EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000011620 (Gene tree)
Gene ID: 106937162
Gene Symbol: prpf4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 8135 bases
Position: chrKQ547591.1:156-8290
Accession: 106937162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000024790	PRP4	PF08799.11	1.3e-14	1	1
ENSPLAP00000024812	PRP4	PF08799.11	1.3e-14	1	1
ENSPLAP00000008717	PRP4	PF08799.11	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000002497	-	954	-	ENSPLAP00000024790	317 (aa)	-	-
ENSPLAT00000002414	-	1020	XM_015018542	ENSPLAP00000008717	339 (aa)	XP_014874028	-
ENSPLAT00000002442	-	984	-	ENSPLAP00000024812	327 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000011620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011620's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011620	prpf4	96	72.360	ENSG00000136875	PRPF4	84	70.118	Homo_sapiens
ENSPLAG00000011620	prpf4	97	86.997	ENSAPOG00000014132	prpf4	86	87.077	Acanthochromis_polyacanthus
ENSPLAG00000011620	prpf4	96	72.050	ENSAMEG00000013048	PRPF4	81	71.560	Ailuropoda_melanoleuca
ENSPLAG00000011620	prpf4	97	86.687	ENSACIG00000005579	prpf4	84	86.769	Amphilophus_citrinellus
ENSPLAG00000011620	prpf4	96	88.199	ENSAOCG00000005457	prpf4	85	88.000	Amphiprion_ocellaris
ENSPLAG00000011620	prpf4	96	87.888	ENSAPEG00000000776	prpf4	85	87.692	Amphiprion_percula
ENSPLAG00000011620	prpf4	97	86.997	ENSATEG00000023013	prpf4	85	87.077	Anabas_testudineus
ENSPLAG00000011620	prpf4	99	69.419	ENSAPLG00000006534	PRPF4	82	70.536	Anas_platyrhynchos
ENSPLAG00000011620	prpf4	97	69.231	ENSACAG00000015110	PRPF4	82	69.231	Anolis_carolinensis
ENSPLAG00000011620	prpf4	96	72.050	ENSANAG00000022464	PRPF4	60	71.560	Aotus_nancymaae
ENSPLAG00000011620	prpf4	96	88.820	ENSACLG00000019031	prpf4	84	88.820	Astatotilapia_calliptera
ENSPLAG00000011620	prpf4	100	72.424	ENSAMXG00000006756	prpf4	91	74.847	Astyanax_mexicanus
ENSPLAG00000011620	prpf4	96	72.050	ENSBTAG00000004571	PRPF4	83	71.560	Bos_taurus
ENSPLAG00000011620	prpf4	82	41.577	WBGene00007972	prp-4	55	41.971	Caenorhabditis_elegans
ENSPLAG00000011620	prpf4	96	72.050	ENSCJAG00000017856	PRPF4	84	69.822	Callithrix_jacchus
ENSPLAG00000011620	prpf4	96	72.050	ENSCAFG00000003224	PRPF4	80	71.560	Canis_familiaris
ENSPLAG00000011620	prpf4	96	72.050	ENSCAFG00020022637	PRPF4	83	71.560	Canis_lupus_dingo
ENSPLAG00000011620	prpf4	96	72.050	ENSCHIG00000024648	-	64	69.822	Capra_hircus
ENSPLAG00000011620	prpf4	96	72.050	ENSTSYG00000010366	PRPF4	83	71.560	Carlito_syrichta
ENSPLAG00000011620	prpf4	83	64.643	ENSCAPG00000008935	PRPF4	65	64.643	Cavia_aperea
ENSPLAG00000011620	prpf4	97	66.358	ENSCPOG00000014729	-	63	67.901	Cavia_porcellus
