EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000011753 (Gene tree)
Gene ID: 106954339
Gene Symbol: rtca
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 9268 bases
Position: chrKQ545962.1:142742-152009
Accession: 106954339
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000009050	RTC	PF01137.21	9.1e-87	1	1
ENSPLAP00000009050	RTC_insert	PF05189.13	1.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000001867	-	1421	XM_015043757	ENSPLAP00000009050	366 (aa)	XP_014899243	UPI00072D99C7

Gene Model

Click here to download ENSPLAG00000011753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011753's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011753	rtca	99	71.585	ENSG00000137996	RTCA	100	71.585	Homo_sapiens
ENSPLAG00000011753	rtca	100	91.530	ENSAPOG00000001345	rtca	100	91.530	Acanthochromis_polyacanthus
ENSPLAG00000011753	rtca	73	73.978	ENSAMEG00000008855	RTCA	100	73.978	Ailuropoda_melanoleuca
ENSPLAG00000011753	rtca	99	91.484	ENSACIG00000019643	rtca	100	91.484	Amphilophus_citrinellus
ENSPLAG00000011753	rtca	100	91.530	ENSAOCG00000014979	rtca	100	91.530	Amphiprion_ocellaris
ENSPLAG00000011753	rtca	100	91.530	ENSAPEG00000006945	rtca	100	91.530	Amphiprion_percula
ENSPLAG00000011753	rtca	95	92.837	ENSATEG00000006315	rtca	96	92.837	Anabas_testudineus
ENSPLAG00000011753	rtca	95	67.705	ENSAPLG00000015430	RTCA	100	67.705	Anas_platyrhynchos
ENSPLAG00000011753	rtca	99	71.585	ENSANAG00000025446	RTCA	100	71.585	Aotus_nancymaae
ENSPLAG00000011753	rtca	100	91.803	ENSACLG00000020770	rtca	100	91.803	Astatotilapia_calliptera
ENSPLAG00000011753	rtca	99	78.846	ENSAMXG00000043271	rtca	100	78.846	Astyanax_mexicanus
ENSPLAG00000011753	rtca	99	72.678	ENSBTAG00000006321	RTCA	100	72.678	Bos_taurus
ENSPLAG00000011753	rtca	99	71.858	ENSCJAG00000003398	RTCA	100	71.858	Callithrix_jacchus
ENSPLAG00000011753	rtca	99	71.585	ENSCAFG00000020010	RTCA	68	71.585	Canis_familiaris
ENSPLAG00000011753	rtca	99	71.585	ENSCAFG00020011528	RTCA	57	71.585	Canis_lupus_dingo
ENSPLAG00000011753	rtca	99	72.404	ENSCHIG00000018937	RTCA	100	72.404	Capra_hircus
ENSPLAG00000011753	rtca	99	72.131	ENSTSYG00000011305	RTCA	100	72.131	Carlito_syrichta
ENSPLAG00000011753	rtca	99	71.311	ENSCCAG00000021844	RTCA	100	71.311	Cebus_capucinus
ENSPLAG00000011753	rtca	99	69.921	ENSCATG00000019364	RTCA	100	72.816	Cercocebus_atys
ENSPLAG00000011753	rtca	86	73.734	ENSCLAG00000006125	RTCA	100	73.734	Chinchilla_lanigera
ENSPLAG00000011753	rtca	99	72.131	ENSCSAG00000001509	RTCA	100	72.131	Chlorocebus_sabaeus
ENSPLAG00000011753	rtca	99	71.038	ENSCHOG00000005211	RTCA	100	71.038	Choloepus_hoffmanni
