EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000012431 (Gene tree)
Gene ID
106958188
Gene Symbol
-
Alias
-
Full Name
RNA-binding protein Musashi homolog 1-like
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Plus strand
Length
66642 bases
Position
chrKQ545362.1:54404-121045
Accession
106958188
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000009592RRM_1PF00076.226.1e-3412
ENSPLAP00000009592RRM_1PF00076.226.1e-3422
ENSPLAP00000009603RRM_1PF00076.227e-3412
ENSPLAP00000009603RRM_1PF00076.227e-3422
ENSPLAP00000025406RRM_1PF00076.229.8e-3412
ENSPLAP00000025406RRM_1PF00076.229.8e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000000962-1032-ENSPLAP00000009592343 (aa)--
ENSPLAT00000000945-4469XM_015049974ENSPLAP00000025406407 (aa)XP_014905460-
ENSPLAT00000000936-4689-ENSPLAP00000009603361 (aa)-UPI00044383B8
Gene Model
Click here to download ENSPLAG00000012431's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000012431's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000012431-5432.487ENSPLAG00000008468tardbp5035.119
ENSPLAG00000012431-9791.738ENSPLAG00000014025-10091.738
ENSPLAG00000012431-5541.830ENSPLAG00000009033HNRNPA37537.991
ENSPLAG00000012431-6240.179ENSPLAG00000008336dazap15740.179
ENSPLAG00000012431-5640.278ENSPLAG00000019814-9636.066
ENSPLAG00000012431-6835.955ENSPLAG00000006542rbm24a8537.500
ENSPLAG00000012431-5237.791ENSPLAG00000015223-9831.715
ENSPLAG00000012431-5242.614ENSPLAG00000013254hnrnpa1b9738.991
ENSPLAG00000012431-5375.182ENSPLAG00000000436msi2a7275.182
ENSPLAG00000012431-5244.681ENSPLAG00000009450hnrnpaba8537.234
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000012431-9783.791ENSG00000135097MSI110083.791Homo_sapiens
ENSPLAG00000012431-9798.286ENSAPOG00000003191MSI110098.286Acanthochromis_polyacanthus
ENSPLAG00000012431-9791.738ENSAPOG00000023458-10091.738Acanthochromis_polyacanthus
ENSPLAG00000012431-9190.769ENSAMEG00000013302MSI18390.769Ailuropoda_melanoleuca
ENSPLAG00000012431-9290.881ENSACIG00000017754-8090.881Amphilophus_citrinellus
ENSPLAG00000012431-9583.232ENSAOCG00000009031-9884.451Amphiprion_ocellaris
ENSPLAG00000012431-9798.286ENSAOCG00000003804MSI110098.286Amphiprion_ocellaris
ENSPLAG00000012431-9798.286ENSAPEG00000003245MSI110098.286Amphiprion_percula
ENSPLAG00000012431-9791.738ENSAPEG00000006857-8491.738Amphiprion_percula
ENSPLAG00000012431-9787.395ENSATEG00000017059MSI110087.395Anabas_testudineus
ENSPLAG00000012431-9790.113ENSATEG00000023779-10090.113Anabas_testudineus
ENSPLAG00000012431-9783.425ENSACAG00000002762MSI110084.254Anolis_carolinensis
ENSPLAG00000012431-8083.681ENSANAG00000027901-8883.681Aotus_nancymaae
ENSPLAG00000012431-9783.791ENSANAG00000027151MSI110083.791Aotus_nancymaae
ENSPLAG00000012431-9792.000ENSACLG00000000117-10092.966Astatotilapia_calliptera
ENSPLAG00000012431-9797.436ENSACLG00000011230MSI110097.436Astatotilapia_calliptera
ENSPLAG00000012431-9189.028ENSAMXG00000038960msi17689.028Astyanax_mexicanus
ENSPLAG00000012431-9783.791ENSBTAG00000009800MSI110085.924Bos_taurus
ENSPLAG00000012431-9783.791ENSCJAG00000008578MSI110083.791Callithrix_jacchus