ENSPLAG00000011620	prpf4	96	72.050	ENSCPOG00000010747	-	62	71.560	Cavia_porcellus
ENSPLAG00000011620	prpf4	96	71.739	ENSCCAG00000028990	PRPF4	83	71.254	Cebus_capucinus
ENSPLAG00000011620	prpf4	96	72.050	ENSCATG00000021552	PRPF4	83	71.560	Cercocebus_atys
ENSPLAG00000011620	prpf4	96	72.050	ENSCLAG00000013448	PRPF4	82	69.659	Chinchilla_lanigera
ENSPLAG00000011620	prpf4	81	71.218	ENSCHOG00000007233	PRPF4	83	71.218	Choloepus_hoffmanni
ENSPLAG00000011620	prpf4	99	69.277	ENSCPBG00000019136	PRPF4	50	71.166	Chrysemys_picta_bellii
ENSPLAG00000011620	prpf4	93	55.238	ENSCING00000001299	-	91	55.238	Ciona_intestinalis
ENSPLAG00000011620	prpf4	98	53.191	ENSCSAVG00000009178	-	87	53.474	Ciona_savignyi
ENSPLAG00000011620	prpf4	96	72.050	ENSCANG00000003246	PRPF4	83	71.560	Colobus_angolensis_palliatus
ENSPLAG00000011620	prpf4	96	72.050	ENSCGRG00001016992	Prpf4	82	69.659	Cricetulus_griseus_chok1gshd
ENSPLAG00000011620	prpf4	96	72.050	ENSCGRG00000017560	Prpf4	82	69.659	Cricetulus_griseus_crigri
ENSPLAG00000011620	prpf4	99	77.812	ENSCSEG00000020451	prpf4	93	79.692	Cynoglossus_semilaevis
ENSPLAG00000011620	prpf4	99	72.948	ENSDARG00000067639	prpf4	93	75.466	Danio_rerio
ENSPLAG00000011620	prpf4	96	72.050	ENSDNOG00000013203	PRPF4	84	70.571	Dasypus_novemcinctus
ENSPLAG00000011620	prpf4	96	72.360	ENSDORG00000026275	Prpf4	62	71.865	Dipodomys_ordii
ENSPLAG00000011620	prpf4	99	41.333	FBgn0036733	U4-U6-60K	94	44.118	Drosophila_melanogaster
ENSPLAG00000011620	prpf4	96	72.050	ENSETEG00000020389	PRPF4	64	70.536	Echinops_telfairi
ENSPLAG00000011620	prpf4	99	62.805	ENSEBUG00000015229	prpf4	64	65.031	Eptatretus_burgeri
ENSPLAG00000011620	prpf4	96	72.050	ENSEASG00005022678	PRPF4	83	71.560	Equus_asinus_asinus
ENSPLAG00000011620	prpf4	96	72.050	ENSECAG00000007072	PRPF4	83	71.560	Equus_caballus
ENSPLAG00000011620	prpf4	78	80.328	ENSEEUG00000007480	PRPF4	57	80.328	Erinaceus_europaeus
ENSPLAG00000011620	prpf4	99	71.429	ENSELUG00000007510	prpf4	93	74.154	Esox_lucius
ENSPLAG00000011620	prpf4	96	72.050	ENSFCAG00000005514	PRPF4	84	69.822	Felis_catus
ENSPLAG00000011620	prpf4	99	68.502	ENSFALG00000005423	PRPF4	64	69.345	Ficedula_albicollis
ENSPLAG00000011620	prpf4	96	72.050	ENSFDAG00000005839	PRPF4	82	69.659	Fukomys_damarensis
ENSPLAG00000011620	prpf4	99	85.106	ENSFHEG00000001300	prpf4	84	87.888	Fundulus_heteroclitus
ENSPLAG00000011620	prpf4	99	69.113	ENSGALG00000008857	PRPF4	80	71.077	Gallus_gallus
ENSPLAG00000011620	prpf4	100	93.333	ENSGAFG00000012164	prpf4	67	96.319	Gambusia_affinis
ENSPLAG00000011620	prpf4	97	72.086	ENSGACG00000015476	prpf4	93	72.256	Gasterosteus_aculeatus