ENSPLAG00000011753	rtca	99	68.493	ENSCPBG00000026658	RTCA	100	68.493	Chrysemys_picta_bellii
ENSPLAG00000011753	rtca	98	57.103	ENSCING00000007875	-	98	57.103	Ciona_intestinalis
ENSPLAG00000011753	rtca	98	56.546	ENSCSAVG00000007269	-	98	56.546	Ciona_savignyi
ENSPLAG00000011753	rtca	99	71.858	ENSCANG00000040106	RTCA	100	71.858	Colobus_angolensis_palliatus
ENSPLAG00000011753	rtca	73	72.119	ENSCGRG00001013163	Rtca	85	72.119	Cricetulus_griseus_chok1gshd
ENSPLAG00000011753	rtca	98	85.754	ENSCSEG00000000530	rtca	96	85.754	Cynoglossus_semilaevis
ENSPLAG00000011753	rtca	99	74.863	ENSCVAG00000021809	rtca	100	74.863	Cyprinodon_variegatus
ENSPLAG00000011753	rtca	99	78.846	ENSDARG00000002215	rtca	100	78.846	Danio_rerio
ENSPLAG00000011753	rtca	99	72.404	ENSDNOG00000000456	RTCA	100	72.404	Dasypus_novemcinctus
ENSPLAG00000011753	rtca	99	71.858	ENSDORG00000005448	Rtca	100	71.858	Dipodomys_ordii
ENSPLAG00000011753	rtca	97	39.216	FBgn0025630	Rtca	98	39.216	Drosophila_melanogaster
ENSPLAG00000011753	rtca	93	52.339	ENSEBUG00000008556	rtca	94	52.339	Eptatretus_burgeri
ENSPLAG00000011753	rtca	99	72.131	ENSEASG00005015926	RTCA	100	72.131	Equus_asinus_asinus
ENSPLAG00000011753	rtca	99	72.131	ENSECAG00000019831	RTCA	100	72.131	Equus_caballus
ENSPLAG00000011753	rtca	91	64.740	ENSEEUG00000001165	RTCA	100	64.740	Erinaceus_europaeus
ENSPLAG00000011753	rtca	99	77.624	ENSELUG00000003741	rtca	99	77.624	Esox_lucius
ENSPLAG00000011753	rtca	99	72.131	ENSFCAG00000024460	RTCA	100	72.131	Felis_catus
ENSPLAG00000011753	rtca	92	68.343	ENSFALG00000002443	RTCA	91	68.343	Ficedula_albicollis
ENSPLAG00000011753	rtca	98	58.287	ENSFDAG00000016084	-	100	58.287	Fukomys_damarensis
ENSPLAG00000011753	rtca	99	71.311	ENSFDAG00000012070	-	100	71.311	Fukomys_damarensis
ENSPLAG00000011753	rtca	70	75.875	ENSFHEG00000002868	rtca	92	84.186	Fundulus_heteroclitus
ENSPLAG00000011753	rtca	99	79.945	ENSGMOG00000013264	rtca	100	79.945	Gadus_morhua
ENSPLAG00000011753	rtca	99	68.493	ENSGALG00000005277	RTCA	100	68.493	Gallus_gallus
ENSPLAG00000011753	rtca	100	97.814	ENSGAFG00000011853	rtca	100	97.814	Gambusia_affinis
ENSPLAG00000011753	rtca	99	86.813	ENSGACG00000013497	rtca	100	86.813	Gasterosteus_aculeatus
ENSPLAG00000011753	rtca	80	67.918	ENSGAGG00000023306	RTCA	100	67.918	Gopherus_agassizii
ENSPLAG00000011753	rtca	99	71.038	ENSGGOG00000044018	-	100	71.038	Gorilla_gorilla
ENSPLAG00000011753	rtca	99	71.585	ENSGGOG00000009546	-	100	71.845	Gorilla_gorilla
ENSPLAG00000011753	rtca	100	91.530	ENSHBUG00000002114	rtca	100	91.530	Haplochromis_burtoni