ENSPLAG00000012431-9783.516ENSCAFG00000010283MSI110083.516Canis_familiaris
ENSPLAG00000012431-9185.531ENSCAFG00020020585MSI110085.531Canis_lupus_dingo
ENSPLAG00000012431-9782.385ENSCHIG00000024304MSI110082.385Capra_hircus
ENSPLAG00000012431-9185.321ENSTSYG00000033949MSI19585.321Carlito_syrichta
ENSPLAG00000012431-9185.348ENSCAPG00000003919MSI17885.348Cavia_aperea
ENSPLAG00000012431-9185.965ENSCPOG00000012361MSI110085.965Cavia_porcellus
ENSPLAG00000012431-9783.791ENSCCAG00000035567MSI110083.791Cebus_capucinus
ENSPLAG00000012431-9783.791ENSCATG00000030019MSI110083.791Cercocebus_atys
ENSPLAG00000012431-9185.965ENSCLAG00000011329MSI110085.965Chinchilla_lanigera
ENSPLAG00000012431-7682.437ENSCSAG00000002265MSI19682.437Chlorocebus_sabaeus
ENSPLAG00000012431-9786.686ENSCPBG00000011349MSI110086.686Chrysemys_picta_bellii
ENSPLAG00000012431-9185.366ENSCANG00000040651MSI110085.366Colobus_angolensis_palliatus
ENSPLAG00000012431-9783.791ENSCGRG00001018883Msi110083.791Cricetulus_griseus_chok1gshd
ENSPLAG00000012431-9185.410ENSCGRG00000002191Msi17285.410Cricetulus_griseus_crigri
ENSPLAG00000012431-9790.571ENSCSEG00000008352-10090.571Cynoglossus_semilaevis
ENSPLAG00000012431-9183.792ENSCSEG00000011032MSI110083.792Cynoglossus_semilaevis
ENSPLAG00000012431-9797.714ENSCSEG00000005834-10097.714Cynoglossus_semilaevis
ENSPLAG00000012431-9792.286ENSCVAG00000009100MSI110092.286Cyprinodon_variegatus
ENSPLAG00000012431-5074.627ENSCVAG00000017430zgc:1107969474.627Cyprinodon_variegatus
ENSPLAG00000012431-7380.645ENSCVAG00000017463-8980.645Cyprinodon_variegatus
ENSPLAG00000012431-7690.698ENSDARG00000102015CABZ01037298.19890.698Danio_rerio
ENSPLAG00000012431-9482.085ENSDARG00000010710msi110092.523Danio_rerio
ENSPLAG00000012431-9182.278ENSDNOG00000005713MSI19182.278Dasypus_novemcinctus
ENSPLAG00000012431-9184.731ENSDORG00000005610Msi19484.731Dipodomys_ordii
ENSPLAG00000012431-9182.317ENSETEG00000004756MSI110082.317Echinops_telfairi
ENSPLAG00000012431-9783.791ENSEASG00005004736MSI110083.791Equus_asinus_asinus
ENSPLAG00000012431-9783.791ENSECAG00000017526MSI110083.791Equus_caballus
ENSPLAG00000012431-9185.673ENSELUG00000023219MSI19285.673Esox_lucius
ENSPLAG00000012431-9187.156ENSELUG00000023280-10086.850Esox_lucius
ENSPLAG00000012431-9783.791ENSFCAG00000011007MSI110083.791Felis_catus
ENSPLAG00000012431-9188.667ENSFALG00000007574MSI110088.667Ficedula_albicollis
ENSPLAG00000012431-9185.061ENSFDAG00000019586MSI110085.061Fukomys_damarensis
ENSPLAG00000012431-9798.857ENSFHEG00000003560-10098.857Fundulus_heteroclitus
ENSPLAG00000012431-9792.023ENSFHEG00000022446MSI110092.023Fundulus_heteroclitus
ENSPLAG00000012431-9790.286ENSGMOG00000001006MSI19990.000Gadus_morhua
ENSPLAG00000012431-9785.311ENSGMOG00000017838-10085.634Gadus_morhua
ENSPLAG00000012431-9188.931ENSGALG00000007227MSI19875.318Gallus_gallus
ENSPLAG00000012431-10090.379ENSGAFG00000021522MSI19498.780Gambusia_affinis
ENSPLAG00000012431-9769.972ENSGAFG00000005860-10069.972Gambusia_affinis
ENSPLAG00000012431-9790.313ENSGACG00000012679MSI110090.313Gasterosteus_aculeatus