ENSPLAG00000011620	prpf4	99	68.098	ENSGAGG00000025029	PRPF4	80	71.125	Gopherus_agassizii
ENSPLAG00000011620	prpf4	96	72.360	ENSGGOG00000006943	PRPF4	82	69.969	Gorilla_gorilla
ENSPLAG00000011620	prpf4	96	88.820	ENSHBUG00000000562	prpf4	86	88.820	Haplochromis_burtoni
ENSPLAG00000011620	prpf4	96	59.317	ENSHGLG00000003838	-	61	59.021	Heterocephalus_glaber_female
ENSPLAG00000011620	prpf4	96	72.360	ENSHGLG00000015191	PRPF4	82	69.969	Heterocephalus_glaber_female
ENSPLAG00000011620	prpf4	91	64.610	ENSHGLG00000016628	-	63	64.610	Heterocephalus_glaber_female
ENSPLAG00000011620	prpf4	96	59.317	ENSHGLG00100005571	-	61	59.021	Heterocephalus_glaber_male
ENSPLAG00000011620	prpf4	99	70.517	ENSIPUG00000017956	PRPF4	93	72.671	Ictalurus_punctatus
ENSPLAG00000011620	prpf4	96	72.050	ENSSTOG00000027833	PRPF4	83	71.560	Ictidomys_tridecemlineatus
ENSPLAG00000011620	prpf4	96	72.050	ENSJJAG00000008838	Prpf4	64	71.560	Jaculus_jaculus
ENSPLAG00000011620	prpf4	97	86.378	ENSKMAG00000013236	prpf4	84	86.378	Kryptolebias_marmoratus
ENSPLAG00000011620	prpf4	97	86.997	ENSLBEG00000020611	prpf4	84	87.077	Labrus_bergylta
ENSPLAG00000011620	prpf4	99	62.236	ENSLACG00000016317	PRPF4	62	63.609	Latimeria_chalumnae
ENSPLAG00000011620	prpf4	99	73.860	ENSLOCG00000000581	prpf4	93	76.087	Lepisosteus_oculatus
ENSPLAG00000011620	prpf4	96	72.050	ENSLAFG00000018225	PRPF4	84	70.571	Loxodonta_africana
ENSPLAG00000011620	prpf4	96	72.050	ENSMFAG00000039397	PRPF4	83	71.560	Macaca_fascicularis
ENSPLAG00000011620	prpf4	96	72.050	ENSMMUG00000005844	PRPF4	83	71.560	Macaca_mulatta
ENSPLAG00000011620	prpf4	96	59.006	ENSMNEG00000033737	PRPF4	81	58.716	Macaca_nemestrina
ENSPLAG00000011620	prpf4	96	72.050	ENSMLEG00000040284	PRPF4	83	71.560	Mandrillus_leucophaeus
ENSPLAG00000011620	prpf4	97	85.139	ENSMAMG00000020141	prpf4	93	85.231	Mastacembelus_armatus
ENSPLAG00000011620	prpf4	96	88.820	ENSMZEG00005023205	prpf4	84	88.820	Maylandia_zebra
ENSPLAG00000011620	prpf4	99	68.196	ENSMGAG00000001796	PRPF4	80	70.154	Meleagris_gallopavo
ENSPLAG00000011620	prpf4	96	72.050	ENSMAUG00000018022	Prpf4	82	69.659	Mesocricetus_auratus
ENSPLAG00000011620	prpf4	96	72.050	ENSMICG00000015022	PRPF4	84	69.822	Microcebus_murinus
ENSPLAG00000011620	prpf4	96	72.050	ENSMOCG00000018273	Prpf4	82	69.659	Microtus_ochrogaster
ENSPLAG00000011620	prpf4	97	84.211	ENSMMOG00000021177	prpf4	93	84.308	Mola_mola
ENSPLAG00000011620	prpf4	97	69.659	ENSMODG00000025096	-	80	70.031	Monodelphis_domestica
ENSPLAG00000011620	prpf4	97	69.969	ENSMODG00000004444	-	62	70.336	Monodelphis_domestica
ENSPLAG00000011620	prpf4	97	86.378	ENSMALG00000013624	prpf4	93	86.462	Monopterus_albus
