EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000012223 (Gene tree)
Gene ID: 106940938
Gene Symbol: sar1b
Alias: -
Full Name: GTP-binding protein SAR1b
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 11432 bases
Position: chrLMXD01035295.1:31427-42858
Accession: 106940938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000025310	MMR_HSR1	PF01926.23	2.5e-05	1	1
ENSPLAP00000009449	MMR_HSR1	PF01926.23	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000001181	-	2993	XM_015023834	ENSPLAP00000025310	198 (aa)	XP_014879320	UPI00072DF01D
ENSPLAT00000001199	-	420	-	ENSPLAP00000009449	139 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000012223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000012223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000012223	sar1b	75	34.615	ENSPLAG00000020941	-	78	31.469
ENSPLAG00000012223	sar1b	87	30.814	ENSPLAG00000006742	arf5	89	30.814
ENSPLAG00000012223	sar1b	100	81.313	ENSPLAG00000023705	sar1ab	100	81.313
ENSPLAG00000012223	sar1b	71	36.275	ENSPLAG00000000596	-	57	36.275
ENSPLAG00000012223	sar1b	83	32.174	ENSPLAG00000015887	-	60	32.174
ENSPLAG00000012223	sar1b	89	32.222	ENSPLAG00000012234	-	85	32.222
ENSPLAG00000012223	sar1b	76	31.126	ENSPLAG00000020975	arl8ba	76	31.126
ENSPLAG00000012223	sar1b	94	30.526	ENSPLAG00000008306	ARL6	96	30.526
ENSPLAG00000012223	sar1b	71	31.313	ENSPLAG00000002394	arl5c	56	31.313
ENSPLAG00000012223	sar1b	61	33.721	ENSPLAG00000000576	arl11	54	33.721
ENSPLAG00000012223	sar1b	69	30.189	ENSPLAG00000022207	arfrp1	52	30.189
ENSPLAG00000012223	sar1b	75	34.615	ENSPLAG00000015550	arf3b	78	31.469
ENSPLAG00000012223	sar1b	76	30.464	ENSPLAG00000004167	arl8a	76	30.464
ENSPLAG00000012223	sar1b	64	31.461	ENSPLAG00000001962	arl3	50	31.461
ENSPLAG00000012223	sar1b	64	35.955	ENSPLAG00000021807	arl8	50	35.955
ENSPLAG00000012223	sar1b	72	33.333	ENSPLAG00000017420	arl4aa	72	33.333
ENSPLAG00000012223	sar1b	86	31.818	ENSPLAG00000019168	arl4d	82	31.818
ENSPLAG00000012223	sar1b	73	38.095	ENSPLAG00000007217	-	86	38.760
ENSPLAG00000012223	sar1b	76	31.126	ENSPLAG00000007941	-	76	31.126
ENSPLAG00000012223	sar1b	94	30.319	ENSPLAG00000008384	arl3l2	94	30.319
ENSPLAG00000012223	sar1b	87	30.058	ENSPLAG00000015630	-	89	30.058
ENSPLAG00000012223	sar1b	78	33.945	ENSPLAG00000020696	arf2b	60	33.945
ENSPLAG00000012223	sar1b	92	30.978	ENSPLAG00000012898	arl1	94	30.978
ENSPLAG00000012223	sar1b	76	33.945	ENSPLAG00000017362	arl14	63	33.945
ENSPLAG00000012223	sar1b	71	37.374	ENSPLAG00000001041	-	55	37.374
ENSPLAG00000012223	sar1b	76	35.135	ENSPLAG00000007735	arl4cb	75	30.667
ENSPLAG00000012223	sar1b	88	31.967	ENSPLAG00000012381	arl2	65	31.967
ENSPLAG00000012223	sar1b	85	86.441	ENSPLAG00000001016	-	85	80.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000012223	sar1b	100	93.939	ENSAPOG00000007186	sar1b	100	93.939	Acanthochromis_polyacanthus
ENSPLAG00000012223	sar1b	100	84.848	ENSAPOG00000017891	-	100	84.848	Acanthochromis_polyacanthus
ENSPLAG00000012223	sar1b	100	83.333	ENSACIG00000024513	-	100	83.333	Amphilophus_citrinellus
ENSPLAG00000012223	sar1b	100	92.929	ENSACIG00000013634	sar1b	100	92.929	Amphilophus_citrinellus
ENSPLAG00000012223	sar1b	100	93.434	ENSAOCG00000005888	sar1b	100	93.434	Amphiprion_ocellaris
ENSPLAG00000012223	sar1b	100	84.848	ENSAOCG00000002627	-	100	84.848	Amphiprion_ocellaris
