EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000011449 (Gene tree)
Gene ID: 106962498
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 8363 bases
Position: chrKQ546736.1:112267-120629
Accession: 106962498
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000008783	KH_1	PF00013.29	7.8e-47	1	3
ENSPLAP00000008783	KH_1	PF00013.29	7.8e-47	2	3
ENSPLAP00000008783	KH_1	PF00013.29	7.8e-47	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000002303	-	1176	XM_015056949	ENSPLAP00000008783	391 (aa)	XP_014912435	-

Gene Model

Click here to download ENSPLAG00000011449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000011449	pcbp3	70	55.755	ENSPLAG00000023316	pcbp4	59	55.755
ENSPLAG00000011449	pcbp3	87	67.147	ENSPLAG00000017518	PCBP2	96	67.147
ENSPLAG00000011449	pcbp3	56	55.556	ENSPLAG00000023099	hnrnpk	50	55.556
ENSPLAG00000011449	pcbp3	71	67.873	ENSPLAG00000017488	zgc:110045	92	67.873
ENSPLAG00000011449	pcbp3	87	66.282	ENSPLAG00000003153	pcbp2	96	66.282
ENSPLAG00000011449	pcbp3	55	39.062	ENSPLAG00000016612	fubp3	66	39.062
ENSPLAG00000011449	pcbp3	50	41.270	ENSPLAG00000008443	-	52	41.270
ENSPLAG00000011449	pcbp3	60	50.000	ENSPLAG00000004540	hnrpkl	85	31.063
ENSPLAG00000011449	pcbp3	51	38.095	ENSPLAG00000010763	khsrp	51	38.095
ENSPLAG00000011449	pcbp3	90	82.906	ENSPLAG00000004074	-	92	82.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011449	pcbp3	98	78.608	ENSAPOG00000020003	pcbp3	99	78.608	Acanthochromis_polyacanthus
ENSPLAG00000011449	pcbp3	100	76.500	ENSAPOG00000016582	-	100	81.389	Acanthochromis_polyacanthus
ENSPLAG00000011449	pcbp3	87	81.534	ENSAMEG00000001697	-	97	78.611	Ailuropoda_melanoleuca
ENSPLAG00000011449	pcbp3	100	84.694	ENSACIG00000010933	pcbp3	100	84.694	Amphilophus_citrinellus
ENSPLAG00000011449	pcbp3	91	81.894	ENSACIG00000002739	-	100	81.894	Amphilophus_citrinellus
ENSPLAG00000011449	pcbp3	82	84.424	ENSAOCG00000007806	-	100	84.424	Amphiprion_ocellaris
ENSPLAG00000011449	pcbp3	88	83.944	ENSAOCG00000008592	-	98	83.944	Amphiprion_ocellaris
ENSPLAG00000011449	pcbp3	91	80.556	ENSAPEG00000005209	-	100	80.556	Amphiprion_percula
ENSPLAG00000011449	pcbp3	100	84.000	ENSAPEG00000008011	pcbp3	100	84.000	Amphiprion_percula
ENSPLAG00000011449	pcbp3	91	81.232	ENSATEG00000009833	-	100	81.232	Anabas_testudineus
ENSPLAG00000011449	pcbp3	88	92.464	ENSATEG00000015787	-	100	92.464	Anabas_testudineus
ENSPLAG00000011449	pcbp3	89	71.916	ENSAPLG00000008951	-	80	71.916	Anas_platyrhynchos
ENSPLAG00000011449	pcbp3	87	80.627	ENSAPLG00000002975	-	97	80.627	Anas_platyrhynchos
ENSPLAG00000011449	pcbp3	87	86.236	ENSACAG00000004607	-	97	86.236	Anolis_carolinensis