ENSPLAG00000011620	prpf4	96	72.050	MGP_CAROLIEiJ_G0026078	Prpf4	82	69.659	Mus_caroli
ENSPLAG00000011620	prpf4	96	72.050	ENSMUSG00000066148	Prpf4	82	69.659	Mus_musculus
ENSPLAG00000011620	prpf4	96	72.360	MGP_PahariEiJ_G0028413	Prpf4	82	69.969	Mus_pahari
ENSPLAG00000011620	prpf4	96	72.050	MGP_SPRETEiJ_G0027042	Prpf4	82	69.659	Mus_spretus
ENSPLAG00000011620	prpf4	96	72.050	ENSMPUG00000007883	PRPF4	83	71.560	Mustela_putorius_furo
ENSPLAG00000011620	prpf4	96	71.118	ENSMLUG00000008626	-	61	70.642	Myotis_lucifugus
ENSPLAG00000011620	prpf4	96	71.739	ENSMLUG00000015309	-	80	71.254	Myotis_lucifugus
ENSPLAG00000011620	prpf4	96	65.165	ENSNGAG00000000468	Prpf4	90	64.793	Nannospalax_galili
ENSPLAG00000011620	prpf4	96	88.820	ENSNBRG00000007972	prpf4	84	88.820	Neolamprologus_brichardi
ENSPLAG00000011620	prpf4	96	72.050	ENSNLEG00000016647	PRPF4	83	71.560	Nomascus_leucogenys
ENSPLAG00000011620	prpf4	97	70.588	ENSMEUG00000013256	PRPF4	84	70.948	Notamacropus_eugenii
ENSPLAG00000011620	prpf4	96	72.050	ENSOPRG00000005302	PRPF4	84	69.822	Ochotona_princeps
ENSPLAG00000011620	prpf4	96	72.050	ENSODEG00000018147	PRPF4	82	69.659	Octodon_degus
ENSPLAG00000011620	prpf4	96	89.130	ENSONIG00000012671	prpf4	84	89.130	Oreochromis_niloticus
ENSPLAG00000011620	prpf4	96	72.360	ENSOCUG00000005046	PRPF4	83	71.865	Oryctolagus_cuniculus
ENSPLAG00000011620	prpf4	97	82.663	ENSORLG00000019641	prpf4	84	82.769	Oryzias_latipes
ENSPLAG00000011620	prpf4	97	82.663	ENSORLG00020019438	prpf4	84	82.769	Oryzias_latipes_hni
ENSPLAG00000011620	prpf4	97	83.282	ENSOMEG00000020941	prpf4	86	83.385	Oryzias_melastigma
ENSPLAG00000011620	prpf4	96	66.144	ENSOGAG00000007802	PRPF4	80	65.741	Otolemur_garnettii
ENSPLAG00000011620	prpf4	96	72.050	ENSOARG00000006319	PRPF4	60	71.560	Ovis_aries
ENSPLAG00000011620	prpf4	96	72.360	ENSPPAG00000041797	PRPF4	82	69.969	Pan_paniscus
ENSPLAG00000011620	prpf4	96	72.050	ENSPPRG00000014360	PRPF4	83	71.560	Panthera_pardus
ENSPLAG00000011620	prpf4	96	72.050	ENSPTIG00000009574	PRPF4	83	71.560	Panthera_tigris_altaica
ENSPLAG00000011620	prpf4	96	72.360	ENSPTRG00000021274	PRPF4	84	70.118	Pan_troglodytes
ENSPLAG00000011620	prpf4	96	72.050	ENSPANG00000025776	PRPF4	80	71.125	Papio_anubis
ENSPLAG00000011620	prpf4	99	73.860	ENSPKIG00000017259	prpf4	93	76.000	Paramormyrops_kingsleyae
ENSPLAG00000011620	prpf4	99	68.405	ENSPSIG00000010713	PRPF4	60	68.605	Pelodiscus_sinensis
ENSPLAG00000011620	prpf4	91	59.574	ENSPMGG00000000997	prpf4	62	64.486	Periophthalmus_magnuspinnatus
ENSPLAG00000011620	prpf4	96	72.050	ENSPEMG00000024115	Prpf4	82	69.659	Peromyscus_maniculatus_bairdii
ENSPLAG00000011620	prpf4	97	70.279	ENSPCIG00000003821	PRPF4	83	70.642	Phascolarctos_cinereus
