EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000013457 (Gene tree)
Gene ID: 106945030
Gene Symbol: cnot3b
Alias: -
Full Name: CCR4-NOT transcription complex subunit 3-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 29538 bases
Position: chrKQ545439.1:326102-355639
Accession: 106945030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000010477	Not3	PF04065.15	1.3e-94	1	1
ENSPLAP00000025990	Not3	PF04065.15	1.3e-94	1	1
ENSPLAP00000025990	NOT2_3_5	PF04153.18	1.5e-40	1	1
ENSPLAP00000010477	NOT2_3_5	PF04153.18	9.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000017595	-	2607	-	ENSPLAP00000010477	868 (aa)	-	-
ENSPLAT00000028833	-	6342	XM_015028429	ENSPLAP00000025990	905 (aa)	XP_014883915	UPI0004448D4E

Gene Model

Click here to download ENSPLAG00000013457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000013457's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000013457	cnot3b	100	64.409	ENSPLAG00000013324	cnot3a	100	63.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000013457	cnot3b	75	73.858	ENSG00000088038	CNOT3	100	93.814	Homo_sapiens
ENSPLAG00000013457	cnot3b	57	78.853	ENSAPOG00000015499	CNOT3	92	77.419	Acanthochromis_polyacanthus
ENSPLAG00000013457	cnot3b	65	93.151	ENSAPOG00000015002	cnot3b	94	93.151	Acanthochromis_polyacanthus
ENSPLAG00000013457	cnot3b	69	89.145	ENSAMEG00000004528	CNOT3	95	83.279	Ailuropoda_melanoleuca
ENSPLAG00000013457	cnot3b	67	93.304	ENSACIG00000003652	cnot3b	99	94.545	Amphilophus_citrinellus
ENSPLAG00000013457	cnot3b	67	89.700	ENSACIG00000006635	cnot3a	93	91.441	Amphilophus_citrinellus
ENSPLAG00000013457	cnot3b	97	75.556	ENSAOCG00000018385	-	98	80.451	Amphiprion_ocellaris
ENSPLAG00000013457	cnot3b	97	77.248	ENSAPEG00000002640	cnot3b	98	95.960	Amphiprion_percula
ENSPLAG00000013457	cnot3b	100	65.310	ENSATEG00000022737	cnot3a	100	65.291	Anabas_testudineus
ENSPLAG00000013457	cnot3b	100	82.818	ENSATEG00000015777	cnot3b	100	81.750	Anabas_testudineus
ENSPLAG00000013457	cnot3b	63	88.599	ENSACAG00000016085	CNOT3	96	83.553	Anolis_carolinensis
ENSPLAG00000013457	cnot3b	75	74.365	ENSANAG00000025756	CNOT3	95	83.607	Aotus_nancymaae
ENSPLAG00000013457	cnot3b	100	80.753	ENSACLG00000016702	cnot3b	100	79.699	Astatotilapia_calliptera
ENSPLAG00000013457	cnot3b	100	67.364	ENSAMXG00000009447	cnot3b	97	90.323	Astyanax_mexicanus
ENSPLAG00000013457	cnot3b	100	67.527	ENSAMXG00000012359	cnot3a	100	67.777	Astyanax_mexicanus
ENSPLAG00000013457	cnot3b	68	89.474	ENSBTAG00000014900	CNOT3	97	89.180	Bos_taurus
ENSPLAG00000013457	cnot3b	75	74.365	ENSCJAG00000001094	CNOT3	95	83.607	Callithrix_jacchus
ENSPLAG00000013457	cnot3b	75	73.858	ENSCAFG00000002699	CNOT3	95	83.607	Canis_familiaris
ENSPLAG00000013457	cnot3b	75	73.858	ENSCAFG00020018359	CNOT3	95	83.607	Canis_lupus_dingo
ENSPLAG00000013457	cnot3b	62	87.459	ENSCHIG00000015302	CNOT3	93	81.579	Capra_hircus
ENSPLAG00000013457	cnot3b	66	83.882	ENSTSYG00000008058	CNOT3	95	83.607	Carlito_syrichta
