EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000011176 (Gene tree)
Gene ID: 106954942
Gene Symbol: cstf2
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 16999 bases
Position: chrKQ546005.1:155373-172371
Accession: 106954942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000024738	RRM_1	PF00076.22	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000002623	-	2473	XM_015044793	ENSPLAP00000024738	508 (aa)	XP_014900279	UPI00072E7E58

Gene Model

Click here to download ENSPLAG00000011176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011176's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011176	cstf2	96	57.333	ENSG00000101811	CSTF2	81	91.803	Homo_sapiens
ENSPLAG00000011176	cstf2	96	86.354	ENSAPOG00000005630	cstf2	96	85.306	Acanthochromis_polyacanthus
ENSPLAG00000011176	cstf2	96	54.750	ENSAMEG00000002082	CSTF2	62	80.321	Ailuropoda_melanoleuca
ENSPLAG00000011176	cstf2	96	80.325	ENSACIG00000012852	cstf2	96	80.730	Amphilophus_citrinellus
ENSPLAG00000011176	cstf2	100	85.265	ENSAOCG00000020905	cstf2	96	85.306	Amphiprion_ocellaris
ENSPLAG00000011176	cstf2	100	85.265	ENSAPEG00000006526	cstf2	96	85.306	Amphiprion_percula
ENSPLAG00000011176	cstf2	100	83.236	ENSATEG00000018186	cstf2	96	82.794	Anabas_testudineus
ENSPLAG00000011176	cstf2	94	55.921	ENSAPLG00000007255	CSTF2	83	82.353	Anas_platyrhynchos
ENSPLAG00000011176	cstf2	97	75.627	ENSANAG00000022342	CSTF2	81	80.321	Aotus_nancymaae
ENSPLAG00000011176	cstf2	100	85.069	ENSACLG00000000779	cstf2	93	83.845	Astatotilapia_calliptera
ENSPLAG00000011176	cstf2	66	100.000	ENSAMXG00000021477	cstf2	72	100.000	Astyanax_mexicanus
ENSPLAG00000011176	cstf2	96	77.778	ENSCAFG00020007619	CSTF2	81	80.400	Canis_lupus_dingo
ENSPLAG00000011176	cstf2	97	56.788	ENSCPOG00000015255	CSTF2	84	92.810	Cavia_porcellus
ENSPLAG00000011176	cstf2	96	59.549	ENSCCAG00000032975	CSTF2	99	56.993	Cebus_capucinus
ENSPLAG00000011176	cstf2	96	60.140	ENSCATG00000022835	CSTF2	99	57.168	Cercocebus_atys
ENSPLAG00000011176	cstf2	96	57.095	ENSCLAG00000001904	CSTF2	85	91.026	Chinchilla_lanigera
ENSPLAG00000011176	cstf2	97	64.143	ENSCPBG00000014293	CSTF2	92	60.360	Chrysemys_picta_bellii
ENSPLAG00000011176	cstf2	96	59.722	ENSCANG00000030612	CSTF2	99	57.168	Colobus_angolensis_palliatus
ENSPLAG00000011176	cstf2	96	57.309	ENSCGRG00001023023	Cstf2	88	81.526	Cricetulus_griseus_chok1gshd
ENSPLAG00000011176	cstf2	96	89.184	ENSCVAG00000005731	cstf2	96	88.776	Cyprinodon_variegatus
ENSPLAG00000011176	cstf2	77	100.000	ENSDARG00000090788	cstf2	69	100.000	Danio_rerio
ENSPLAG00000011176	cstf2	96	58.794	ENSDORG00000007195	Cstf2	83	92.715	Dipodomys_ordii
ENSPLAG00000011176	cstf2	70	84.483	ENSETEG00000004931	CSTF2	51	80.321	Echinops_telfairi
ENSPLAG00000011176	cstf2	97	54.720	ENSEASG00005001216	CSTF2	85	80.000	Equus_asinus_asinus
ENSPLAG00000011176	cstf2	97	56.033	ENSECAG00000009325	CSTF2	85	80.000	Equus_caballus
ENSPLAG00000011176	cstf2	96	56.667	ENSFCAG00000007000	CSTF2	85	80.321	Felis_catus
ENSPLAG00000011176	cstf2	89	53.990	ENSFALG00000003859	CSTF2	85	79.167	Ficedula_albicollis
ENSPLAG00000011176	cstf2	96	75.347	ENSFDAG00000002416	CSTF2	81	80.321	Fukomys_damarensis
ENSPLAG00000011176	cstf2	95	85.628	ENSFHEG00000017065	cstf2	92	83.603	Fundulus_heteroclitus