ENSPLAG00000011620	prpf4	97	97.531	ENSPFOG00000013524	prpf4	99	97.546	Poecilia_formosa
ENSPLAG00000011620	prpf4	97	97.214	ENSPMEG00000006813	prpf4	96	97.231	Poecilia_mexicana
ENSPLAG00000011620	prpf4	96	71.739	ENSPCAG00000002561	PRPF4	85	70.149	Procavia_capensis
ENSPLAG00000011620	prpf4	96	71.739	ENSPCOG00000011975	PRPF4	83	71.254	Propithecus_coquereli
ENSPLAG00000011620	prpf4	98	65.089	ENSPVAG00000004708	PRPF4	84	64.897	Pteropus_vampyrus
ENSPLAG00000011620	prpf4	96	89.130	ENSPNYG00000008013	prpf4	84	89.130	Pundamilia_nyererei
ENSPLAG00000011620	prpf4	99	71.037	ENSPNAG00000000697	prpf4	93	73.457	Pygocentrus_nattereri
ENSPLAG00000011620	prpf4	96	72.050	ENSRNOG00000014777	Prpf4	64	70.448	Rattus_norvegicus
ENSPLAG00000011620	prpf4	96	72.050	ENSRBIG00000040221	PRPF4	83	71.560	Rhinopithecus_bieti
ENSPLAG00000011620	prpf4	96	72.050	ENSRROG00000040240	PRPF4	83	71.560	Rhinopithecus_roxellana
ENSPLAG00000011620	prpf4	97	70.279	ENSSHAG00000017658	PRPF4	82	70.642	Sarcophilus_harrisii
ENSPLAG00000011620	prpf4	99	73.860	ENSSFOG00015008963	prpf4	93	76.000	Scleropages_formosus
ENSPLAG00000011620	prpf4	97	85.449	ENSSMAG00000008889	prpf4	84	85.538	Scophthalmus_maximus
ENSPLAG00000011620	prpf4	97	87.616	ENSSDUG00000022083	prpf4	89	87.692	Seriola_dumerili
ENSPLAG00000011620	prpf4	97	87.307	ENSSLDG00000008115	prpf4	89	87.385	Seriola_lalandi_dorsalis
ENSPLAG00000011620	prpf4	99	68.997	ENSSPUG00000015582	PRPF4	82	71.429	Sphenodon_punctatus
ENSPLAG00000011620	prpf4	97	81.646	ENSSPAG00000011286	prpf4	83	81.761	Stegastes_partitus
ENSPLAG00000011620	prpf4	96	72.050	ENSSSCG00000024648	PRPF4	83	71.560	Sus_scrofa
ENSPLAG00000011620	prpf4	94	72.293	ENSTGUG00000002623	PRPF4	84	72.581	Taeniopygia_guttata
ENSPLAG00000011620	prpf4	99	79.635	ENSTRUG00000008853	prpf4	93	82.298	Takifugu_rubripes
ENSPLAG00000011620	prpf4	99	79.331	ENSTNIG00000013250	prpf4	97	81.846	Tetraodon_nigroviridis
ENSPLAG00000011620	prpf4	98	58.876	ENSTBEG00000000821	PRPF4	84	58.876	Tupaia_belangeri
ENSPLAG00000011620	prpf4	81	72.325	ENSTTRG00000003246	PRPF4	60	74.170	Tursiops_truncatus
ENSPLAG00000011620	prpf4	94	70.253	ENSUAMG00000018288	PRPF4	88	70.874	Ursus_americanus
ENSPLAG00000011620	prpf4	96	71.118	ENSUMAG00000019375	PRPF4	82	71.118	Ursus_maritimus
ENSPLAG00000011620	prpf4	96	71.739	ENSVPAG00000005281	PRPF4	84	69.527	Vicugna_pacos
ENSPLAG00000011620	prpf4	96	70.859	ENSVVUG00000002476	PRPF4	85	70.859	Vulpes_vulpes
ENSPLAG00000011620	prpf4	66	84.545	ENSXCOG00000006101	prpf4	57	84.545	Xiphophorus_couchianus
ENSPLAG00000011620	prpf4	97	95.666	ENSXMAG00000002750	prpf4	70	95.692	Xiphophorus_maculatus