ENSPLAG00000011753	rtca	99	71.858	ENSHGLG00000002617	RTCA	100	71.858	Heterocephalus_glaber_female
ENSPLAG00000011753	rtca	99	71.858	ENSHGLG00100006056	RTCA	100	71.858	Heterocephalus_glaber_male
ENSPLAG00000011753	rtca	99	76.164	ENSHCOG00000020628	rtca	90	76.164	Hippocampus_comes
ENSPLAG00000011753	rtca	99	77.473	ENSIPUG00000024803	rtca	100	77.473	Ictalurus_punctatus
ENSPLAG00000011753	rtca	99	63.661	ENSSTOG00000033099	-	100	63.661	Ictidomys_tridecemlineatus
ENSPLAG00000011753	rtca	99	66.940	ENSSTOG00000013528	-	100	66.940	Ictidomys_tridecemlineatus
ENSPLAG00000011753	rtca	99	52.329	ENSJJAG00000016178	Rtca	100	52.329	Jaculus_jaculus
ENSPLAG00000011753	rtca	100	90.984	ENSKMAG00000006651	rtca	100	90.984	Kryptolebias_marmoratus
ENSPLAG00000011753	rtca	99	87.363	ENSLBEG00000028971	rtca	100	87.363	Labrus_bergylta
ENSPLAG00000011753	rtca	87	86.207	ENSLBEG00000002448	-	99	86.207	Labrus_bergylta
ENSPLAG00000011753	rtca	99	67.671	ENSLACG00000013666	RTCA	100	67.671	Latimeria_chalumnae
ENSPLAG00000011753	rtca	99	74.521	ENSLOCG00000000093	rtca	99	74.521	Lepisosteus_oculatus
ENSPLAG00000011753	rtca	99	71.311	ENSLAFG00000001473	RTCA	100	71.311	Loxodonta_africana
ENSPLAG00000011753	rtca	99	72.131	ENSMFAG00000034132	RTCA	100	72.131	Macaca_fascicularis
ENSPLAG00000011753	rtca	99	72.131	ENSMMUG00000019105	RTCA	100	72.131	Macaca_mulatta
ENSPLAG00000011753	rtca	84	72.492	ENSMNEG00000037163	RTCA	100	72.492	Macaca_nemestrina
ENSPLAG00000011753	rtca	99	59.563	ENSMLEG00000042151	RTCA	100	59.563	Mandrillus_leucophaeus
ENSPLAG00000011753	rtca	99	92.308	ENSMAMG00000016536	rtca	100	92.308	Mastacembelus_armatus
ENSPLAG00000011753	rtca	100	91.803	ENSMZEG00005017945	rtca	100	91.803	Maylandia_zebra
ENSPLAG00000011753	rtca	87	68.553	ENSMGAG00000006892	RTCA	99	68.553	Meleagris_gallopavo
ENSPLAG00000011753	rtca	99	71.585	ENSMAUG00000008488	Rtca	100	71.585	Mesocricetus_auratus
ENSPLAG00000011753	rtca	84	73.463	ENSMICG00000008643	RTCA	100	73.463	Microcebus_murinus
ENSPLAG00000011753	rtca	99	70.492	ENSMOCG00000016660	Rtca	100	70.492	Microtus_ochrogaster
ENSPLAG00000011753	rtca	84	89.902	ENSMMOG00000007750	rtca	100	89.902	Mola_mola
ENSPLAG00000011753	rtca	99	72.131	ENSMODG00000003557	RTCA	100	72.131	Monodelphis_domestica
ENSPLAG00000011753	rtca	99	91.758	ENSMALG00000020844	rtca	100	91.758	Monopterus_albus
ENSPLAG00000011753	rtca	99	70.219	MGP_CAROLIEiJ_G0025565	Rtca	100	70.219	Mus_caroli
ENSPLAG00000011753	rtca	99	69.945	ENSMUSG00000000339	Rtca	100	69.945	Mus_musculus
ENSPLAG00000011753	rtca	99	70.219	MGP_PahariEiJ_G0027011	Rtca	100	70.219	Mus_pahari
ENSPLAG00000011753	rtca	99	70.219	MGP_SPRETEiJ_G0026515	Rtca	100	70.219	Mus_spretus