ENSPLAG00000013457	cnot3b	73	80.282	ENSCAPG00000009533	CNOT3	93	83.607	Cavia_aperea
ENSPLAG00000013457	cnot3b	89	72.573	ENSCPOG00000020741	CNOT3	93	83.607	Cavia_porcellus
ENSPLAG00000013457	cnot3b	75	74.112	ENSCCAG00000036290	CNOT3	95	83.607	Cebus_capucinus
ENSPLAG00000013457	cnot3b	75	73.858	ENSCATG00000030324	CNOT3	95	83.607	Cercocebus_atys
ENSPLAG00000013457	cnot3b	82	80.282	ENSCLAG00000003302	CNOT3	98	89.180	Chinchilla_lanigera
ENSPLAG00000013457	cnot3b	75	74.112	ENSCSAG00000001900	CNOT3	95	83.607	Chlorocebus_sabaeus
ENSPLAG00000013457	cnot3b	93	64.052	ENSCPBG00000011655	CNOT3	88	89.836	Chrysemys_picta_bellii
ENSPLAG00000013457	cnot3b	81	56.508	ENSCING00000000293	-	71	70.270	Ciona_intestinalis
ENSPLAG00000013457	cnot3b	75	73.858	ENSCANG00000013408	CNOT3	95	83.607	Colobus_angolensis_palliatus
ENSPLAG00000013457	cnot3b	84	70.588	ENSCGRG00001000855	Cnot3	95	83.934	Cricetulus_griseus_chok1gshd
ENSPLAG00000013457	cnot3b	90	81.900	ENSCSEG00000016892	cnot3b	100	74.046	Cynoglossus_semilaevis
ENSPLAG00000013457	cnot3b	100	63.285	ENSCSEG00000003574	cnot3a	100	65.021	Cynoglossus_semilaevis
ENSPLAG00000013457	cnot3b	100	90.969	ENSCVAG00000022122	cnot3b	100	90.198	Cyprinodon_variegatus
ENSPLAG00000013457	cnot3b	100	65.547	ENSDARG00000007135	cnot3a	100	67.606	Danio_rerio
ENSPLAG00000013457	cnot3b	100	69.717	ENSDARG00000019842	cnot3b	100	70.217	Danio_rerio
ENSPLAG00000013457	cnot3b	68	89.145	ENSDNOG00000045972	CNOT3	99	88.852	Dasypus_novemcinctus
ENSPLAG00000013457	cnot3b	68	89.474	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSPLAG00000013457	cnot3b	52	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSPLAG00000013457	cnot3b	67	69.805	ENSEBUG00000010437	cnot3a	84	72.093	Eptatretus_burgeri
ENSPLAG00000013457	cnot3b	75	74.112	ENSEASG00005021591	CNOT3	95	83.607	Equus_asinus_asinus
ENSPLAG00000013457	cnot3b	75	74.112	ENSECAG00000023181	CNOT3	99	83.882	Equus_caballus
ENSPLAG00000013457	cnot3b	100	62.120	ENSELUG00000014743	cnot3a	100	63.299	Esox_lucius
ENSPLAG00000013457	cnot3b	100	71.609	ENSELUG00000000953	cnot3b	100	73.284	Esox_lucius
ENSPLAG00000013457	cnot3b	80	74.619	ENSFCAG00000014042	CNOT3	95	83.607	Felis_catus
ENSPLAG00000013457	cnot3b	100	62.995	ENSFHEG00000023166	cnot3a	76	91.892	Fundulus_heteroclitus
ENSPLAG00000013457	cnot3b	100	89.869	ENSFHEG00000001696	cnot3b	100	89.651	Fundulus_heteroclitus
ENSPLAG00000013457	cnot3b	94	60.596	ENSGMOG00000005365	cnot3a	98	62.273	Gadus_morhua
ENSPLAG00000013457	cnot3b	100	96.796	ENSGAFG00000003459	cnot3b	100	96.796	Gambusia_affinis
ENSPLAG00000013457	cnot3b	68	87.234	ENSGACG00000009395	cnot3b	82	87.234	Gasterosteus_aculeatus
ENSPLAG00000013457	cnot3b	82	68.750	ENSGAGG00000012677	CNOT3	87	87.156	Gopherus_agassizii
ENSPLAG00000013457	cnot3b	75	73.858	ENSGGOG00000012996	CNOT3	99	89.180	Gorilla_gorilla
ENSPLAG00000013457	cnot3b	99	71.970	ENSHBUG00000019699	cnot3b	99	72.108	Haplochromis_burtoni