ENSPLAG00000011176	cstf2	96	70.994	ENSGMOG00000005145	cstf2	99	72.819	Gadus_morhua
ENSPLAG00000011176	cstf2	97	58.638	ENSGALG00000006760	CSTF2	99	56.303	Gallus_gallus
ENSPLAG00000011176	cstf2	96	91.751	ENSGAFG00000020027	cstf2	96	92.153	Gambusia_affinis
ENSPLAG00000011176	cstf2	85	84.615	ENSGACG00000017326	cstf2	98	70.229	Gasterosteus_aculeatus
ENSPLAG00000011176	cstf2	97	56.349	ENSGAGG00000006037	CSTF2	96	59.821	Gopherus_agassizii
ENSPLAG00000011176	cstf2	96	59.722	ENSGGOG00000022267	CSTF2	99	57.168	Gorilla_gorilla
ENSPLAG00000011176	cstf2	100	85.127	ENSHBUG00000016183	cstf2	93	84.350	Haplochromis_burtoni
ENSPLAG00000011176	cstf2	96	56.716	ENSHGLG00000000659	-	86	89.506	Heterocephalus_glaber_female
ENSPLAG00000011176	cstf2	96	56.716	ENSHGLG00100001130	-	86	89.506	Heterocephalus_glaber_male
ENSPLAG00000011176	cstf2	96	80.364	ENSHCOG00000005157	cstf2	97	80.933	Hippocampus_comes
ENSPLAG00000011176	cstf2	96	57.621	ENSSTOG00000023445	CSTF2	85	91.026	Ictidomys_tridecemlineatus
ENSPLAG00000011176	cstf2	96	56.529	ENSJJAG00000020507	Cstf2	85	91.026	Jaculus_jaculus
ENSPLAG00000011176	cstf2	100	82.685	ENSKMAG00000001068	cstf2	96	85.253	Kryptolebias_marmoratus
ENSPLAG00000011176	cstf2	68	93.671	ENSLBEG00000028720	cstf2	87	96.610	Labrus_bergylta
ENSPLAG00000011176	cstf2	96	83.824	ENSLOCG00000015300	cstf2	81	83.824	Lepisosteus_oculatus
ENSPLAG00000011176	cstf2	96	57.286	ENSLAFG00000000474	CSTF2	85	80.400	Loxodonta_africana
ENSPLAG00000011176	cstf2	96	59.722	ENSMFAG00000043888	CSTF2	99	57.168	Macaca_fascicularis
ENSPLAG00000011176	cstf2	96	59.722	ENSMMUG00000013008	CSTF2	99	57.168	Macaca_mulatta
ENSPLAG00000011176	cstf2	96	59.722	ENSMNEG00000041824	CSTF2	99	57.168	Macaca_nemestrina
ENSPLAG00000011176	cstf2	96	59.722	ENSMLEG00000036870	CSTF2	99	57.168	Mandrillus_leucophaeus
ENSPLAG00000011176	cstf2	94	85.386	ENSMAMG00000020364	cstf2	96	84.760	Mastacembelus_armatus
ENSPLAG00000011176	cstf2	100	85.069	ENSMZEG00005007200	cstf2	96	83.845	Maylandia_zebra
ENSPLAG00000011176	cstf2	86	70.732	ENSMGAG00000004139	CSTF2	78	70.732	Meleagris_gallopavo
ENSPLAG00000011176	cstf2	96	56.478	ENSMAUG00000000965	Cstf2	99	58.014	Mesocricetus_auratus
ENSPLAG00000011176	cstf2	96	76.534	ENSMICG00000014121	CSTF2	84	77.206	Microcebus_murinus
ENSPLAG00000011176	cstf2	96	57.191	ENSMOCG00000008081	Cstf2	99	53.821	Microtus_ochrogaster
ENSPLAG00000011176	cstf2	100	71.513	ENSMMOG00000000538	cstf2	96	71.633	Mola_mola
ENSPLAG00000011176	cstf2	97	57.190	ENSMODG00000011785	CSTF2	85	85.185	Monodelphis_domestica
ENSPLAG00000011176	cstf2	95	77.737	MGP_CAROLIEiJ_G0033383	Cstf2	85	91.667	Mus_caroli
ENSPLAG00000011176	cstf2	96	58.507	ENSMUSG00000031256	Cstf2	85	91.667	Mus_musculus
ENSPLAG00000011176	cstf2	95	77.737	MGP_PahariEiJ_G0031923	Cstf2	81	81.928	Mus_pahari
ENSPLAG00000011176	cstf2	95	77.737	MGP_SPRETEiJ_G0034548	Cstf2	85	91.667	Mus_spretus
ENSPLAG00000011176	cstf2	96	77.407	ENSMPUG00000002339	CSTF2	60	80.321	Mustela_putorius_furo
ENSPLAG00000011176	cstf2	94	78.927	ENSMLUG00000004598	CSTF2	79	79.283	Myotis_lucifugus
ENSPLAG00000011176	cstf2	96	56.811	ENSNGAG00000021985	Cstf2	99	60.508	Nannospalax_galili
ENSPLAG00000011176	cstf2	93	73.554	ENSNBRG00000021694	cstf2	100	73.554	Neolamprologus_brichardi