ENSPLAG00000012431-9788.154ENSGACG00000008674-10088.154Gasterosteus_aculeatus
ENSPLAG00000012431-9786.402ENSGAGG00000016037MSI110086.402Gopherus_agassizii
ENSPLAG00000012431-9185.350ENSGGOG00000010328MSI110085.350Gorilla_gorilla
ENSPLAG00000012431-9797.436ENSHBUG00000021921MSI110097.436Haplochromis_burtoni
ENSPLAG00000012431-9792.000ENSHBUG00000011841-10092.000Haplochromis_burtoni
ENSPLAG00000012431-9783.516ENSHGLG00000012782MSI110083.516Heterocephalus_glaber_female
ENSPLAG00000012431-9185.061ENSHGLG00100016848MSI110085.061Heterocephalus_glaber_male
ENSPLAG00000012431-8795.860ENSHCOG00000012019MSI19595.860Hippocampus_comes
ENSPLAG00000012431-9787.571ENSHCOG00000012067-10087.571Hippocampus_comes
ENSPLAG00000012431-9787.749ENSIPUG00000001976msi110087.749Ictalurus_punctatus
ENSPLAG00000012431-9185.531ENSSTOG00000009799MSI110085.531Ictidomys_tridecemlineatus
ENSPLAG00000012431-9772.857ENSJJAG00000010643-10072.857Jaculus_jaculus
ENSPLAG00000012431-9783.791ENSJJAG00000010463Msi110083.791Jaculus_jaculus
ENSPLAG00000012431-9791.714ENSKMAG00000011251MSI110091.714Kryptolebias_marmoratus
ENSPLAG00000012431-9490.000ENSKMAG00000019877-10092.966Kryptolebias_marmoratus
ENSPLAG00000012431-9792.023ENSLBEG00000008789MSI110092.023Labrus_bergylta
ENSPLAG00000012431-9798.286ENSLBEG00000001375-10098.286Labrus_bergylta
ENSPLAG00000012431-9182.558ENSLACG00000018287MSI110082.558Latimeria_chalumnae
ENSPLAG00000012431-5176.786ENSLOCG00000008618zgc:1107967176.786Lepisosteus_oculatus
ENSPLAG00000012431-9074.522ENSLAFG00000009412MSI110076.435Loxodonta_africana
ENSPLAG00000012431-9185.965ENSMFAG00000001798MSI110085.965Macaca_fascicularis
ENSPLAG00000012431-9185.965ENSMMUG00000031527MSI19685.057Macaca_mulatta
ENSPLAG00000012431-9783.791ENSMNEG00000040034MSI110083.791Macaca_nemestrina
ENSPLAG00000012431-9185.366ENSMLEG00000003921MSI110085.366Mandrillus_leucophaeus
ENSPLAG00000012431-9791.143ENSMAMG00000002279MSI110091.143Mastacembelus_armatus
ENSPLAG00000012431-9797.429ENSMAMG00000018426-10097.429Mastacembelus_armatus
ENSPLAG00000012431-9797.436ENSMZEG00005026892MSI110097.436Maylandia_zebra
ENSPLAG00000012431-9792.000ENSMZEG00005000340-10092.000Maylandia_zebra
ENSPLAG00000012431-6492.308ENSMGAG00000016518-10092.308Meleagris_gallopavo
ENSPLAG00000012431-6789.956ENSMAUG00000016820Msi19988.843Mesocricetus_auratus
ENSPLAG00000012431-9783.791ENSMICG00000033181MSI110083.791Microcebus_murinus
ENSPLAG00000012431-9783.516ENSMOCG00000002286Msi110083.516Microtus_ochrogaster
ENSPLAG00000012431-9781.381ENSMMOG00000010492MSI19781.381Mola_mola
ENSPLAG00000012431-9785.714ENSMMOG00000012265-10085.714Mola_mola
ENSPLAG00000012431-9058.859ENSMODG00000003189-10059.036Monodelphis_domestica
ENSPLAG00000012431-9792.000ENSMALG00000017889MSI110092.000Monopterus_albus
ENSPLAG00000012431-9196.942ENSMALG00000001426-10096.942Monopterus_albus
ENSPLAG00000012431-9783.242MGP_CAROLIEiJ_G0027626Msi110083.242Mus_caroli
ENSPLAG00000012431-9783.242ENSMUSG00000054256Msi19987.963Mus_musculus
ENSPLAG00000012431-9786.080MGP_PahariEiJ_G0024206Msi110086.080Mus_pahari
ENSPLAG00000012431-9783.242MGP_SPRETEiJ_G0028624Msi110083.242Mus_spretus