ENSPLAG00000011753	rtca	99	72.131	ENSMPUG00000012119	RTCA	100	72.131	Mustela_putorius_furo
ENSPLAG00000011753	rtca	99	68.120	ENSMLUG00000009922	RTCA	100	68.120	Myotis_lucifugus
ENSPLAG00000011753	rtca	99	71.038	ENSNGAG00000011540	Rtca	99	71.038	Nannospalax_galili
ENSPLAG00000011753	rtca	100	92.077	ENSNBRG00000003062	rtca	100	92.077	Neolamprologus_brichardi
ENSPLAG00000011753	rtca	99	71.858	ENSNLEG00000031426	RTCA	100	71.858	Nomascus_leucogenys
ENSPLAG00000011753	rtca	73	69.888	ENSOPRG00000012092	RTCA	71	69.888	Ochotona_princeps
ENSPLAG00000011753	rtca	95	72.414	ENSODEG00000006990	RTCA	96	72.650	Octodon_degus
ENSPLAG00000011753	rtca	100	92.350	ENSONIG00000007753	rtca	100	92.350	Oreochromis_niloticus
ENSPLAG00000011753	rtca	86	72.871	ENSOANG00000012055	RTCA	98	72.871	Ornithorhynchus_anatinus
ENSPLAG00000011753	rtca	99	72.131	ENSOCUG00000014247	RTCA	100	72.131	Oryctolagus_cuniculus
ENSPLAG00000011753	rtca	99	90.110	ENSORLG00000013605	rtca	100	90.110	Oryzias_latipes
ENSPLAG00000011753	rtca	99	90.385	ENSORLG00020001904	rtca	100	90.385	Oryzias_latipes_hni
ENSPLAG00000011753	rtca	99	90.110	ENSORLG00015021064	rtca	100	90.110	Oryzias_latipes_hsok
ENSPLAG00000011753	rtca	99	90.659	ENSOMEG00000000756	rtca	100	90.659	Oryzias_melastigma
ENSPLAG00000011753	rtca	99	66.667	ENSOGAG00000005627	RTCA	100	66.667	Otolemur_garnettii
ENSPLAG00000011753	rtca	86	72.956	ENSOARG00000018122	RTCA	100	72.956	Ovis_aries
ENSPLAG00000011753	rtca	99	68.865	ENSPPAG00000035119	RTCA	100	71.521	Pan_paniscus
ENSPLAG00000011753	rtca	99	72.131	ENSPPRG00000000350	RTCA	100	72.131	Panthera_pardus
ENSPLAG00000011753	rtca	99	71.858	ENSPTIG00000012816	RTCA	100	71.858	Panthera_tigris_altaica
ENSPLAG00000011753	rtca	99	68.865	ENSPTRG00000001004	RTCA	100	71.521	Pan_troglodytes
ENSPLAG00000011753	rtca	99	72.131	ENSPANG00000000346	RTCA	100	72.131	Papio_anubis
ENSPLAG00000011753	rtca	99	80.220	ENSPKIG00000001653	rtca	100	80.220	Paramormyrops_kingsleyae
ENSPLAG00000011753	rtca	99	68.219	ENSPSIG00000011408	RTCA	100	68.219	Pelodiscus_sinensis
ENSPLAG00000011753	rtca	99	70.765	ENSPEMG00000018582	Rtca	100	70.765	Peromyscus_maniculatus_bairdii
ENSPLAG00000011753	rtca	98	55.402	ENSPMAG00000009110	rtca	98	55.402	Petromyzon_marinus
ENSPLAG00000011753	rtca	99	71.858	ENSPCIG00000007684	RTCA	100	71.858	Phascolarctos_cinereus
ENSPLAG00000011753	rtca	99	99.452	ENSPFOG00000004824	rtca	100	99.452	Poecilia_formosa
ENSPLAG00000011753	rtca	100	100.000	ENSPMEG00000020469	rtca	100	100.000	Poecilia_mexicana
ENSPLAG00000011753	rtca	100	98.361	ENSPREG00000001365	rtca	100	98.361	Poecilia_reticulata
