EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000012816 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: -
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 7900 bases
Position: chrKQ545901.1:158302-166201
Accession: 106953519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000025632	Fox-1_C	PF12414.8	1e-21	1	1
ENSPLAP00000025632	RRM_1	PF00076.22	6.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000000332	-	924	XM_015042347	ENSPLAP00000025632	307 (aa)	XP_014897833	-

Gene Model

Click here to download ENSPLAG00000012816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000012816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000012816	rbfox1l	63	52.174	ENSPLAG00000002710	-	95	53.043
ENSPLAG00000012816	rbfox1l	72	67.265	ENSPLAG00000000481	rbfox3b	68	67.265
ENSPLAG00000012816	rbfox1l	63	53.778	ENSPLAG00000017308	rbfox2	95	54.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000012816	rbfox1l	99	81.957	ENSAPOG00000016304	rbfox1l	86	82.263	Acanthochromis_polyacanthus
ENSPLAG00000012816	rbfox1l	99	80.317	ENSACIG00000006441	rbfox1l	84	80.317	Amphilophus_citrinellus
ENSPLAG00000012816	rbfox1l	92	80.000	ENSAOCG00000020938	rbfox1l	96	80.892	Amphiprion_ocellaris
ENSPLAG00000012816	rbfox1l	99	81.957	ENSAPEG00000008232	rbfox1l	85	82.263	Amphiprion_percula
ENSPLAG00000012816	rbfox1l	93	76.645	ENSATEG00000022649	rbfox1l	85	77.709	Anabas_testudineus
ENSPLAG00000012816	rbfox1l	72	62.500	ENSACAG00000011931	-	86	63.333	Anolis_carolinensis
ENSPLAG00000012816	rbfox1l	99	79.817	ENSACLG00000021394	rbfox1l	85	79.817	Astatotilapia_calliptera
ENSPLAG00000012816	rbfox1l	99	76.061	ENSAMXG00000010470	rbfox1l	85	76.364	Astyanax_mexicanus
ENSPLAG00000012816	rbfox1l	73	61.506	ENSCPBG00000010944	-	71	59.091	Chrysemys_picta_bellii
ENSPLAG00000012816	rbfox1l	99	77.439	ENSCSEG00000018898	rbfox1l	85	77.439	Cynoglossus_semilaevis
ENSPLAG00000012816	rbfox1l	99	83.792	ENSCVAG00000007986	rbfox1l	85	83.792	Cyprinodon_variegatus
ENSPLAG00000012816	rbfox1l	99	75.152	ENSDARG00000021184	rbfox1l	85	75.152	Danio_rerio
ENSPLAG00000012816	rbfox1l	99	67.953	ENSELUG00000015077	rbfox1l	88	74.777	Esox_lucius
ENSPLAG00000012816	rbfox1l	99	71.019	ENSFHEG00000016557	rbfox1l	82	71.019	Fundulus_heteroclitus
ENSPLAG00000012816	rbfox1l	99	74.540	ENSGMOG00000005040	rbfox1l	86	74.540	Gadus_morhua
ENSPLAG00000012816	rbfox1l	99	87.692	ENSGAFG00000013211	rbfox1l	90	87.692	Gambusia_affinis
ENSPLAG00000012816	rbfox1l	99	78.593	ENSGACG00000010757	rbfox1l	85	78.593	Gasterosteus_aculeatus
ENSPLAG00000012816	rbfox1l	73	61.925	ENSGAGG00000012440	-	83	64.583	Gopherus_agassizii
ENSPLAG00000012816	rbfox1l	99	79.817	ENSHBUG00000013406	rbfox1l	85	79.817	Haplochromis_burtoni