ENSPLAG00000012223	sar1b	100	84.848	ENSAPEG00000019680	-	100	84.848	Amphiprion_percula
ENSPLAG00000012223	sar1b	100	93.434	ENSAPEG00000022771	sar1b	100	93.434	Amphiprion_percula
ENSPLAG00000012223	sar1b	100	83.333	ENSATEG00000023368	-	100	83.333	Anabas_testudineus
ENSPLAG00000012223	sar1b	100	92.424	ENSATEG00000012904	sar1b	100	92.424	Anabas_testudineus
ENSPLAG00000012223	sar1b	100	89.899	ENSACAG00000001470	-	100	89.899	Anolis_carolinensis
ENSPLAG00000012223	sar1b	100	84.343	ENSACLG00000005011	-	100	84.343	Astatotilapia_calliptera
ENSPLAG00000012223	sar1b	100	93.939	ENSACLG00000014649	sar1b	100	93.939	Astatotilapia_calliptera
ENSPLAG00000012223	sar1b	85	91.525	ENSAMXG00000018108	sar1b	85	91.525	Astyanax_mexicanus
ENSPLAG00000012223	sar1b	100	85.354	ENSAMXG00000034192	-	91	85.354	Astyanax_mexicanus
ENSPLAG00000012223	sar1b	100	83.838	ENSCSEG00000016976	-	100	83.838	Cynoglossus_semilaevis
ENSPLAG00000012223	sar1b	100	85.859	ENSCSEG00000015238	sar1b	97	85.859	Cynoglossus_semilaevis
ENSPLAG00000012223	sar1b	100	95.455	ENSCVAG00000022959	sar1b	100	95.455	Cyprinodon_variegatus
ENSPLAG00000012223	sar1b	100	92.929	ENSDARG00000103403	sar1b	100	92.929	Danio_rerio
ENSPLAG00000012223	sar1b	99	70.408	FBgn0038947	Sar1	99	70.408	Drosophila_melanogaster
ENSPLAG00000012223	sar1b	97	88.021	ENSEBUG00000011723	sar1b	97	88.021	Eptatretus_burgeri
ENSPLAG00000012223	sar1b	100	93.939	ENSELUG00000020912	sar1b	100	93.939	Esox_lucius
ENSPLAG00000012223	sar1b	100	94.949	ENSFHEG00000019865	sar1b	100	94.949	Fundulus_heteroclitus
ENSPLAG00000012223	sar1b	100	93.939	ENSGMOG00000008023	sar1b	100	93.939	Gadus_morhua
ENSPLAG00000012223	sar1b	100	98.485	ENSGAFG00000007081	sar1b	100	98.485	Gambusia_affinis
ENSPLAG00000012223	sar1b	100	91.414	ENSGACG00000001474	sar1b	100	91.414	Gasterosteus_aculeatus
ENSPLAG00000012223	sar1b	100	84.343	ENSHBUG00000018397	-	100	84.343	Haplochromis_burtoni
ENSPLAG00000012223	sar1b	100	93.939	ENSHBUG00000000915	sar1b	100	93.939	Haplochromis_burtoni
ENSPLAG00000012223	sar1b	100	92.929	ENSHCOG00000010953	sar1b	100	92.929	Hippocampus_comes
ENSPLAG00000012223	sar1b	100	91.414	ENSIPUG00000020925	sar1b	100	91.414	Ictalurus_punctatus
ENSPLAG00000012223	sar1b	100	86.364	ENSIPUG00000010046	sar1b	100	86.364	Ictalurus_punctatus
ENSPLAG00000012223	sar1b	100	84.343	ENSKMAG00000014875	-	100	84.343	Kryptolebias_marmoratus
ENSPLAG00000012223	sar1b	100	93.434	ENSKMAG00000019693	sar1b	100	93.434	Kryptolebias_marmoratus
ENSPLAG00000012223	sar1b	100	85.354	ENSLBEG00000016945	-	100	85.354	Labrus_bergylta
ENSPLAG00000012223	sar1b	100	90.404	ENSLBEG00000027550	sar1b	100	90.404	Labrus_bergylta
ENSPLAG00000012223	sar1b	100	73.869	ENSLACG00000017029	-	100	73.869	Latimeria_chalumnae
ENSPLAG00000012223	sar1b	100	86.364	ENSLACG00000010795	sar1b	100	86.364	Latimeria_chalumnae
ENSPLAG00000012223	sar1b	100	89.899	ENSLOCG00000005214	-	100	89.899	Lepisosteus_oculatus
ENSPLAG00000012223	sar1b	100	93.434	ENSLOCG00000010197	sar1b	100	93.434	Lepisosteus_oculatus
ENSPLAG00000012223	sar1b	100	92.424	ENSMAMG00000021732	sar1b	100	92.424	Mastacembelus_armatus
ENSPLAG00000012223	sar1b	100	93.939	ENSMZEG00005008942	sar1b	100	93.939	Maylandia_zebra
ENSPLAG00000012223	sar1b	100	84.343	ENSMZEG00005001012	-	100	84.343	Maylandia_zebra
ENSPLAG00000012223	sar1b	90	91.620	ENSMGAG00000005387	-	91	91.620	Meleagris_gallopavo