ENSPLAG00000011753	rtca	99	72.131	ENSPPYG00000001115	RTCA	100	72.131	Pongo_abelii
ENSPLAG00000011753	rtca	99	69.126	ENSPCAG00000005076	RTCA	100	69.126	Procavia_capensis
ENSPLAG00000011753	rtca	99	72.678	ENSPCOG00000005603	RTCA	100	72.678	Propithecus_coquereli
ENSPLAG00000011753	rtca	99	67.810	ENSPVAG00000009478	RTCA	100	67.810	Pteropus_vampyrus
ENSPLAG00000011753	rtca	100	91.803	ENSPNYG00000004722	rtca	100	91.803	Pundamilia_nyererei
ENSPLAG00000011753	rtca	99	78.571	ENSPNAG00000022270	rtca	100	78.571	Pygocentrus_nattereri
ENSPLAG00000011753	rtca	99	70.219	ENSRNOG00000014575	Rtca	100	70.219	Rattus_norvegicus
ENSPLAG00000011753	rtca	99	69.129	ENSRBIG00000041180	RTCA	100	71.845	Rhinopithecus_bieti
ENSPLAG00000011753	rtca	99	71.585	ENSRROG00000024929	RTCA	100	71.585	Rhinopithecus_roxellana
ENSPLAG00000011753	rtca	99	71.038	ENSSBOG00000028626	RTCA	100	71.038	Saimiri_boliviensis_boliviensis
ENSPLAG00000011753	rtca	99	71.858	ENSSHAG00000001758	RTCA	100	71.858	Sarcophilus_harrisii
ENSPLAG00000011753	rtca	100	84.865	ENSSMAG00000014680	rtca	100	84.865	Scophthalmus_maximus
ENSPLAG00000011753	rtca	98	91.899	ENSSDUG00000015585	rtca	98	91.160	Seriola_dumerili
ENSPLAG00000011753	rtca	95	91.977	ENSSLDG00000018985	rtca	95	91.977	Seriola_lalandi_dorsalis
ENSPLAG00000011753	rtca	86	67.823	ENSSARG00000013993	RTCA	100	67.823	Sorex_araneus
ENSPLAG00000011753	rtca	100	91.803	ENSSPAG00000011938	rtca	100	91.803	Stegastes_partitus
ENSPLAG00000011753	rtca	99	72.404	ENSSSCG00000006865	RTCA	100	72.404	Sus_scrofa
ENSPLAG00000011753	rtca	99	69.315	ENSTGUG00000005154	RTCA	100	69.315	Taeniopygia_guttata
ENSPLAG00000011753	rtca	99	89.286	ENSTRUG00000008799	rtca	100	89.286	Takifugu_rubripes
ENSPLAG00000011753	rtca	99	87.363	ENSTNIG00000004725	rtca	100	87.363	Tetraodon_nigroviridis
ENSPLAG00000011753	rtca	57	57.143	ENSTBEG00000000943	RTCA	59	57.143	Tupaia_belangeri
ENSPLAG00000011753	rtca	99	69.921	ENSTTRG00000015327	RTCA	100	69.921	Tursiops_truncatus
ENSPLAG00000011753	rtca	95	70.317	ENSUAMG00000017265	RTCA	97	70.317	Ursus_americanus
ENSPLAG00000011753	rtca	99	71.585	ENSUMAG00000007881	RTCA	100	71.585	Ursus_maritimus
ENSPLAG00000011753	rtca	86	64.669	ENSVPAG00000001039	RTCA	84	64.669	Vicugna_pacos
ENSPLAG00000011753	rtca	99	71.585	ENSVVUG00000022041	RTCA	68	71.585	Vulpes_vulpes
ENSPLAG00000011753	rtca	99	57.493	ENSXETG00000031661	RTCA	99	57.493	Xenopus_tropicalis
ENSPLAG00000011753	rtca	99	86.264	ENSXCOG00000008002	rtca	100	86.264	Xiphophorus_couchianus
ENSPLAG00000011753	rtca	100	97.814	ENSXMAG00000005482	rtca	100	97.814	Xiphophorus_maculatus