ENSPLAG00000011449	pcbp3	87	78.000	ENSACAG00000009819	-	96	78.000	Anolis_carolinensis
ENSPLAG00000011449	pcbp3	70	89.051	ENSANAG00000030702	-	98	89.051	Aotus_nancymaae
ENSPLAG00000011449	pcbp3	100	76.000	ENSACLG00000003801	-	100	81.461	Astatotilapia_calliptera
ENSPLAG00000011449	pcbp3	100	83.250	ENSACLG00000011835	pcbp3	100	83.250	Astatotilapia_calliptera
ENSPLAG00000011449	pcbp3	88	61.580	ENSAMXG00000001760	zgc:110045	74	61.580	Astyanax_mexicanus
ENSPLAG00000011449	pcbp3	100	81.750	ENSAMXG00000003440	pcbp3	100	81.750	Astyanax_mexicanus
ENSPLAG00000011449	pcbp3	88	81.686	ENSAMXG00000013588	-	100	81.686	Astyanax_mexicanus
ENSPLAG00000011449	pcbp3	80	80.303	ENSCAFG00020019472	-	85	80.303	Canis_lupus_dingo
ENSPLAG00000011449	pcbp3	89	78.711	ENSCSAG00000007440	-	89	78.711	Chlorocebus_sabaeus
ENSPLAG00000011449	pcbp3	89	80.282	ENSCPBG00000000733	-	74	77.183	Chrysemys_picta_bellii
ENSPLAG00000011449	pcbp3	87	81.020	ENSCPBG00000012151	-	97	81.020	Chrysemys_picta_bellii
ENSPLAG00000011449	pcbp3	88	83.862	ENSCSEG00000000822	pcbp3	99	83.862	Cynoglossus_semilaevis
ENSPLAG00000011449	pcbp3	89	72.346	ENSCSEG00000016984	-	98	72.346	Cynoglossus_semilaevis
ENSPLAG00000011449	pcbp3	100	76.000	ENSCVAG00000005262	-	100	80.000	Cyprinodon_variegatus
ENSPLAG00000011449	pcbp3	100	84.211	ENSCVAG00000014482	pcbp3	100	84.211	Cyprinodon_variegatus
ENSPLAG00000011449	pcbp3	100	82.000	ENSDARG00000054378	pcbp3	90	97.333	Danio_rerio
ENSPLAG00000011449	pcbp3	87	69.054	ENSETEG00000015988	-	97	69.054	Echinops_telfairi
ENSPLAG00000011449	pcbp3	89	66.017	ENSEBUG00000007485	-	92	68.033	Eptatretus_burgeri
ENSPLAG00000011449	pcbp3	80	65.064	ENSEBUG00000016192	pcbp3	99	65.472	Eptatretus_burgeri
ENSPLAG00000011449	pcbp3	65	60.755	ENSEBUG00000005495	pcbp3	72	60.755	Eptatretus_burgeri
ENSPLAG00000011449	pcbp3	100	82.587	ENSELUG00000003521	pcbp3	100	82.587	Esox_lucius
ENSPLAG00000011449	pcbp3	100	76.250	ENSELUG00000001560	-	96	86.416	Esox_lucius
ENSPLAG00000011449	pcbp3	89	78.933	ENSFALG00000003949	-	98	78.933	Ficedula_albicollis
ENSPLAG00000011449	pcbp3	89	72.178	ENSFALG00000004411	-	76	72.178	Ficedula_albicollis
ENSPLAG00000011449	pcbp3	89	85.920	ENSFHEG00000016615	pcbp3	96	85.920	Fundulus_heteroclitus
ENSPLAG00000011449	pcbp3	91	80.278	ENSFHEG00000006539	-	100	80.278	Fundulus_heteroclitus
ENSPLAG00000011449	pcbp3	87	66.479	ENSGMOG00000008611	-	100	66.479	Gadus_morhua
ENSPLAG00000011449	pcbp3	88	75.000	ENSGMOG00000011992	pcbp3	96	75.000	Gadus_morhua
ENSPLAG00000011449	pcbp3	87	87.931	ENSGALG00000004394	-	97	87.931	Gallus_gallus