ENSPLAG00000012223	sar1b	100	83.838	ENSMMOG00000013803	-	100	83.838	Mola_mola
ENSPLAG00000012223	sar1b	100	93.434	ENSMALG00000016635	sar1b	97	91.758	Monopterus_albus
ENSPLAG00000012223	sar1b	100	84.343	ENSNBRG00000014004	-	100	84.343	Neolamprologus_brichardi
ENSPLAG00000012223	sar1b	100	93.434	ENSNBRG00000008013	sar1b	100	93.434	Neolamprologus_brichardi
ENSPLAG00000012223	sar1b	100	93.434	ENSONIG00000017278	sar1b	100	93.434	Oreochromis_niloticus
ENSPLAG00000012223	sar1b	100	91.414	ENSORLG00000000932	sar1b	100	91.414	Oryzias_latipes
ENSPLAG00000012223	sar1b	100	91.414	ENSORLG00020021985	sar1b	100	91.414	Oryzias_latipes_hni
ENSPLAG00000012223	sar1b	100	91.414	ENSORLG00015007044	sar1b	100	91.414	Oryzias_latipes_hsok
ENSPLAG00000012223	sar1b	100	91.919	ENSOMEG00000001052	sar1b	100	91.919	Oryzias_melastigma
ENSPLAG00000012223	sar1b	100	91.919	ENSPKIG00000017353	-	100	91.919	Paramormyrops_kingsleyae
ENSPLAG00000012223	sar1b	100	92.929	ENSPKIG00000010688	sar1b	100	92.929	Paramormyrops_kingsleyae
ENSPLAG00000012223	sar1b	85	91.525	ENSPMGG00000001234	sar1b	91	93.103	Periophthalmus_magnuspinnatus
ENSPLAG00000012223	sar1b	100	83.085	ENSPMAG00000003593	sar1b	100	83.085	Petromyzon_marinus
ENSPLAG00000012223	sar1b	100	98.990	ENSPFOG00000005666	sar1b	100	98.990	Poecilia_formosa
ENSPLAG00000012223	sar1b	100	98.990	ENSPMEG00000016831	sar1b	100	98.990	Poecilia_mexicana
ENSPLAG00000012223	sar1b	84	87.179	ENSPREG00000002020	-	87	87.179	Poecilia_reticulata
ENSPLAG00000012223	sar1b	100	98.990	ENSPREG00000005312	sar1b	90	98.990	Poecilia_reticulata
ENSPLAG00000012223	sar1b	100	93.939	ENSPNYG00000012440	sar1b	100	93.939	Pundamilia_nyererei
ENSPLAG00000012223	sar1b	100	84.343	ENSPNYG00000021357	-	100	84.343	Pundamilia_nyererei
ENSPLAG00000012223	sar1b	100	85.859	ENSPNAG00000001123	-	100	85.859	Pygocentrus_nattereri
ENSPLAG00000012223	sar1b	100	93.434	ENSPNAG00000014683	sar1b	100	93.434	Pygocentrus_nattereri
ENSPLAG00000012223	sar1b	100	92.424	ENSSFOG00015018128	-	100	92.424	Scleropages_formosus
ENSPLAG00000012223	sar1b	100	93.434	ENSSFOG00015020051	sar1b	100	93.434	Scleropages_formosus
ENSPLAG00000012223	sar1b	100	90.404	ENSSMAG00000007106	sar1b	80	90.404	Scophthalmus_maximus
ENSPLAG00000012223	sar1b	100	84.848	ENSSMAG00000002165	-	100	84.848	Scophthalmus_maximus
ENSPLAG00000012223	sar1b	100	94.444	ENSSDUG00000020926	sar1b	100	94.444	Seriola_dumerili
ENSPLAG00000012223	sar1b	100	84.343	ENSSDUG00000019629	-	100	84.343	Seriola_dumerili
ENSPLAG00000012223	sar1b	100	84.343	ENSSLDG00000024197	-	100	84.343	Seriola_lalandi_dorsalis
ENSPLAG00000012223	sar1b	100	94.444	ENSSLDG00000017052	sar1b	100	94.444	Seriola_lalandi_dorsalis
ENSPLAG00000012223	sar1b	100	90.404	ENSSPUG00000010247	-	100	90.404	Sphenodon_punctatus
ENSPLAG00000012223	sar1b	100	84.343	ENSSPAG00000015626	-	100	84.343	Stegastes_partitus
ENSPLAG00000012223	sar1b	100	94.444	ENSSPAG00000017634	sar1b	100	94.444	Stegastes_partitus
ENSPLAG00000012223	sar1b	100	87.374	ENSTRUG00000023908	sar1b	100	87.374	Takifugu_rubripes
ENSPLAG00000012223	sar1b	100	89.899	ENSTNIG00000016097	sar1b	100	89.899	Tetraodon_nigroviridis
ENSPLAG00000012223	sar1b	100	75.714	ENSXCOG00000006154	-	91	75.714	Xiphophorus_couchianus
ENSPLAG00000012223	sar1b	90	98.315	ENSXCOG00000004160	sar1b	87	98.315	Xiphophorus_couchianus
ENSPLAG00000012223	sar1b	100	98.485	ENSXMAG00000008294	sar1b	100	98.485	Xiphophorus_maculatus