ENSPLAG00000012431-9185.531ENSMPUG00000003168MSI110085.531Mustela_putorius_furo
ENSPLAG00000012431-9176.488ENSMLUG00000010313MSI110076.488Myotis_lucifugus
ENSPLAG00000012431-9185.410ENSNGAG00000014508Msi19185.410Nannospalax_galili
ENSPLAG00000012431-9792.000ENSNBRG00000000841-10092.000Neolamprologus_brichardi
ENSPLAG00000012431-8588.525ENSNBRG00000018012MSI19988.525Neolamprologus_brichardi
ENSPLAG00000012431-8775.610ENSNLEG00000015636MSI110075.610Nomascus_leucogenys
ENSPLAG00000012431-9166.159ENSMEUG00000015759MSI110066.159Notamacropus_eugenii
ENSPLAG00000012431-8777.778ENSOPRG00000016879MSI110077.778Ochotona_princeps
ENSPLAG00000012431-9185.366ENSODEG00000006328MSI110085.366Octodon_degus
ENSPLAG00000012431-9792.000ENSONIG00000011182MSI110092.000Oreochromis_niloticus
ENSPLAG00000012431-9794.231ENSONIG00000019452-10094.231Oreochromis_niloticus
ENSPLAG00000012431-9185.852ENSOCUG00000027716MSI110085.852Oryctolagus_cuniculus
ENSPLAG00000012431-9791.453ENSORLG00000019978-10091.453Oryzias_latipes
ENSPLAG00000012431-9798.286ENSORLG00000029593MSI110098.286Oryzias_latipes
ENSPLAG00000012431-9898.017ENSORLG00020008266MSI19992.988Oryzias_latipes_hni
ENSPLAG00000012431-9989.256ENSORLG00020001208-7489.256Oryzias_latipes_hni
ENSPLAG00000012431-9989.256ENSORLG00015013672-7984.384Oryzias_latipes_hsok
ENSPLAG00000012431-9798.286ENSORLG00015003916MSI110098.286Oryzias_latipes_hsok
ENSPLAG00000012431-9798.000ENSOMEG00000002272-10098.000Oryzias_melastigma
ENSPLAG00000012431-9791.738ENSOMEG00000017536MSI110091.738Oryzias_melastigma
ENSPLAG00000012431-9682.143ENSOGAG00000003847MSI19982.143Otolemur_garnettii
ENSPLAG00000012431-9182.727ENSOARG00000012097MSI110082.727Ovis_aries
ENSPLAG00000012431-9185.366ENSPPAG00000043073MSI110085.366Pan_paniscus
ENSPLAG00000012431-9783.791ENSPPRG00000000370MSI110083.791Panthera_pardus
ENSPLAG00000012431-9185.531ENSPTIG00000008913MSI110085.531Panthera_tigris_altaica
ENSPLAG00000012431-9783.791ENSPTRG00000005531MSI110083.791Pan_troglodytes
ENSPLAG00000012431-9783.516ENSPANG00000006335MSI110083.516Papio_anubis
ENSPLAG00000012431-9793.714ENSPKIG00000016497MSI110093.714Paramormyrops_kingsleyae
ENSPLAG00000012431-9790.571ENSPKIG00000023575-10090.571Paramormyrops_kingsleyae
ENSPLAG00000012431-9681.627ENSPSIG00000011608-9385.976Pelodiscus_sinensis
ENSPLAG00000012431-7681.140ENSPSIG00000009621-10081.140Pelodiscus_sinensis
ENSPLAG00000012431-9575.000ENSPMGG00000007743-9870.690Periophthalmus_magnuspinnatus
ENSPLAG00000012431-8786.984ENSPMGG00000000514MSI19786.984Periophthalmus_magnuspinnatus
ENSPLAG00000012431-9183.976ENSPEMG00000010491Msi19583.976Peromyscus_maniculatus_bairdii
ENSPLAG00000012431-9791.738ENSPFOG00000013113MSI110091.738Poecilia_formosa
ENSPLAG00000012431-10099.509ENSPFOG00000008319-10099.509Poecilia_formosa
ENSPLAG00000012431-10098.771ENSPMEG00000007025-10098.771Poecilia_mexicana
ENSPLAG00000012431-9791.738ENSPMEG00000012796MSI110091.738Poecilia_mexicana
ENSPLAG00000012431-9489.935ENSPREG00000021416-9888.338Poecilia_reticulata
ENSPLAG00000012431-7680.296ENSPREG00000014574-10080.296Poecilia_reticulata
