EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000012779 (Gene tree)
Gene ID: 106935632
Gene Symbol: apex1
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 2997 bases
Position: chrKQ547301.1:33572-36568
Accession: 106935632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000025642	Exo_endo_phos	PF03372.23	4.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000000353	-	1501	XM_015016187	ENSPLAP00000025642	310 (aa)	XP_014871673	UPI00072EED21

Gene Model

Click here to download ENSPLAG00000012779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000012779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000012779	apex1	99	66.772	ENSG00000100823	APEX1	88	71.685	Homo_sapiens
ENSPLAG00000012779	apex1	100	90.323	ENSAPOG00000017002	apex1	100	90.323	Acanthochromis_polyacanthus
ENSPLAG00000012779	apex1	99	67.089	ENSAMEG00000005418	APEX1	88	72.043	Ailuropoda_melanoleuca
ENSPLAG00000012779	apex1	89	91.336	ENSACIG00000010653	apex1	95	91.429	Amphilophus_citrinellus
ENSPLAG00000012779	apex1	100	90.000	ENSAOCG00000009649	apex1	100	90.000	Amphiprion_ocellaris
ENSPLAG00000012779	apex1	100	90.323	ENSAPEG00000021453	apex1	100	90.323	Amphiprion_percula
ENSPLAG00000012779	apex1	99	92.557	ENSATEG00000002883	apex1	97	92.557	Anabas_testudineus
ENSPLAG00000012779	apex1	90	72.143	ENSACAG00000008099	APEX1	88	72.143	Anolis_carolinensis
ENSPLAG00000012779	apex1	90	72.401	ENSANAG00000030117	APEX1	88	72.401	Aotus_nancymaae
ENSPLAG00000012779	apex1	100	91.290	ENSACLG00000018441	apex1	100	91.290	Astatotilapia_calliptera
ENSPLAG00000012779	apex1	99	85.806	ENSAMXG00000034699	apex1	99	85.484	Astyanax_mexicanus
ENSPLAG00000012779	apex1	99	66.456	ENSBTAG00000002745	APEX1	88	71.326	Bos_taurus
ENSPLAG00000012779	apex1	93	42.907	WBGene00001372	exo-3	92	44.776	Caenorhabditis_elegans
ENSPLAG00000012779	apex1	90	72.401	ENSCJAG00000009726	APEX1	88	72.401	Callithrix_jacchus
ENSPLAG00000012779	apex1	99	67.823	ENSCAFG00000032033	APEX1	88	72.401	Canis_familiaris
ENSPLAG00000012779	apex1	99	67.823	ENSCAFG00020014377	-	88	72.401	Canis_lupus_dingo
ENSPLAG00000012779	apex1	53	60.819	ENSCAFG00020023002	-	74	68.421	Canis_lupus_dingo
ENSPLAG00000012779	apex1	99	66.456	ENSCHIG00000007298	-	88	71.326	Capra_hircus
ENSPLAG00000012779	apex1	89	56.115	ENSCHIG00000014537	-	89	55.396	Capra_hircus
ENSPLAG00000012779	apex1	99	66.877	ENSTSYG00000034813	APEX1	88	70.968	Carlito_syrichta
ENSPLAG00000012779	apex1	87	65.818	ENSCAPG00000016235	APEX1	91	72.458	Cavia_aperea
ENSPLAG00000012779	apex1	99	68.139	ENSCPOG00000030909	APEX1	88	72.401	Cavia_porcellus
ENSPLAG00000012779	apex1	90	72.401	ENSCCAG00000033056	-	88	72.401	Cebus_capucinus
ENSPLAG00000012779	apex1	99	58.861	ENSCCAG00000031931	-	87	62.724	Cebus_capucinus
ENSPLAG00000012779	apex1	99	66.456	ENSCATG00000015580	APEX1	88	71.326	Cercocebus_atys
