EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000011958 (Gene tree)
Gene ID: 106949703
Gene Symbol: -
Alias: -
Full Name: zinc finger and BTB domain-containing protein 17-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4516 bases
Position: chrKQ545673.1:59308-63823
Accession: 106949703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000009260	zf-C2H2	PF00096.26	4.3e-21	1	3
ENSPLAP00000009260	zf-C2H2	PF00096.26	4.3e-21	2	3
ENSPLAP00000009260	zf-C2H2	PF00096.26	4.3e-21	3	3
ENSPLAP00000009260	zf-met	PF12874.7	6.8e-08	1	2
ENSPLAP00000009260	zf-met	PF12874.7	6.8e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000001525	-	2710	XM_015036138	ENSPLAP00000009260	409 (aa)	XP_014891624	UPI00072DB5A0

Gene Model

Click here to download ENSPLAG00000011958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000011958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000011958	-	56	43.478	ENSPLAG00000006254	-	95	42.857
ENSPLAG00000011958	-	64	42.735	ENSPLAG00000004503	-	88	47.458
ENSPLAG00000011958	-	62	43.478	ENSPLAG00000022610	-	80	43.478
ENSPLAG00000011958	-	63	50.000	ENSPLAG00000016591	-	64	50.000
ENSPLAG00000011958	-	51	46.903	ENSPLAG00000010230	-	81	46.903
ENSPLAG00000011958	-	51	46.018	ENSPLAG00000021062	-	96	46.018
ENSPLAG00000011958	-	67	46.957	ENSPLAG00000016384	-	84	46.957
ENSPLAG00000011958	-	63	47.788	ENSPLAG00000016561	zgc:113348	91	47.788
ENSPLAG00000011958	-	65	41.441	ENSPLAG00000009662	-	87	41.441
ENSPLAG00000011958	-	58	46.087	ENSPLAG00000005090	-	95	42.667
ENSPLAG00000011958	-	69	44.248	ENSPLAG00000002892	-	70	44.248
ENSPLAG00000011958	-	64	42.857	ENSPLAG00000009651	-	81	42.857
ENSPLAG00000011958	-	65	39.286	ENSPLAG00000009568	-	93	47.500
ENSPLAG00000011958	-	67	44.578	ENSPLAG00000010558	-	67	44.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000011958	-	99	55.583	ENSAPOG00000022184	-	99	54.458	Acanthochromis_polyacanthus
ENSPLAG00000011958	-	99	46.087	ENSAPOG00000023008	-	61	46.087	Acanthochromis_polyacanthus
ENSPLAG00000011958	-	99	50.000	ENSACIG00000022738	-	87	51.304	Amphilophus_citrinellus
ENSPLAG00000011958	-	55	46.552	ENSAOCG00000016409	-	69	46.552	Amphiprion_ocellaris
ENSPLAG00000011958	-	99	54.854	ENSAOCG00000022836	-	99	53.883	Amphiprion_ocellaris
ENSPLAG00000011958	-	99	46.552	ENSAPEG00000008746	-	69	46.552	Amphiprion_percula
ENSPLAG00000011958	-	99	54.612	ENSAPEG00000003776	-	99	53.641	Amphiprion_percula
ENSPLAG00000011958	-	99	50.433	ENSATEG00000014684	-	94	80.702	Anabas_testudineus
ENSPLAG00000011958	-	99	92.611	ENSGAFG00000018506	-	99	92.365	Gambusia_affinis
ENSPLAG00000011958	-	72	42.857	ENSHBUG00000017924	-	59	42.857	Haplochromis_burtoni
ENSPLAG00000011958	-	99	62.763	ENSKMAG00000000427	-	97	62.937	Kryptolebias_marmoratus
ENSPLAG00000011958	-	99	45.217	ENSKMAG00000015304	-	72	45.217	Kryptolebias_marmoratus
ENSPLAG00000011958	-	98	52.183	ENSLBEG00000026060	-	99	52.183	Labrus_bergylta
ENSPLAG00000011958	-	56	50.719	ENSLBEG00000009663	-	89	50.719	Labrus_bergylta
ENSPLAG00000011958	-	58	46.753	ENSMMOG00000005437	-	81	46.753	Mola_mola
ENSPLAG00000011958	-	55	47.826	ENSMMOG00000009252	-	72	47.826	Mola_mola
ENSPLAG00000011958	-	99	45.217	ENSMALG00000011756	-	68	45.217	Monopterus_albus
ENSPLAG00000011958	-	100	98.540	ENSPMEG00000006760	-	100	98.540	Poecilia_mexicana
ENSPLAG00000011958	-	99	95.146	ENSPREG00000021124	-	99	94.903	Poecilia_reticulata
ENSPLAG00000011958	-	69	42.857	ENSPNYG00000016157	-	59	42.857	Pundamilia_nyererei
ENSPLAG00000011958	-	99	47.788	ENSPNAG00000011660	-	56	47.788	Pygocentrus_nattereri
ENSPLAG00000011958	-	55	50.000	ENSSPAG00000007403	-	94	46.491	Stegastes_partitus
ENSPLAG00000011958	-	72	54.341	ENSSPAG00000008950	-	52	84.375	Stegastes_partitus
ENSPLAG00000011958	-	50	41.379	ENSTRUG00000024009	-	68	41.379	Takifugu_rubripes
ENSPLAG00000011958	-	50	89.706	ENSXMAG00000022894	-	74	89.706	Xiphophorus_maculatus