ENSPLAG00000011449	pcbp3	87	79.472	ENSGALG00000013155	-	99	79.472	Gallus_gallus
ENSPLAG00000011449	pcbp3	100	76.000	ENSGAFG00000010274	-	100	76.000	Gambusia_affinis
ENSPLAG00000011449	pcbp3	91	92.778	ENSGAFG00000011430	pcbp3	99	92.778	Gambusia_affinis
ENSPLAG00000011449	pcbp3	90	81.389	ENSGACG00000014955	-	99	81.389	Gasterosteus_aculeatus
ENSPLAG00000011449	pcbp3	88	81.972	ENSGACG00000002266	-	96	81.972	Gasterosteus_aculeatus
ENSPLAG00000011449	pcbp3	72	80.769	ENSGAGG00000006956	-	93	80.769	Gopherus_agassizii
ENSPLAG00000011449	pcbp3	79	76.873	ENSGAGG00000000271	-	100	76.873	Gopherus_agassizii
ENSPLAG00000011449	pcbp3	100	76.000	ENSHBUG00000021782	-	100	81.461	Haplochromis_burtoni
ENSPLAG00000011449	pcbp3	100	83.709	ENSHBUG00000010697	pcbp3	100	83.709	Haplochromis_burtoni
ENSPLAG00000011449	pcbp3	91	76.584	ENSHCOG00000006067	-	100	76.584	Hippocampus_comes
ENSPLAG00000011449	pcbp3	100	84.211	ENSHCOG00000017868	pcbp3	100	84.211	Hippocampus_comes
ENSPLAG00000011449	pcbp3	91	85.440	ENSIPUG00000006238	pcbp3	100	85.440	Ictalurus_punctatus
ENSPLAG00000011449	pcbp3	100	75.250	ENSKMAG00000018530	-	100	77.654	Kryptolebias_marmoratus
ENSPLAG00000011449	pcbp3	100	83.750	ENSKMAG00000003046	pcbp3	100	83.750	Kryptolebias_marmoratus
ENSPLAG00000011449	pcbp3	100	68.782	ENSLBEG00000006542	-	100	72.346	Labrus_bergylta
ENSPLAG00000011449	pcbp3	88	85.260	ENSLBEG00000006201	pcbp3	95	85.260	Labrus_bergylta
ENSPLAG00000011449	pcbp3	89	71.958	ENSLACG00000010804	zgc:110045	75	71.958	Latimeria_chalumnae
ENSPLAG00000011449	pcbp3	86	80.707	ENSLACG00000010386	pcbp3	73	80.707	Latimeria_chalumnae
ENSPLAG00000011449	pcbp3	89	85.154	ENSLOCG00000009369	pcbp3	99	85.154	Lepisosteus_oculatus
ENSPLAG00000011449	pcbp3	86	77.907	ENSLOCG00000005058	zgc:110045	79	77.907	Lepisosteus_oculatus
ENSPLAG00000011449	pcbp3	91	80.112	ENSMAMG00000011620	-	100	80.112	Mastacembelus_armatus
ENSPLAG00000011449	pcbp3	95	81.769	ENSMAMG00000022336	pcbp3	99	81.501	Mastacembelus_armatus
ENSPLAG00000011449	pcbp3	100	83.500	ENSMZEG00005008993	pcbp3	98	90.598	Maylandia_zebra
ENSPLAG00000011449	pcbp3	100	76.726	ENSMZEG00005014882	-	100	82.123	Maylandia_zebra
ENSPLAG00000011449	pcbp3	89	72.178	ENSMGAG00000006794	-	76	72.178	Meleagris_gallopavo
ENSPLAG00000011449	pcbp3	86	75.568	ENSMGAG00000001883	-	95	75.568	Meleagris_gallopavo
ENSPLAG00000011449	pcbp3	88	83.944	ENSMMOG00000000730	pcbp3	88	83.944	Mola_mola
ENSPLAG00000011449	pcbp3	91	81.461	ENSMMOG00000005216	-	100	81.461	Mola_mola
ENSPLAG00000011449	pcbp3	69	88.426	ENSMODG00000027884	-	94	88.426	Monodelphis_domestica