ENSPLAG00000013457	cnot3b	68	89.474	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSPLAG00000013457	cnot3b	60	81.226	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSPLAG00000013457	cnot3b	100	60.965	ENSIPUG00000000167	cnot3	100	62.378	Ictalurus_punctatus
ENSPLAG00000013457	cnot3b	100	65.521	ENSIPUG00000009046	cnot3b	100	65.686	Ictalurus_punctatus
ENSPLAG00000013457	cnot3b	68	89.474	ENSSTOG00000028248	CNOT3	95	83.607	Ictidomys_tridecemlineatus
ENSPLAG00000013457	cnot3b	78	74.619	ENSJJAG00000014594	Cnot3	99	89.508	Jaculus_jaculus
ENSPLAG00000013457	cnot3b	100	62.683	ENSKMAG00000004863	cnot3a	100	79.208	Kryptolebias_marmoratus
ENSPLAG00000013457	cnot3b	100	85.342	ENSKMAG00000018723	cnot3b	100	85.466	Kryptolebias_marmoratus
ENSPLAG00000013457	cnot3b	67	86.429	ENSLBEG00000017296	cnot3a	96	84.615	Labrus_bergylta
ENSPLAG00000013457	cnot3b	96	79.821	ENSLBEG00000018278	cnot3b	99	79.619	Labrus_bergylta
ENSPLAG00000013457	cnot3b	68	90.132	ENSLACG00000009742	CNOT3	98	89.836	Latimeria_chalumnae
ENSPLAG00000013457	cnot3b	54	92.857	ENSLOCG00000000005	cnot3b	79	92.857	Lepisosteus_oculatus
ENSPLAG00000013457	cnot3b	75	73.671	ENSLAFG00000022133	CNOT3	95	82.680	Loxodonta_africana
ENSPLAG00000013457	cnot3b	82	69.543	ENSMFAG00000040073	CNOT3	95	83.607	Macaca_fascicularis
ENSPLAG00000013457	cnot3b	60	89.076	ENSMMUG00000009698	CNOT3	100	99.020	Macaca_mulatta
ENSPLAG00000013457	cnot3b	75	73.858	ENSMNEG00000036750	CNOT3	95	83.607	Macaca_nemestrina
ENSPLAG00000013457	cnot3b	75	73.858	ENSMLEG00000036579	CNOT3	99	83.607	Mandrillus_leucophaeus
ENSPLAG00000013457	cnot3b	100	83.494	ENSMAMG00000019357	cnot3b	100	82.208	Mastacembelus_armatus
ENSPLAG00000013457	cnot3b	100	81.338	ENSMZEG00005002466	cnot3b	100	80.496	Maylandia_zebra
ENSPLAG00000013457	cnot3b	84	70.305	ENSMAUG00000014996	Cnot3	95	83.934	Mesocricetus_auratus
ENSPLAG00000013457	cnot3b	70	85.276	ENSMICG00000002370	CNOT3	97	89.474	Microcebus_murinus
ENSPLAG00000013457	cnot3b	70	90.129	ENSMMOG00000013086	cnot3b	98	91.892	Mola_mola
ENSPLAG00000013457	cnot3b	100	63.085	ENSMMOG00000016446	cnot3a	100	64.423	Mola_mola
ENSPLAG00000013457	cnot3b	60	88.816	ENSMODG00000004066	CNOT3	74	88.525	Monodelphis_domestica
ENSPLAG00000013457	cnot3b	100	64.568	ENSMALG00000009204	cnot3a	100	65.598	Monopterus_albus
ENSPLAG00000013457	cnot3b	59	89.130	ENSMALG00000004936	cnot3b	77	88.889	Monopterus_albus
ENSPLAG00000013457	cnot3b	75	74.425	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSPLAG00000013457	cnot3b	75	74.425	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSPLAG00000013457	cnot3b	75	74.425	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSPLAG00000013457	cnot3b	75	74.425	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSPLAG00000013457	cnot3b	73	89.474	ENSMPUG00000010352	CNOT3	93	83.607	Mustela_putorius_furo
ENSPLAG00000013457	cnot3b	88	63.158	ENSNGAG00000013266	Cnot3	99	89.180	Nannospalax_galili