ENSPLAG00000012779	apex1	99	67.823	ENSCLAG00000001002	APEX1	88	72.043	Chinchilla_lanigera
ENSPLAG00000012779	apex1	99	66.772	ENSCSAG00000016670	-	88	71.685	Chlorocebus_sabaeus
ENSPLAG00000012779	apex1	99	66.772	ENSCSAG00000016685	-	88	71.685	Chlorocebus_sabaeus
ENSPLAG00000012779	apex1	99	69.937	ENSCPBG00000009567	APEX1	99	69.937	Chrysemys_picta_bellii
ENSPLAG00000012779	apex1	94	56.701	ENSCING00000008137	-	85	59.925	Ciona_intestinalis
ENSPLAG00000012779	apex1	99	50.159	ENSCSAVG00000007144	-	100	54.264	Ciona_savignyi
ENSPLAG00000012779	apex1	99	67.089	ENSCANG00000030726	APEX1	99	67.089	Colobus_angolensis_palliatus
ENSPLAG00000012779	apex1	99	65.615	ENSCGRG00001017046	Apex1	88	70.251	Cricetulus_griseus_chok1gshd
ENSPLAG00000012779	apex1	99	65.615	ENSCGRG00000008984	Apex1	88	70.251	Cricetulus_griseus_crigri
ENSPLAG00000012779	apex1	100	87.419	ENSCSEG00000017499	apex1	99	87.419	Cynoglossus_semilaevis
ENSPLAG00000012779	apex1	100	93.548	ENSCVAG00000022075	apex1	100	93.548	Cyprinodon_variegatus
ENSPLAG00000012779	apex1	99	85.761	ENSDARG00000045843	apex1	99	85.761	Danio_rerio
ENSPLAG00000012779	apex1	99	64.038	ENSDNOG00000042234	APEX1	83	68.817	Dasypus_novemcinctus
ENSPLAG00000012779	apex1	99	67.192	ENSDORG00000001616	Apex1	88	71.685	Dipodomys_ordii
ENSPLAG00000012779	apex1	99	66.772	ENSETEG00000004855	-	88	71.685	Echinops_telfairi
ENSPLAG00000012779	apex1	76	60.504	ENSEBUG00000000622	-	92	60.504	Eptatretus_burgeri
ENSPLAG00000012779	apex1	99	68.454	ENSEASG00005017489	APEX1	65	72.760	Equus_asinus_asinus
ENSPLAG00000012779	apex1	99	68.454	ENSECAG00000022325	APEX1	72	72.760	Equus_caballus
ENSPLAG00000012779	apex1	86	72.119	ENSEEUG00000012569	APEX1	93	72.119	Erinaceus_europaeus
ENSPLAG00000012779	apex1	99	82.581	ENSELUG00000021706	apex1	99	84.516	Esox_lucius
ENSPLAG00000012779	apex1	99	68.454	ENSFCAG00000030869	APEX1	88	72.760	Felis_catus
ENSPLAG00000012779	apex1	99	68.770	ENSFDAG00000006120	APEX1	88	73.118	Fukomys_damarensis
ENSPLAG00000012779	apex1	100	92.903	ENSFHEG00000009031	apex1	83	92.903	Fundulus_heteroclitus
ENSPLAG00000012779	apex1	100	76.452	ENSGMOG00000007943	apex1	99	76.452	Gadus_morhua
ENSPLAG00000012779	apex1	100	97.419	ENSGAFG00000005311	apex1	100	97.419	Gambusia_affinis
ENSPLAG00000012779	apex1	100	89.677	ENSGACG00000019497	apex1	99	91.729	Gasterosteus_aculeatus
ENSPLAG00000012779	apex1	99	70.570	ENSGAGG00000014999	APEX1	99	69.937	Gopherus_agassizii
ENSPLAG00000012779	apex1	99	66.456	ENSGGOG00000002128	APEX1	88	71.326	Gorilla_gorilla
ENSPLAG00000012779	apex1	100	91.290	ENSHBUG00000005894	apex1	100	91.290	Haplochromis_burtoni
ENSPLAG00000012779	apex1	99	69.401	ENSHGLG00000002848	APEX1	88	72.760	Heterocephalus_glaber_female