ENSPLAG00000011176	cstf2	96	59.549	ENSNLEG00000007510	CSTF2	99	56.993	Nomascus_leucogenys
ENSPLAG00000011176	cstf2	83	75.635	ENSOPRG00000003106	CSTF2	79	75.635	Ochotona_princeps
ENSPLAG00000011176	cstf2	92	91.870	ENSONIG00000002631	cstf2	51	95.652	Oreochromis_niloticus
ENSPLAG00000011176	cstf2	96	81.301	ENSORLG00000001380	cstf2	96	82.927	Oryzias_latipes
ENSPLAG00000011176	cstf2	96	81.301	ENSORLG00020021917	cstf2	96	82.927	Oryzias_latipes_hni
ENSPLAG00000011176	cstf2	96	81.504	ENSORLG00015011996	cstf2	96	83.130	Oryzias_latipes_hsok
ENSPLAG00000011176	cstf2	100	83.431	ENSOMEG00000015507	cstf2	96	84.211	Oryzias_melastigma
ENSPLAG00000011176	cstf2	96	76.103	ENSOGAG00000011192	CSTF2	81	79.839	Otolemur_garnettii
ENSPLAG00000011176	cstf2	96	59.722	ENSPPAG00000031804	CSTF2	99	57.168	Pan_paniscus
ENSPLAG00000011176	cstf2	96	56.667	ENSPPRG00000022492	CSTF2	85	80.321	Panthera_pardus
ENSPLAG00000011176	cstf2	96	56.333	ENSPTIG00000009922	CSTF2	85	79.518	Panthera_tigris_altaica
ENSPLAG00000011176	cstf2	96	59.722	ENSPTRG00000022090	CSTF2	99	57.168	Pan_troglodytes
ENSPLAG00000011176	cstf2	96	76.642	ENSPANG00000002303	CSTF2	81	80.321	Papio_anubis
ENSPLAG00000011176	cstf2	100	69.663	ENSPKIG00000005033	cstf2	93	71.513	Paramormyrops_kingsleyae
ENSPLAG00000011176	cstf2	96	83.265	ENSPMGG00000006534	cstf2	96	82.857	Periophthalmus_magnuspinnatus
ENSPLAG00000011176	cstf2	96	56.478	ENSPEMG00000019415	Cstf2	88	81.124	Peromyscus_maniculatus_bairdii
ENSPLAG00000011176	cstf2	74	63.420	ENSPCIG00000002989	CSTF2	85	84.836	Phascolarctos_cinereus
ENSPLAG00000011176	cstf2	100	99.606	ENSPMEG00000017743	cstf2	100	99.606	Poecilia_mexicana
ENSPLAG00000011176	cstf2	100	89.785	ENSPREG00000011481	cstf2	100	89.785	Poecilia_reticulata
ENSPLAG00000011176	cstf2	97	57.976	ENSPCOG00000027744	CSTF2	99	56.567	Propithecus_coquereli
ENSPLAG00000011176	cstf2	74	48.219	ENSPVAG00000008342	CSTF2	89	54.894	Pteropus_vampyrus
ENSPLAG00000011176	cstf2	60	90.217	ENSPNYG00000010852	cstf2	94	93.151	Pundamilia_nyererei
ENSPLAG00000011176	cstf2	96	59.686	ENSRBIG00000030745	CSTF2	99	57.118	Rhinopithecus_bieti
ENSPLAG00000011176	cstf2	96	59.722	ENSRROG00000045042	CSTF2	99	57.168	Rhinopithecus_roxellana
ENSPLAG00000011176	cstf2	96	76.642	ENSSBOG00000021649	CSTF2	81	80.321	Saimiri_boliviensis_boliviensis
ENSPLAG00000011176	cstf2	86	82.692	ENSSHAG00000003681	CSTF2	78	83.913	Sarcophilus_harrisii
ENSPLAG00000011176	cstf2	96	69.720	ENSSFOG00015006348	cstf2	97	69.492	Scleropages_formosus
ENSPLAG00000011176	cstf2	100	79.371	ENSSMAG00000013463	cstf2	96	85.102	Scophthalmus_maximus
ENSPLAG00000011176	cstf2	96	59.369	ENSSSCG00000012486	CSTF2	84	82.158	Sus_scrofa
ENSPLAG00000011176	cstf2	97	59.966	ENSTGUG00000002253	CSTF2	88	81.961	Taeniopygia_guttata
ENSPLAG00000011176	cstf2	57	98.780	ENSTBEG00000010029	-	62	98.780	Tupaia_belangeri
ENSPLAG00000011176	cstf2	96	77.407	ENSUAMG00000026605	CSTF2	62	80.321	Ursus_americanus
ENSPLAG00000011176	cstf2	91	76.000	ENSUMAG00000012417	CSTF2	88	79.920	Ursus_maritimus
ENSPLAG00000011176	cstf2	88	82.353	ENSXETG00000009642	cstf2	99	65.970	Xenopus_tropicalis
ENSPLAG00000011176	cstf2	96	71.691	ENSXCOG00000016436	cstf2	94	98.824	Xiphophorus_couchianus
ENSPLAG00000011176	cstf2	100	93.421	ENSXMAG00000013524	cstf2	100	93.421	Xiphophorus_maculatus