENSPLAG00000011140	slirp	76	53.947	ENSDORG00000012379	Slirp	68	53.947	Dipodomys_ordii
ENSPLAG00000011140	slirp	89	53.933	ENSETEG00000010345	SLIRP	81	53.933	Echinops_telfairi
ENSPLAG00000011140	slirp	88	52.222	ENSEASG00005020193	SLIRP	81	52.222	Equus_asinus_asinus
ENSPLAG00000011140	slirp	98	49.495	ENSEEUG00000007257	SLIRP	98	49.495	Erinaceus_europaeus
ENSPLAG00000011140	slirp	96	69.792	ENSELUG00000016800	slirp	95	69.792	Esox_lucius
ENSPLAG00000011140	slirp	76	51.316	ENSFCAG00000036326	SLIRP	78	51.316	Felis_catus
ENSPLAG00000011140	slirp	75	61.333	ENSFALG00000012583	SLIRP	85	54.444	Ficedula_albicollis
ENSPLAG00000011140	slirp	87	48.276	ENSFDAG00000008347	SLIRP	77	48.276	Fukomys_damarensis
ENSPLAG00000011140	slirp	77	85.714	ENSFHEG00000004709	slirp	84	85.714	Fundulus_heteroclitus
ENSPLAG00000011140	slirp	97	69.072	ENSGMOG00000016948	slirp	93	69.072	Gadus_morhua
ENSPLAG00000011140	slirp	88	57.955	ENSGALG00000031238	SLIRP	85	57.955	Gallus_gallus
ENSPLAG00000011140	slirp	99	90.909	ENSGAFG00000010998	slirp	99	90.909	Gambusia_affinis
ENSPLAG00000011140	slirp	79	81.013	ENSGACG00000020137	slirp	92	81.013	Gasterosteus_aculeatus
ENSPLAG00000011140	slirp	93	59.574	ENSGAGG00000009953	SLIRP	65	59.574	Gopherus_agassizii
ENSPLAG00000011140	slirp	85	56.471	ENSGGOG00000011059	-	73	61.765	Gorilla_gorilla
ENSPLAG00000011140	slirp	88	46.667	ENSHGLG00000018491	SLIRP	81	46.667	Heterocephalus_glaber_female
ENSPLAG00000011140	slirp	88	46.667	ENSHGLG00100014153	SLIRP	81	46.667	Heterocephalus_glaber_male
ENSPLAG00000011140	slirp	96	78.125	ENSHCOG00000006795	slirp	97	78.125	Hippocampus_comes
ENSPLAG00000011140	slirp	98	72.449	ENSIPUG00000010214	SLIRP	98	72.449	Ictalurus_punctatus
ENSPLAG00000011140	slirp	89	50.549	ENSSTOG00000034316	SLIRP	82	50.549	Ictidomys_tridecemlineatus
ENSPLAG00000011140	slirp	98	70.408	ENSKMAG00000002038	slirp	94	70.408	Kryptolebias_marmoratus
ENSPLAG00000011140	slirp	99	72.727	ENSLBEG00000007564	slirp	99	72.727	Labrus_bergylta
ENSPLAG00000011140	slirp	96	68.750	ENSLACG00000013434	SLIRP	92	68.750	Latimeria_chalumnae
ENSPLAG00000011140	slirp	88	53.409	ENSMFAG00000042960	SLIRP	72	64.179	Macaca_fascicularis
ENSPLAG00000011140	slirp	84	58.333	ENSMMUG00000029256	SLIRP	72	64.179	Macaca_mulatta
ENSPLAG00000011140	slirp	88	53.409	ENSMNEG00000028921	SLIRP	72	64.179	Macaca_nemestrina
ENSPLAG00000011140	slirp	74	60.811	ENSMLEG00000043644	SLIRP	68	64.179	Mandrillus_leucophaeus
ENSPLAG00000011140	slirp	97	79.381	ENSMZEG00005004617	slirp	98	79.381	Maylandia_zebra
ENSPLAG00000011140	slirp	88	52.222	ENSMAUG00000003857	Slirp	81	52.222	Mesocricetus_auratus
ENSPLAG00000011140	slirp	89	55.556	ENSMICG00000012080	SLIRP	81	55.556	Microcebus_murinus