ENSPLAG00000012779	apex1	99	69.401	ENSHGLG00100017878	APEX1	88	72.760	Heterocephalus_glaber_male
ENSPLAG00000012779	apex1	100	86.495	ENSHCOG00000009961	apex1	100	86.495	Hippocampus_comes
ENSPLAG00000012779	apex1	99	84.516	ENSIPUG00000005799	apex1	99	84.516	Ictalurus_punctatus
ENSPLAG00000012779	apex1	99	67.823	ENSSTOG00000010096	APEX1	88	72.401	Ictidomys_tridecemlineatus
ENSPLAG00000012779	apex1	99	59.810	ENSJJAG00000003660	-	99	58.861	Jaculus_jaculus
ENSPLAG00000012779	apex1	99	67.089	ENSJJAG00000012067	-	88	71.326	Jaculus_jaculus
ENSPLAG00000012779	apex1	92	62.105	ENSJJAG00000020465	-	90	63.082	Jaculus_jaculus
ENSPLAG00000012779	apex1	100	92.258	ENSKMAG00000021171	apex1	100	92.258	Kryptolebias_marmoratus
ENSPLAG00000012779	apex1	100	89.032	ENSLBEG00000010248	apex1	100	89.032	Labrus_bergylta
ENSPLAG00000012779	apex1	99	72.611	ENSLACG00000008617	APEX1	89	77.143	Latimeria_chalumnae
ENSPLAG00000012779	apex1	99	77.636	ENSLOCG00000015516	apex1	99	76.677	Lepisosteus_oculatus
ENSPLAG00000012779	apex1	90	72.760	ENSLAFG00000021872	APEX1	88	72.760	Loxodonta_africana
ENSPLAG00000012779	apex1	99	66.456	ENSMFAG00000002565	APEX1	88	71.326	Macaca_fascicularis
ENSPLAG00000012779	apex1	99	66.456	ENSMMUG00000048039	APEX1	88	71.326	Macaca_mulatta
ENSPLAG00000012779	apex1	99	66.562	ENSMNEG00000036944	APEX1	88	71.326	Macaca_nemestrina
ENSPLAG00000012779	apex1	99	66.456	ENSMLEG00000042125	APEX1	88	71.326	Mandrillus_leucophaeus
ENSPLAG00000012779	apex1	100	92.581	ENSMAMG00000023526	apex1	100	92.581	Mastacembelus_armatus
ENSPLAG00000012779	apex1	100	91.290	ENSMZEG00005014187	apex1	100	91.290	Maylandia_zebra
ENSPLAG00000012779	apex1	99	66.139	ENSMAUG00000013994	Apex1	88	69.892	Mesocricetus_auratus
ENSPLAG00000012779	apex1	99	66.772	ENSMICG00000043554	APEX1	99	66.772	Microcebus_murinus
ENSPLAG00000012779	apex1	99	67.192	ENSMOCG00000013721	Apex1	88	72.401	Microtus_ochrogaster
ENSPLAG00000012779	apex1	100	86.174	ENSMMOG00000010031	apex1	97	86.174	Mola_mola
ENSPLAG00000012779	apex1	90	70.251	ENSMODG00000007125	APEX1	87	70.251	Monodelphis_domestica
ENSPLAG00000012779	apex1	90	82.857	ENSMALG00000011699	apex1	75	82.857	Monopterus_albus
ENSPLAG00000012779	apex1	99	67.834	MGP_CAROLIEiJ_G0019209	Apex1	99	68.354	Mus_caroli
ENSPLAG00000012779	apex1	99	67.619	ENSMUSG00000035960	Apex1	99	67.619	Mus_musculus
ENSPLAG00000012779	apex1	99	67.619	MGP_PahariEiJ_G0030232	Apex1	99	67.823	Mus_pahari
ENSPLAG00000012779	apex1	99	67.619	MGP_SPRETEiJ_G0020101	Apex1	99	67.619	Mus_spretus
ENSPLAG00000012779	apex1	99	67.085	ENSMLUG00000028957	APEX1	87	71.685	Myotis_lucifugus
ENSPLAG00000012779	apex1	99	68.139	ENSNGAG00000002725	-	87	72.464	Nannospalax_galili
ENSPLAG00000012779	apex1	87	56.115	ENSNGAG00000021748	-	72	58.333	Nannospalax_galili
ENSPLAG00000012779	apex1	100	91.290	ENSNBRG00000005334	apex1	91	91.290	Neolamprologus_brichardi