ENSPLAG00000011449	pcbp3	100	85.459	ENSMALG00000000691	pcbp3	100	85.459	Monopterus_albus
ENSPLAG00000011449	pcbp3	87	78.963	ENSMPUG00000001779	-	89	78.963	Mustela_putorius_furo
ENSPLAG00000011449	pcbp3	100	85.422	ENSNBRG00000016409	-	100	85.422	Neolamprologus_brichardi
ENSPLAG00000011449	pcbp3	100	78.894	ENSNBRG00000016714	-	99	81.250	Neolamprologus_brichardi
ENSPLAG00000011449	pcbp3	86	88.270	ENSOPRG00000003431	-	99	88.270	Ochotona_princeps
ENSPLAG00000011449	pcbp3	88	89.503	ENSONIG00000012122	-	98	89.503	Oreochromis_niloticus
ENSPLAG00000011449	pcbp3	91	81.471	ENSONIG00000004611	-	100	81.471	Oreochromis_niloticus
ENSPLAG00000011449	pcbp3	87	79.714	ENSOCUG00000002696	-	88	79.714	Oryctolagus_cuniculus
ENSPLAG00000011449	pcbp3	88	83.853	ENSORLG00000000059	pcbp3	100	83.853	Oryzias_latipes
ENSPLAG00000011449	pcbp3	99	75.439	ENSORLG00000022739	-	100	79.670	Oryzias_latipes
ENSPLAG00000011449	pcbp3	88	83.853	ENSORLG00020012671	pcbp3	97	83.853	Oryzias_latipes_hni
ENSPLAG00000011449	pcbp3	99	75.188	ENSORLG00020006124	-	100	81.180	Oryzias_latipes_hni
ENSPLAG00000011449	pcbp3	88	83.853	ENSORLG00015000429	pcbp3	97	83.853	Oryzias_latipes_hsok
ENSPLAG00000011449	pcbp3	99	75.439	ENSORLG00015008051	-	99	75.439	Oryzias_latipes_hsok
ENSPLAG00000011449	pcbp3	80	86.667	ENSOMEG00000020811	pcbp3	95	86.667	Oryzias_melastigma
ENSPLAG00000011449	pcbp3	91	80.899	ENSOMEG00000020162	-	100	80.899	Oryzias_melastigma
ENSPLAG00000011449	pcbp3	87	78.830	ENSOGAG00000008044	-	97	78.830	Otolemur_garnettii
ENSPLAG00000011449	pcbp3	66	79.412	ENSPKIG00000020913	-	91	79.412	Paramormyrops_kingsleyae
ENSPLAG00000011449	pcbp3	100	75.940	ENSPKIG00000019329	pcbp3	100	80.618	Paramormyrops_kingsleyae
ENSPLAG00000011449	pcbp3	87	72.365	ENSPSIG00000014970	-	97	72.934	Pelodiscus_sinensis
ENSPLAG00000011449	pcbp3	70	78.309	ENSPSIG00000008350	-	70	78.309	Pelodiscus_sinensis
ENSPLAG00000011449	pcbp3	100	83.250	ENSPMGG00000022383	pcbp3	100	83.250	Periophthalmus_magnuspinnatus
ENSPLAG00000011449	pcbp3	61	81.579	ENSPMAG00000004637	-	97	81.579	Petromyzon_marinus
ENSPLAG00000011449	pcbp3	86	63.218	ENSPMAG00000004551	pcbp3	88	63.218	Petromyzon_marinus
ENSPLAG00000011449	pcbp3	87	86.040	ENSPCIG00000028092	-	97	86.040	Phascolarctos_cinereus
ENSPLAG00000011449	pcbp3	100	94.148	ENSPMEG00000021239	pcbp3	100	94.148	Poecilia_mexicana
ENSPLAG00000011449	pcbp3	100	78.005	ENSPMEG00000006653	-	97	86.087	Poecilia_mexicana
ENSPLAG00000011449	pcbp3	88	87.608	ENSPREG00000015736	pcbp3	100	87.608	Poecilia_reticulata
ENSPLAG00000011449	pcbp3	91	81.180	ENSPREG00000020585	-	100	81.180	Poecilia_reticulata