ENSPLAG00000011140	slirp	72	55.556	ENSMOCG00000016019	Slirp	69	54.286	Microtus_ochrogaster
ENSPLAG00000011140	slirp	99	74.747	ENSMMOG00000018268	slirp	99	74.747	Mola_mola
ENSPLAG00000011140	slirp	69	55.072	ENSMODG00000005207	-	97	55.072	Monodelphis_domestica
ENSPLAG00000011140	slirp	98	75.510	ENSMALG00000012581	slirp	100	75.510	Monopterus_albus
ENSPLAG00000011140	slirp	85	53.684	MGP_CAROLIEiJ_G0017995	Slirp	88	53.684	Mus_caroli
ENSPLAG00000011140	slirp	100	47.748	ENSMUSG00000021040	Slirp	99	47.748	Mus_musculus
ENSPLAG00000011140	slirp	100	47.748	MGP_SPRETEiJ_G0018840	Slirp	99	47.748	Mus_spretus
ENSPLAG00000011140	slirp	87	50.562	ENSMLUG00000024998	-	88	48.000	Myotis_lucifugus
ENSPLAG00000011140	slirp	98	49.000	ENSMLUG00000029544	-	88	49.000	Myotis_lucifugus
ENSPLAG00000011140	slirp	85	47.674	ENSNGAG00000016363	Slirp	83	47.674	Nannospalax_galili
ENSPLAG00000011140	slirp	89	49.438	ENSNLEG00000032459	-	82	49.438	Nomascus_leucogenys
ENSPLAG00000011140	slirp	89	49.438	ENSNLEG00000027238	-	79	57.971	Nomascus_leucogenys
ENSPLAG00000011140	slirp	89	50.549	ENSODEG00000012580	SLIRP	76	57.143	Octodon_degus
ENSPLAG00000011140	slirp	97	78.351	ENSONIG00000011692	slirp	98	78.351	Oreochromis_niloticus
ENSPLAG00000011140	slirp	89	54.945	ENSOANG00000022366	SLIRP	82	54.945	Ornithorhynchus_anatinus
ENSPLAG00000011140	slirp	99	74.747	ENSORLG00000010761	slirp	77	74.747	Oryzias_latipes
ENSPLAG00000011140	slirp	99	73.737	ENSORLG00020022188	slirp	99	73.737	Oryzias_latipes_hni
ENSPLAG00000011140	slirp	98	74.490	ENSORLG00015020171	slirp	97	74.490	Oryzias_latipes_hsok
ENSPLAG00000011140	slirp	99	75.758	ENSOMEG00000019321	slirp	99	75.758	Oryzias_melastigma
ENSPLAG00000011140	slirp	85	57.647	ENSPPAG00000040710	-	78	56.977	Pan_paniscus
ENSPLAG00000011140	slirp	70	54.286	ENSPPRG00000014350	SLIRP	71	54.286	Panthera_pardus
ENSPLAG00000011140	slirp	70	54.286	ENSPTIG00000014196	SLIRP	71	54.286	Panthera_tigris_altaica
ENSPLAG00000011140	slirp	85	56.471	ENSPTRG00000030691	SLIRP	80	55.814	Pan_troglodytes
ENSPLAG00000011140	slirp	88	53.409	ENSPANG00000026323	SLIRP	72	64.179	Papio_anubis
ENSPLAG00000011140	slirp	66	74.242	ENSPKIG00000008831	slirp	65	74.242	Paramormyrops_kingsleyae
ENSPLAG00000011140	slirp	79	77.215	ENSPMGG00000010541	slirp	91	77.215	Periophthalmus_magnuspinnatus
ENSPLAG00000011140	slirp	72	55.556	ENSPEMG00000013234	Slirp	69	54.286	Peromyscus_maniculatus_bairdii
ENSPLAG00000011140	slirp	85	52.941	ENSPMAG00000009355	slirp	94	52.941	Petromyzon_marinus
ENSPLAG00000011140	slirp	78	50.000	ENSPCIG00000026842	-	84	50.000	Phascolarctos_cinereus
ENSPLAG00000011140	slirp	100	99.000	ENSPFOG00000006758	slirp	100	99.000	Poecilia_formosa