ENSPLAG00000012779	apex1	99	66.456	ENSNLEG00000010839	APEX1	99	66.456	Nomascus_leucogenys
ENSPLAG00000012779	apex1	99	65.924	ENSMEUG00000014519	APEX1	89	69.534	Notamacropus_eugenii
ENSPLAG00000012779	apex1	99	67.089	ENSOPRG00000014029	APEX1	88	70.968	Ochotona_princeps
ENSPLAG00000012779	apex1	99	52.632	ENSODEG00000006583	-	87	55.439	Octodon_degus
ENSPLAG00000012779	apex1	90	55.914	ENSODEG00000004777	-	83	59.524	Octodon_degus
ENSPLAG00000012779	apex1	99	68.454	ENSODEG00000001703	-	88	72.760	Octodon_degus
ENSPLAG00000012779	apex1	100	91.290	ENSONIG00000012089	apex1	100	91.290	Oreochromis_niloticus
ENSPLAG00000012779	apex1	92	68.421	ENSOANG00000008836	APEX1	68	70.182	Ornithorhynchus_anatinus
ENSPLAG00000012779	apex1	99	67.823	ENSOCUG00000005022	APEX1	88	72.401	Oryctolagus_cuniculus
ENSPLAG00000012779	apex1	100	91.640	ENSORLG00000012378	apex1	100	91.640	Oryzias_latipes
ENSPLAG00000012779	apex1	100	91.640	ENSORLG00020021371	apex1	100	91.640	Oryzias_latipes_hni
ENSPLAG00000012779	apex1	100	91.640	ENSORLG00015020089	apex1	100	91.640	Oryzias_latipes_hsok
ENSPLAG00000012779	apex1	100	90.675	ENSOMEG00000018876	apex1	100	90.675	Oryzias_melastigma
ENSPLAG00000012779	apex1	98	61.184	ENSOGAG00000029355	-	89	64.516	Otolemur_garnettii
ENSPLAG00000012779	apex1	99	67.722	ENSOGAG00000013335	-	88	72.760	Otolemur_garnettii
ENSPLAG00000012779	apex1	96	63.725	ENSOARG00000001876	-	87	68.401	Ovis_aries
ENSPLAG00000012779	apex1	99	66.772	ENSOARG00000019740	-	88	71.685	Ovis_aries
ENSPLAG00000012779	apex1	96	57.947	ENSOARG00000014424	-	89	59.498	Ovis_aries
ENSPLAG00000012779	apex1	99	66.772	ENSPPAG00000038760	APEX1	89	71.685	Pan_paniscus
ENSPLAG00000012779	apex1	99	67.405	ENSPPRG00000011794	APEX1	88	72.760	Panthera_pardus
ENSPLAG00000012779	apex1	99	68.454	ENSPTIG00000014829	APEX1	88	72.760	Panthera_tigris_altaica
ENSPLAG00000012779	apex1	99	66.772	ENSPTRG00000006093	APEX1	89	71.685	Pan_troglodytes
ENSPLAG00000012779	apex1	99	66.456	ENSPANG00000022757	APEX1	88	71.326	Papio_anubis
ENSPLAG00000012779	apex1	89	87.319	ENSPKIG00000003504	apex1	99	84.295	Paramormyrops_kingsleyae
ENSPLAG00000012779	apex1	86	77.903	ENSPMGG00000016596	apex1	78	77.903	Periophthalmus_magnuspinnatus
ENSPLAG00000012779	apex1	99	66.349	ENSPEMG00000019097	Apex1	88	71.685	Peromyscus_maniculatus_bairdii
ENSPLAG00000012779	apex1	93	71.478	ENSPMAG00000007275	-	95	72.760	Petromyzon_marinus
ENSPLAG00000012779	apex1	90	69.534	ENSPCIG00000023274	APEX1	87	69.534	Phascolarctos_cinereus
ENSPLAG00000012779	apex1	100	98.387	ENSPFOG00000004178	apex1	100	98.387	Poecilia_formosa
ENSPLAG00000012779	apex1	100	98.387	ENSPMEG00000019623	apex1	100	98.387	Poecilia_mexicana
ENSPLAG00000012779	apex1	100	95.806	ENSPREG00000014298	apex1	99	95.806	Poecilia_reticulata