ENSPLAG00000011449	pcbp3	91	81.461	ENSPNYG00000013205	-	100	81.461	Pundamilia_nyererei
ENSPLAG00000011449	pcbp3	88	83.944	ENSPNYG00000012326	pcbp3	96	83.944	Pundamilia_nyererei
ENSPLAG00000011449	pcbp3	91	80.220	ENSPNAG00000015104	pcbp3	100	80.220	Pygocentrus_nattereri
ENSPLAG00000011449	pcbp3	100	79.750	ENSPNAG00000008541	-	100	79.750	Pygocentrus_nattereri
ENSPLAG00000011449	pcbp3	87	79.772	ENSRNOG00000001245	Pcbp3	97	79.772	Rattus_norvegicus
ENSPLAG00000011449	pcbp3	89	77.717	ENSRBIG00000028177	-	99	77.717	Rhinopithecus_bieti
ENSPLAG00000011449	pcbp3	87	81.250	ENSSHAG00000007890	-	97	81.250	Sarcophilus_harrisii
ENSPLAG00000011449	pcbp3	100	80.201	ENSSFOG00015014706	pcbp3	100	80.201	Scleropages_formosus
ENSPLAG00000011449	pcbp3	86	73.099	ENSSFOG00015007118	-	93	73.099	Scleropages_formosus
ENSPLAG00000011449	pcbp3	100	76.441	ENSSFOG00015010205	pcbp3	100	88.286	Scleropages_formosus
ENSPLAG00000011449	pcbp3	88	85.838	ENSSMAG00000011929	pcbp3	98	85.838	Scophthalmus_maximus
ENSPLAG00000011449	pcbp3	100	75.750	ENSSMAG00000003135	-	100	80.223	Scophthalmus_maximus
ENSPLAG00000011449	pcbp3	100	77.157	ENSSDUG00000008502	-	100	77.157	Seriola_dumerili
ENSPLAG00000011449	pcbp3	88	92.754	ENSSDUG00000011608	pcbp3	99	92.754	Seriola_dumerili
ENSPLAG00000011449	pcbp3	100	76.500	ENSSLDG00000020161	-	100	76.500	Seriola_lalandi_dorsalis
ENSPLAG00000011449	pcbp3	88	92.754	ENSSLDG00000008518	pcbp3	99	92.754	Seriola_lalandi_dorsalis
ENSPLAG00000011449	pcbp3	89	73.585	ENSSPUG00000013214	-	91	80.719	Sphenodon_punctatus
ENSPLAG00000011449	pcbp3	100	74.937	ENSSPAG00000023341	-	100	74.937	Stegastes_partitus
ENSPLAG00000011449	pcbp3	82	84.424	ENSSPAG00000004190	-	100	84.424	Stegastes_partitus
ENSPLAG00000011449	pcbp3	87	74.359	ENSTGUG00000008158	-	97	74.359	Taeniopygia_guttata
ENSPLAG00000011449	pcbp3	87	79.320	ENSTGUG00000003316	-	97	79.320	Taeniopygia_guttata
ENSPLAG00000011449	pcbp3	83	82.515	ENSTRUG00000006280	-	91	82.515	Takifugu_rubripes
ENSPLAG00000011449	pcbp3	100	80.101	ENSTRUG00000013604	pcbp3	99	85.903	Takifugu_rubripes
ENSPLAG00000011449	pcbp3	87	85.511	ENSTTRG00000015075	-	97	85.511	Tursiops_truncatus
ENSPLAG00000011449	pcbp3	87	79.603	ENSXETG00000011483	pcbp1	97	79.603	Xenopus_tropicalis
ENSPLAG00000011449	pcbp3	83	73.563	ENSXETG00000010491	pcbp2	73	73.563	Xenopus_tropicalis
ENSPLAG00000011449	pcbp3	100	83.042	ENSXCOG00000020481	pcbp3	100	83.042	Xiphophorus_couchianus
ENSPLAG00000011449	pcbp3	100	84.000	ENSXMAG00000008175	pcbp3	100	84.000	Xiphophorus_maculatus
ENSPLAG00000011449	pcbp3	100	76.250	ENSXMAG00000028711	-	98	85.960	Xiphophorus_maculatus