EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000011810 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 5356 bases
Position: chrKQ547947.1:72200-77555
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000025087	RVT_1	PF00078.27	1.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000001745	-	3183	-	ENSPLAP00000025087	1060 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000011810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000011810	-	76	84.938	ENSPLAG00000023379	-	97	84.938
ENSPLAG00000011810	-	98	100.000	ENSPLAG00000022994	-	98	100.000
ENSPLAG00000011810	-	92	67.416	ENSPLAG00000011817	-	98	67.518

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011810	-	80	41.812	ENSACIG00000009025	-	97	41.812	Amphilophus_citrinellus
ENSPLAG00000011810	-	87	41.151	ENSACIG00000010787	-	92	41.151	Amphilophus_citrinellus
ENSPLAG00000011810	-	96	39.773	ENSACIG00000007038	-	91	40.076	Amphilophus_citrinellus
ENSPLAG00000011810	-	84	41.538	ENSACIG00000013116	-	88	41.538	Amphilophus_citrinellus
ENSPLAG00000011810	-	97	36.973	ENSACIG00000012161	-	92	36.973	Amphilophus_citrinellus
ENSPLAG00000011810	-	84	40.327	ENSAMXG00000042811	-	77	40.327	Astyanax_mexicanus
ENSPLAG00000011810	-	83	38.311	ENSCPBG00000003842	-	68	38.311	Chrysemys_picta_bellii
ENSPLAG00000011810	-	94	39.523	ENSCVAG00000004138	-	96	39.523	Cyprinodon_variegatus
ENSPLAG00000011810	-	74	37.953	ENSELUG00000004597	-	82	37.688	Esox_lucius
ENSPLAG00000011810	-	84	33.444	ENSELUG00000004618	-	84	33.770	Esox_lucius
ENSPLAG00000011810	-	96	38.027	ENSFHEG00000002865	-	90	38.027	Fundulus_heteroclitus
ENSPLAG00000011810	-	94	40.215	ENSFHEG00000022106	-	94	40.353	Fundulus_heteroclitus
ENSPLAG00000011810	-	93	40.845	ENSFHEG00000002853	-	89	40.845	Fundulus_heteroclitus
ENSPLAG00000011810	-	89	41.018	ENSFHEG00000007211	-	95	40.100	Fundulus_heteroclitus
ENSPLAG00000011810	-	55	41.908	ENSGMOG00000005227	-	99	41.908	Gadus_morhua
ENSPLAG00000011810	-	94	35.225	ENSHCOG00000007389	-	93	35.225	Hippocampus_comes
ENSPLAG00000011810	-	77	37.424	ENSHCOG00000000471	-	69	37.424	Hippocampus_comes
ENSPLAG00000011810	-	66	43.836	ENSHCOG00000007436	-	65	43.836	Hippocampus_comes
ENSPLAG00000011810	-	93	36.023	ENSHCOG00000007397	-	91	36.023	Hippocampus_comes
ENSPLAG00000011810	-	66	40.189	ENSLBEG00000006732	-	82	40.189	Labrus_bergylta
ENSPLAG00000011810	-	74	39.015	ENSLBEG00000003745	-	89	39.015	Labrus_bergylta
ENSPLAG00000011810	-	66	40.898	ENSLBEG00000004576	-	82	40.898	Labrus_bergylta
ENSPLAG00000011810	-	73	34.474	ENSLACG00000006357	-	98	34.474	Latimeria_chalumnae
ENSPLAG00000011810	-	53	33.511	ENSLACG00000009240	-	96	33.511	Latimeria_chalumnae
ENSPLAG00000011810	-	78	37.945	ENSLOCG00000011928	-	80	37.945	Lepisosteus_oculatus
ENSPLAG00000011810	-	94	32.149	ENSLOCG00000017064	-	97	32.149	Lepisosteus_oculatus
ENSPLAG00000011810	-	50	38.752	ENSLOCG00000002743	-	100	38.752	Lepisosteus_oculatus
ENSPLAG00000011810	-	92	38.266	ENSMAMG00000019985	-	89	38.266	Mastacembelus_armatus
ENSPLAG00000011810	-	96	40.962	ENSONIG00000020875	-	90	40.962	Oreochromis_niloticus
ENSPLAG00000011810	-	94	35.389	ENSOMEG00000015368	-	98	35.687	Oryzias_melastigma
ENSPLAG00000011810	-	86	39.935	ENSPMGG00000017392	-	97	39.935	Periophthalmus_magnuspinnatus
ENSPLAG00000011810	-	82	40.717	ENSPMGG00000001593	-	91	40.717	Periophthalmus_magnuspinnatus
ENSPLAG00000011810	-	96	68.102	ENSPMEG00000003431	-	98	68.297	Poecilia_mexicana
ENSPLAG00000011810	-	98	79.460	ENSPMEG00000008574	-	98	79.460	Poecilia_mexicana
ENSPLAG00000011810	-	95	48.400	ENSPREG00000005456	-	88	48.400	Poecilia_reticulata
ENSPLAG00000011810	-	96	68.756	ENSPREG00000012484	-	91	68.756	Poecilia_reticulata
ENSPLAG00000011810	-	97	49.377	ENSPREG00000005756	-	95	49.377	Poecilia_reticulata
ENSPLAG00000011810	-	74	42.308	ENSPNAG00000007038	-	70	41.667	Pygocentrus_nattereri
ENSPLAG00000011810	-	60	40.487	ENSPNAG00000017596	-	68	40.487	Pygocentrus_nattereri
ENSPLAG00000011810	-	74	40.870	ENSPNAG00000016635	-	67	40.870	Pygocentrus_nattereri
ENSPLAG00000011810	-	65	38.434	ENSPNAG00000014625	-	64	38.710	Pygocentrus_nattereri
ENSPLAG00000011810	-	73	41.814	ENSPNAG00000021754	-	67	41.814	Pygocentrus_nattereri
ENSPLAG00000011810	-	74	40.870	ENSPNAG00000003539	-	66	40.870	Pygocentrus_nattereri
ENSPLAG00000011810	-	77	72.660	ENSXCOG00000008881	-	92	72.660	Xiphophorus_couchianus
ENSPLAG00000011810	-	94	37.335	ENSXCOG00000013093	-	92	37.335	Xiphophorus_couchianus
ENSPLAG00000011810	-	95	66.567	ENSXMAG00000028672	-	91	66.567	Xiphophorus_maculatus