ENSPLAG00000012779	apex1	99	66.456	ENSPPYG00000005565	APEX1	88	71.326	Pongo_abelii
ENSPLAG00000012779	apex1	99	64.873	ENSPCAG00000010376	APEX1	88	70.251	Procavia_capensis
ENSPLAG00000012779	apex1	99	67.089	ENSPCOG00000021564	APEX1	99	67.089	Propithecus_coquereli
ENSPLAG00000012779	apex1	99	66.981	ENSPVAG00000010736	APEX1	87	72.043	Pteropus_vampyrus
ENSPLAG00000012779	apex1	100	91.613	ENSPNYG00000023940	apex1	100	91.613	Pundamilia_nyererei
ENSPLAG00000012779	apex1	92	86.014	ENSPNAG00000020897	apex1	96	85.965	Pygocentrus_nattereri
ENSPLAG00000012779	apex1	99	66.984	ENSRNOG00000009663	Apex1	88	72.401	Rattus_norvegicus
ENSPLAG00000012779	apex1	99	66.772	ENSRBIG00000038325	APEX1	87	71.685	Rhinopithecus_bieti
ENSPLAG00000012779	apex1	99	60.000	ENSSBOG00000031372	-	91	63.082	Saimiri_boliviensis_boliviensis
ENSPLAG00000012779	apex1	90	72.401	ENSSBOG00000018921	-	88	72.401	Saimiri_boliviensis_boliviensis
ENSPLAG00000012779	apex1	100	63.376	ENSSHAG00000013524	APEX1	87	68.794	Sarcophilus_harrisii
ENSPLAG00000012779	apex1	99	80.323	ENSSFOG00015001948	apex1	99	82.581	Scleropages_formosus
ENSPLAG00000012779	apex1	100	86.032	ENSSMAG00000013348	apex1	100	86.667	Scophthalmus_maximus
ENSPLAG00000012779	apex1	100	90.968	ENSSDUG00000016377	apex1	99	90.968	Seriola_dumerili
ENSPLAG00000012779	apex1	100	90.968	ENSSLDG00000023005	apex1	100	90.968	Seriola_lalandi_dorsalis
ENSPLAG00000012779	apex1	90	72.857	ENSSPUG00000000531	APEX1	94	72.760	Sphenodon_punctatus
ENSPLAG00000012779	apex1	100	89.032	ENSSPAG00000000458	apex1	100	89.032	Stegastes_partitus
ENSPLAG00000012779	apex1	95	40.264	ENSSSCG00000039705	-	86	42.322	Sus_scrofa
ENSPLAG00000012779	apex1	99	67.405	ENSSSCG00000040060	-	99	67.405	Sus_scrofa
ENSPLAG00000012779	apex1	76	58.723	ENSTGUG00000014378	APEX1	100	58.723	Taeniopygia_guttata
ENSPLAG00000012779	apex1	100	82.748	ENSTRUG00000004268	apex1	95	84.026	Takifugu_rubripes
ENSPLAG00000012779	apex1	100	84.194	ENSTNIG00000005778	apex1	100	84.194	Tetraodon_nigroviridis
ENSPLAG00000012779	apex1	99	63.924	ENSTBEG00000006405	APEX1	88	68.817	Tupaia_belangeri
ENSPLAG00000012779	apex1	76	71.489	ENSTTRG00000007860	APEX1	100	71.489	Tursiops_truncatus
ENSPLAG00000012779	apex1	99	67.823	ENSUAMG00000010457	APEX1	88	72.043	Ursus_americanus
ENSPLAG00000012779	apex1	99	67.823	ENSUMAG00000009178	APEX1	88	72.043	Ursus_maritimus
ENSPLAG00000012779	apex1	76	66.809	ENSVPAG00000005083	APEX1	100	66.809	Vicugna_pacos
ENSPLAG00000012779	apex1	99	67.508	ENSVVUG00000009010	APEX1	99	67.508	Vulpes_vulpes
ENSPLAG00000012779	apex1	99	68.153	ENSXETG00000024773	apex1	99	67.516	Xenopus_tropicalis
ENSPLAG00000012779	apex1	100	97.742	ENSXCOG00000015233	apex1	99	97.742	Xiphophorus_couchianus
ENSPLAG00000012779	apex1	100	97.742	ENSXMAG00000006195	apex1	100	97.742	Xiphophorus_maculatus