ENSPLAG00000012816	rbfox1l	99	77.134	ENSHCOG00000020771	rbfox1l	88	77.134	Hippocampus_comes
ENSPLAG00000012816	rbfox1l	91	70.684	ENSIPUG00000000065	rbfox1l	92	72.508	Ictalurus_punctatus
ENSPLAG00000012816	rbfox1l	90	81.000	ENSKMAG00000005146	rbfox1l	85	81.155	Kryptolebias_marmoratus
ENSPLAG00000012816	rbfox1l	99	81.040	ENSLBEG00000017089	rbfox1l	85	81.040	Labrus_bergylta
ENSPLAG00000012816	rbfox1l	92	80.392	ENSMAMG00000019480	rbfox1l	85	80.734	Mastacembelus_armatus
ENSPLAG00000012816	rbfox1l	99	79.817	ENSMZEG00005016374	rbfox1l	85	79.817	Maylandia_zebra
ENSPLAG00000012816	rbfox1l	99	77.676	ENSMMOG00000016530	rbfox1l	85	77.676	Mola_mola
ENSPLAG00000012816	rbfox1l	98	77.607	ENSMALG00000009384	rbfox1l	84	79.487	Monopterus_albus
ENSPLAG00000012816	rbfox1l	99	78.593	ENSNBRG00000003346	rbfox1l	85	78.593	Neolamprologus_brichardi
ENSPLAG00000012816	rbfox1l	99	80.428	ENSONIG00000012754	rbfox1l	85	80.428	Oreochromis_niloticus
ENSPLAG00000012816	rbfox1l	94	79.553	ENSORLG00000011269	rbfox1l	86	80.122	Oryzias_latipes
ENSPLAG00000012816	rbfox1l	94	80.192	ENSORLG00020000162	rbfox1l	88	81.040	Oryzias_latipes_hni
ENSPLAG00000012816	rbfox1l	94	80.128	ENSORLG00015013464	rbfox1l	85	80.734	Oryzias_latipes_hsok
ENSPLAG00000012816	rbfox1l	92	81.046	ENSOMEG00000010584	rbfox1l	85	81.346	Oryzias_melastigma
ENSPLAG00000012816	rbfox1l	99	77.134	ENSPKIG00000012029	rbfox1l	85	77.134	Paramormyrops_kingsleyae
ENSPLAG00000012816	rbfox1l	99	72.086	ENSPMGG00000012082	rbfox1l	85	73.620	Periophthalmus_magnuspinnatus
ENSPLAG00000012816	rbfox1l	99	88.615	ENSPFOG00000009338	rbfox1l	85	88.615	Poecilia_formosa
ENSPLAG00000012816	rbfox1l	99	87.261	ENSPMEG00000017597	rbfox1l	85	87.261	Poecilia_mexicana
ENSPLAG00000012816	rbfox1l	99	86.943	ENSPREG00000007940	rbfox1l	85	86.943	Poecilia_reticulata
ENSPLAG00000012816	rbfox1l	99	80.122	ENSPNYG00000002098	rbfox1l	85	80.122	Pundamilia_nyererei
ENSPLAG00000012816	rbfox1l	99	72.810	ENSPNAG00000001620	rbfox1l	85	75.831	Pygocentrus_nattereri
ENSPLAG00000012816	rbfox1l	99	73.556	ENSSFOG00015000675	rbfox1l	88	73.556	Scleropages_formosus
ENSPLAG00000012816	rbfox1l	99	80.061	ENSSMAG00000013090	rbfox1l	88	80.061	Scophthalmus_maximus
ENSPLAG00000012816	rbfox1l	99	75.976	ENSSDUG00000008705	rbfox1l	85	75.976	Seriola_dumerili
ENSPLAG00000012816	rbfox1l	99	76.506	ENSSLDG00000022256	rbfox1l	85	76.506	Seriola_lalandi_dorsalis
ENSPLAG00000012816	rbfox1l	92	80.719	ENSSPAG00000016620	rbfox1l	85	81.346	Stegastes_partitus
ENSPLAG00000012816	rbfox1l	98	75.309	ENSTRUG00000015905	rbfox1l	88	75.617	Takifugu_rubripes
ENSPLAG00000012816	rbfox1l	73	71.595	ENSTNIG00000008088	rbfox1l	95	73.541	Tetraodon_nigroviridis
ENSPLAG00000012816	rbfox1l	99	88.615	ENSXMAG00000023471	rbfox1l	85	88.615	Xiphophorus_maculatus