ENSPLAG00000011140	slirp	100	99.000	ENSPMEG00000019535	slirp	100	99.000	Poecilia_mexicana
ENSPLAG00000011140	slirp	100	99.000	ENSPREG00000011673	slirp	100	99.000	Poecilia_reticulata
ENSPLAG00000011140	slirp	74	59.459	ENSPPYG00000006030	SLIRP	69	58.667	Pongo_abelii
ENSPLAG00000011140	slirp	77	58.442	ENSPCOG00000015159	SLIRP	64	61.765	Propithecus_coquereli
ENSPLAG00000011140	slirp	96	71.875	ENSPNAG00000008633	slirp	97	71.875	Pygocentrus_nattereri
ENSPLAG00000011140	slirp	74	55.405	ENSRBIG00000035817	-	68	55.405	Rhinopithecus_bieti
ENSPLAG00000011140	slirp	67	62.687	ENSRBIG00000032998	-	62	62.687	Rhinopithecus_bieti
ENSPLAG00000011140	slirp	65	64.615	ENSRBIG00000031396	-	65	64.615	Rhinopithecus_bieti
ENSPLAG00000011140	slirp	88	57.955	ENSRBIG00000032222	-	81	57.955	Rhinopithecus_bieti
ENSPLAG00000011140	slirp	71	63.380	ENSRROG00000041312	-	70	63.380	Rhinopithecus_roxellana
ENSPLAG00000011140	slirp	65	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSPLAG00000011140	slirp	67	64.179	ENSRROG00000017133	-	70	64.179	Rhinopithecus_roxellana
ENSPLAG00000011140	slirp	88	57.955	ENSRROG00000036656	-	81	57.955	Rhinopithecus_roxellana
ENSPLAG00000011140	slirp	70	58.571	ENSSBOG00000020014	SLIRP	72	61.194	Saimiri_boliviensis_boliviensis
ENSPLAG00000011140	slirp	87	68.966	ENSSFOG00015011165	slirp	88	68.966	Scleropages_formosus
ENSPLAG00000011140	slirp	96	57.143	ENSSMAG00000012930	slirp	96	57.143	Scophthalmus_maximus
ENSPLAG00000011140	slirp	98	77.551	ENSSDUG00000021883	slirp	64	77.551	Seriola_dumerili
ENSPLAG00000011140	slirp	98	77.551	ENSSLDG00000023136	slirp	89	77.551	Seriola_lalandi_dorsalis
ENSPLAG00000011140	slirp	91	59.794	ENSSPUG00000009346	SLIRP	99	59.794	Sphenodon_punctatus
ENSPLAG00000011140	slirp	99	67.677	ENSSPAG00000013477	slirp	99	67.677	Stegastes_partitus
ENSPLAG00000011140	slirp	99	46.847	ENSSSCG00000028167	SLIRP	100	46.847	Sus_scrofa
ENSPLAG00000011140	slirp	78	57.692	ENSTGUG00000012337	SLIRP	87	51.087	Taeniopygia_guttata
ENSPLAG00000011140	slirp	98	67.677	ENSTRUG00000020127	slirp	98	67.677	Takifugu_rubripes
ENSPLAG00000011140	slirp	88	58.242	ENSUAMG00000022445	SLIRP	81	58.242	Ursus_americanus
ENSPLAG00000011140	slirp	88	57.143	ENSUMAG00000007166	SLIRP	81	57.143	Ursus_maritimus
ENSPLAG00000011140	slirp	89	49.438	ENSVPAG00000001781	SLIRP	81	49.438	Vicugna_pacos
ENSPLAG00000011140	slirp	89	53.261	ENSVVUG00000004436	SLIRP	82	53.261	Vulpes_vulpes
ENSPLAG00000011140	slirp	81	67.901	ENSXETG00000030343	SLIRP	91	67.901	Xenopus_tropicalis
ENSPLAG00000011140	slirp	99	91.919	ENSXCOG00000009422	slirp	99	91.919	Xiphophorus_couchianus
ENSPLAG00000011140	slirp	99	93.939	ENSXMAG00000015655	slirp	99	93.939	Xiphophorus_maculatus