ENSPLAG00000012431-9782.967ENSPPYG00000005027MSI110082.967Pongo_abelii
ENSPLAG00000012431-7388.832ENSPCAG00000002300MSI17288.832Procavia_capensis
ENSPLAG00000012431-9783.791ENSPCOG00000017341MSI110083.791Propithecus_coquereli
ENSPLAG00000012431-9169.512ENSPVAG00000002225MSI110069.512Pteropus_vampyrus
ENSPLAG00000012431-9797.436ENSPNYG00000004379MSI110097.436Pundamilia_nyererei
ENSPLAG00000012431-9792.000ENSPNYG00000002529-10092.000Pundamilia_nyererei
ENSPLAG00000012431-9788.319ENSPNAG00000019337msi110088.319Pygocentrus_nattereri
ENSPLAG00000012431-9185.209ENSRNOG00000001156Msi110085.209Rattus_norvegicus
ENSPLAG00000012431-9185.531ENSRBIG00000036889MSI110085.531Rhinopithecus_bieti
ENSPLAG00000012431-9185.152ENSRROG00000041076MSI19385.152Rhinopithecus_roxellana
ENSPLAG00000012431-9185.965ENSSBOG00000030259MSI19985.965Saimiri_boliviensis_boliviensis
ENSPLAG00000012431-9174.837ENSSHAG00000006834MSI110074.837Sarcophilus_harrisii
ENSPLAG00000012431-9195.427ENSSFOG00015014964-9595.427Scleropages_formosus
ENSPLAG00000012431-9192.447ENSSFOG00015005350MSI19692.447Scleropages_formosus
ENSPLAG00000012431-9197.318ENSSMAG00000009156-7397.030Scophthalmus_maximus
ENSPLAG00000012431-9186.709ENSSMAG00000018824MSI19786.709Scophthalmus_maximus
ENSPLAG00000012431-9798.571ENSSDUG00000022697-10098.571Seriola_dumerili
ENSPLAG00000012431-9791.738ENSSDUG00000001027MSI110091.738Seriola_dumerili
ENSPLAG00000012431-9791.738ENSSLDG00000016832MSI110091.738Seriola_lalandi_dorsalis
ENSPLAG00000012431-9488.679ENSSLDG00000018706-9988.679Seriola_lalandi_dorsalis
ENSPLAG00000012431-9786.402ENSSPUG00000015741MSI110086.402Sphenodon_punctatus
ENSPLAG00000012431-9198.476ENSSPAG00000013098-10098.476Stegastes_partitus
ENSPLAG00000012431-7676.355ENSSPAG00000014085-10076.355Stegastes_partitus
ENSPLAG00000012431-5380.247ENSSPAG00000015573zgc:1107968280.247Stegastes_partitus
ENSPLAG00000012431-9783.516ENSSSCG00000029365MSI110085.209Sus_scrofa
ENSPLAG00000012431-9186.471ENSTGUG00000009534MSI110086.471Taeniopygia_guttata
ENSPLAG00000012431-7890.698ENSTRUG00000016249MSI110081.028Takifugu_rubripes
ENSPLAG00000012431-9487.662ENSTRUG00000015636-7987.662Takifugu_rubripes
ENSPLAG00000012431-9786.686ENSTNIG00000011469MSI110086.686Tetraodon_nigroviridis
ENSPLAG00000012431-9366.471ENSTNIG00000019814-9766.471Tetraodon_nigroviridis
ENSPLAG00000012431-9176.557ENSTBEG00000007182MSI110076.190Tupaia_belangeri
ENSPLAG00000012431-7388.346ENSTTRG00000005663MSI17888.346Tursiops_truncatus
ENSPLAG00000012431-6591.710ENSUAMG00000015514MSI19487.500Ursus_americanus
ENSPLAG00000012431-9182.410ENSUMAG00000006176MSI18882.410Ursus_maritimus
ENSPLAG00000012431-9185.410ENSVVUG00000020993MSI110084.685Vulpes_vulpes
ENSPLAG00000012431-9783.429ENSXETG00000012216msi110083.714Xenopus_tropicalis
ENSPLAG00000012431-9980.000ENSXCOG00000017605MSI19579.706Xiphophorus_couchianus
ENSPLAG00000012431-9792.286ENSXMAG00000027103MSI110080.112Xiphophorus_maculatus
ENSPLAG00000012431-9799.143ENSXMAG00000018237-10099.143Xiphophorus_maculatus

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