ENSPLAG00000013457	cnot3b	88	80.597	ENSNBRG00000003336	cnot3b	97	89.720	Neolamprologus_brichardi
ENSPLAG00000013457	cnot3b	75	73.858	ENSNLEG00000006272	CNOT3	95	83.882	Nomascus_leucogenys
ENSPLAG00000013457	cnot3b	51	100.000	ENSMEUG00000002952	CNOT3	68	100.000	Notamacropus_eugenii
ENSPLAG00000013457	cnot3b	86	75.775	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSPLAG00000013457	cnot3b	100	82.289	ENSONIG00000007047	cnot3b	100	81.425	Oreochromis_niloticus
ENSPLAG00000013457	cnot3b	100	64.169	ENSONIG00000006568	cnot3a	100	66.414	Oreochromis_niloticus
ENSPLAG00000013457	cnot3b	85	74.619	ENSOCUG00000007691	CNOT3	95	83.607	Oryctolagus_cuniculus
ENSPLAG00000013457	cnot3b	100	81.976	ENSORLG00000005982	cnot3b	100	81.352	Oryzias_latipes
ENSPLAG00000013457	cnot3b	100	82.085	ENSORLG00020005779	cnot3b	100	81.481	Oryzias_latipes_hni
ENSPLAG00000013457	cnot3b	100	81.514	ENSORLG00015019021	cnot3b	100	81.020	Oryzias_latipes_hsok
ENSPLAG00000013457	cnot3b	57	85.816	ENSOMEG00000010309	cnot3a	100	64.873	Oryzias_melastigma
ENSPLAG00000013457	cnot3b	100	82.661	ENSOMEG00000015557	cnot3b	100	81.659	Oryzias_melastigma
ENSPLAG00000013457	cnot3b	84	70.886	ENSOGAG00000006945	CNOT3	95	83.882	Otolemur_garnettii
ENSPLAG00000013457	cnot3b	63	64.610	ENSOARG00000002981	CNOT3	69	82.775	Ovis_aries
ENSPLAG00000013457	cnot3b	75	73.858	ENSPPAG00000002748	CNOT3	95	83.607	Pan_paniscus
ENSPLAG00000013457	cnot3b	80	74.619	ENSPPRG00000011705	CNOT3	95	83.607	Panthera_pardus
ENSPLAG00000013457	cnot3b	62	89.597	ENSPTIG00000008781	CNOT3	96	89.597	Panthera_tigris_altaica
ENSPLAG00000013457	cnot3b	75	73.858	ENSPTRG00000011444	CNOT3	95	83.607	Pan_troglodytes
ENSPLAG00000013457	cnot3b	75	73.858	ENSPTRG00000046717	-	95	83.607	Pan_troglodytes
ENSPLAG00000013457	cnot3b	75	73.858	ENSPANG00000009375	CNOT3	95	83.607	Papio_anubis
ENSPLAG00000013457	cnot3b	100	63.816	ENSPKIG00000011733	CNOT3	100	63.180	Paramormyrops_kingsleyae
ENSPLAG00000013457	cnot3b	97	64.286	ENSPKIG00000015967	-	97	94.595	Paramormyrops_kingsleyae
ENSPLAG00000013457	cnot3b	98	68.197	ENSPMGG00000022539	cnot3b	99	68.018	Periophthalmus_magnuspinnatus
ENSPLAG00000013457	cnot3b	82	72.074	ENSPEMG00000024185	Cnot3	95	83.934	Peromyscus_maniculatus_bairdii
ENSPLAG00000013457	cnot3b	68	89.145	ENSPCIG00000023018	CNOT3	90	88.852	Phascolarctos_cinereus
ENSPLAG00000013457	cnot3b	100	100.000	ENSPFOG00000007168	cnot3b	100	100.000	Poecilia_formosa
ENSPLAG00000013457	cnot3b	75	86.093	ENSPFOG00000008693	cnot3a	99	84.295	Poecilia_formosa
ENSPLAG00000013457	cnot3b	100	99.669	ENSPMEG00000010184	cnot3b	100	99.669	Poecilia_mexicana
ENSPLAG00000013457	cnot3b	99	93.386	ENSPREG00000000662	cnot3b	97	93.386	Poecilia_reticulata
ENSPLAG00000013457	cnot3b	65	85.484	ENSPREG00000007592	cnot3a	95	85.484	Poecilia_reticulata
ENSPLAG00000013457	cnot3b	51	96.514	ENSPREG00000000766	-	100	96.514	Poecilia_reticulata
ENSPLAG00000013457	cnot3b	75	73.604	ENSPPYG00000010372	CNOT3	95	83.279	Pongo_abelii
