EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000011817 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3003 bases
Position: chrKQ547947.1:21918-24920
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000009134	RVT_1	PF00078.27	8.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000001731	-	2901	-	ENSPLAP00000009134	966 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000011817's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011817's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000011817	-	99	67.608	ENSPLAG00000022994	-	94	67.508
ENSPLAG00000011817	-	83	70.000	ENSPLAG00000023379	-	100	70.000
ENSPLAG00000011817	-	98	67.518	ENSPLAG00000011810	-	92	67.416

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011817	-	99	37.914	ENSACIG00000007038	-	90	38.146	Amphilophus_citrinellus
ENSPLAG00000011817	-	99	35.936	ENSACIG00000010787	-	93	35.936	Amphilophus_citrinellus
ENSPLAG00000011817	-	85	39.954	ENSACIG00000013116	-	85	39.723	Amphilophus_citrinellus
ENSPLAG00000011817	-	85	40.116	ENSACIG00000009025	-	97	39.884	Amphilophus_citrinellus
ENSPLAG00000011817	-	99	35.410	ENSACIG00000012161	-	89	35.474	Amphilophus_citrinellus
ENSPLAG00000011817	-	80	36.914	ENSAMXG00000042811	-	69	36.790	Astyanax_mexicanus
ENSPLAG00000011817	-	91	36.737	ENSCPBG00000003842	-	70	36.737	Chrysemys_picta_bellii
ENSPLAG00000011817	-	99	38.300	ENSCVAG00000004138	-	96	38.300	Cyprinodon_variegatus
ENSPLAG00000011817	-	80	35.523	ENSELUG00000004597	-	84	35.388	Esox_lucius
ENSPLAG00000011817	-	90	37.987	ENSFHEG00000007211	-	92	37.435	Fundulus_heteroclitus
ENSPLAG00000011817	-	99	37.082	ENSFHEG00000002853	-	90	36.943	Fundulus_heteroclitus
ENSPLAG00000011817	-	99	38.591	ENSFHEG00000022106	-	94	38.492	Fundulus_heteroclitus
ENSPLAG00000011817	-	98	37.832	ENSFHEG00000002865	-	87	37.832	Fundulus_heteroclitus
ENSPLAG00000011817	-	57	38.330	ENSGMOG00000005227	-	99	38.265	Gadus_morhua
ENSPLAG00000011817	-	79	47.761	ENSHCOG00000007436	-	75	47.761	Hippocampus_comes
ENSPLAG00000011817	-	87	36.712	ENSHCOG00000000471	-	73	38.028	Hippocampus_comes
ENSPLAG00000011817	-	99	34.154	ENSHCOG00000007389	-	93	34.055	Hippocampus_comes
ENSPLAG00000011817	-	99	33.960	ENSHCOG00000007397	-	92	33.866	Hippocampus_comes
ENSPLAG00000011817	-	78	36.644	ENSLBEG00000004576	-	93	38.800	Labrus_bergylta
ENSPLAG00000011817	-	78	38.314	ENSLBEG00000003745	-	91	37.531	Labrus_bergylta
ENSPLAG00000011817	-	78	36.644	ENSLBEG00000006732	-	92	38.800	Labrus_bergylta
ENSPLAG00000011817	-	58	33.156	ENSLACG00000009240	-	99	32.979	Latimeria_chalumnae
ENSPLAG00000011817	-	75	33.156	ENSLACG00000006357	-	95	33.156	Latimeria_chalumnae
ENSPLAG00000011817	-	51	38.241	ENSLOCG00000002743	-	100	38.241	Lepisosteus_oculatus
ENSPLAG00000011817	-	99	31.676	ENSLOCG00000017064	-	97	31.676	Lepisosteus_oculatus
ENSPLAG00000011817	-	91	34.352	ENSLOCG00000011928	-	84	34.352	Lepisosteus_oculatus
ENSPLAG00000011817	-	96	39.792	ENSMAMG00000019985	-	82	39.376	Mastacembelus_armatus
ENSPLAG00000011817	-	99	37.891	ENSONIG00000020875	-	88	37.854	Oreochromis_niloticus
ENSPLAG00000011817	-	99	35.421	ENSOMEG00000015368	-	98	35.093	Oryzias_melastigma
ENSPLAG00000011817	-	93	36.585	ENSPMGG00000017392	-	99	36.479	Periophthalmus_magnuspinnatus
ENSPLAG00000011817	-	84	37.664	ENSPMGG00000001593	-	88	37.829	Periophthalmus_magnuspinnatus
ENSPLAG00000011817	-	100	66.293	ENSPMEG00000008574	-	94	66.293	Poecilia_mexicana
ENSPLAG00000011817	-	100	92.922	ENSPMEG00000003431	-	96	92.518	Poecilia_mexicana
ENSPLAG00000011817	-	99	46.443	ENSPREG00000005756	-	92	46.443	Poecilia_reticulata
ENSPLAG00000011817	-	99	46.521	ENSPREG00000005456	-	87	46.521	Poecilia_reticulata
ENSPLAG00000011817	-	99	66.500	ENSPREG00000012484	-	89	66.500	Poecilia_reticulata
ENSPLAG00000011817	-	80	38.443	ENSPNAG00000016635	-	68	38.200	Pygocentrus_nattereri
ENSPLAG00000011817	-	80	38.714	ENSPNAG00000007038	-	70	38.526	Pygocentrus_nattereri
ENSPLAG00000011817	-	79	37.164	ENSPNAG00000003539	-	67	37.010	Pygocentrus_nattereri
ENSPLAG00000011817	-	82	33.604	ENSPNAG00000017596	-	86	33.372	Pygocentrus_nattereri
ENSPLAG00000011817	-	79	37.500	ENSPNAG00000021754	-	70	37.470	Pygocentrus_nattereri
ENSPLAG00000011817	-	99	35.029	ENSXCOG00000013093	-	91	35.029	Xiphophorus_couchianus
ENSPLAG00000011817	-	82	82.388	ENSXCOG00000008881	-	94	82.027	Xiphophorus_couchianus
ENSPLAG00000011817	-	99	75.150	ENSXMAG00000028672	-	90	74.850	Xiphophorus_maculatus