ENSPLAG00000013457	cnot3b	54	95.763	ENSPCAG00000011999	CNOT3	56	95.763	Procavia_capensis
ENSPLAG00000013457	cnot3b	75	74.619	ENSPCOG00000017673	CNOT3	97	89.180	Propithecus_coquereli
ENSPLAG00000013457	cnot3b	75	73.604	ENSPVAG00000015564	CNOT3	93	82.951	Pteropus_vampyrus
ENSPLAG00000013457	cnot3b	99	72.108	ENSPNYG00000003358	cnot3b	99	72.108	Pundamilia_nyererei
ENSPLAG00000013457	cnot3b	77	80.986	ENSPNAG00000017679	cnot3a	100	66.738	Pygocentrus_nattereri
ENSPLAG00000013457	cnot3b	100	71.087	ENSPNAG00000027459	cnot3b	100	71.522	Pygocentrus_nattereri
ENSPLAG00000013457	cnot3b	75	74.425	ENSRNOG00000053234	Cnot3	95	83.934	Rattus_norvegicus
ENSPLAG00000013457	cnot3b	75	74.365	ENSRBIG00000031025	CNOT3	95	83.607	Rhinopithecus_bieti
ENSPLAG00000013457	cnot3b	75	74.619	ENSRROG00000003872	CNOT3	95	83.607	Rhinopithecus_roxellana
ENSPLAG00000013457	cnot3b	76	73.504	ENSSBOG00000030268	CNOT3	95	83.607	Saimiri_boliviensis_boliviensis
ENSPLAG00000013457	cnot3b	100	70.174	ENSSFOG00015000248	cnot3	100	70.499	Scleropages_formosus
ENSPLAG00000013457	cnot3b	100	68.030	ENSSFOG00015019203	-	100	69.364	Scleropages_formosus
ENSPLAG00000013457	cnot3b	100	79.979	ENSSMAG00000016031	cnot3b	100	79.787	Scophthalmus_maximus
ENSPLAG00000013457	cnot3b	81	90.129	ENSSDUG00000008181	cnot3a	96	91.892	Seriola_dumerili
ENSPLAG00000013457	cnot3b	100	83.333	ENSSDUG00000003428	cnot3b	100	82.692	Seriola_dumerili
ENSPLAG00000013457	cnot3b	100	83.333	ENSSLDG00000014376	cnot3b	100	82.692	Seriola_lalandi_dorsalis
ENSPLAG00000013457	cnot3b	77	74.065	ENSSPUG00000008510	CNOT3	89	89.180	Sphenodon_punctatus
ENSPLAG00000013457	cnot3b	80	82.432	ENSSPAG00000003858	cnot3a	92	86.220	Stegastes_partitus
ENSPLAG00000013457	cnot3b	100	84.318	ENSSPAG00000001429	cnot3b	100	84.211	Stegastes_partitus
ENSPLAG00000013457	cnot3b	75	74.112	ENSSSCG00000003264	CNOT3	99	83.882	Sus_scrofa
ENSPLAG00000013457	cnot3b	96	89.308	ENSTRUG00000007248	cnot3b	91	91.099	Takifugu_rubripes
ENSPLAG00000013457	cnot3b	100	64.387	ENSTRUG00000015732	cnot3a	100	65.106	Takifugu_rubripes
ENSPLAG00000013457	cnot3b	94	74.456	ENSTNIG00000005663	cnot3b	100	74.138	Tetraodon_nigroviridis
ENSPLAG00000013457	cnot3b	69	89.145	ENSUAMG00000005234	CNOT3	95	83.279	Ursus_americanus
ENSPLAG00000013457	cnot3b	70	87.455	ENSUMAG00000010934	CNOT3	94	87.402	Ursus_maritimus
ENSPLAG00000013457	cnot3b	75	73.858	ENSVVUG00000008239	CNOT3	99	83.607	Vulpes_vulpes
ENSPLAG00000013457	cnot3b	100	58.969	ENSXETG00000003166	cnot3	88	88.350	Xenopus_tropicalis
ENSPLAG00000013457	cnot3b	100	60.753	ENSXCOG00000019460	cnot3a	92	91.441	Xiphophorus_couchianus
ENSPLAG00000013457	cnot3b	96	93.582	ENSXCOG00000018976	cnot3b	100	93.816	Xiphophorus_couchianus
ENSPLAG00000013457	cnot3b	100	62.675	ENSXMAG00000012273	cnot3a	100	64.612	Xiphophorus_maculatus
ENSPLAG00000013457	cnot3b	100	98.015	ENSXMAG00000014176	cnot3b	100	98.015	Xiphophorus_maculatus