EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000013476 (Gene tree)
Gene ID: 106945027
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC106945027
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4164 bases
Position: chrKQ545439.1:265504-269667
Accession: 106945027
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000010548	zf-C2H2	PF00096.26	1.3e-35	1	6
ENSPLAP00000010548	zf-C2H2	PF00096.26	1.3e-35	2	6
ENSPLAP00000010548	zf-C2H2	PF00096.26	1.3e-35	3	6
ENSPLAP00000010548	zf-C2H2	PF00096.26	1.3e-35	4	6
ENSPLAP00000010548	zf-C2H2	PF00096.26	1.3e-35	5	6
ENSPLAP00000010548	zf-C2H2	PF00096.26	1.3e-35	6	6
ENSPLAP00000010548	zf-met	PF12874.7	1e-07	1	2
ENSPLAP00000010548	zf-met	PF12874.7	1e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000028852	-	4164	XM_015028421	ENSPLAP00000010548	1387 (aa)	XP_014883907	UPI000443B9DC

Gene Model

Click here to download ENSPLAG00000013476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000013476's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000013476	-	63	85.552	ENSAPOG00000014819	-	99	88.287	Acanthochromis_polyacanthus
ENSPLAG00000013476	-	59	91.566	ENSAOCG00000022926	-	97	98.013	Amphiprion_ocellaris
ENSPLAG00000013476	-	98	77.422	ENSCSEG00000016863	-	99	76.861	Cynoglossus_semilaevis
ENSPLAG00000013476	-	100	87.885	ENSCVAG00000022101	-	100	88.817	Cyprinodon_variegatus
ENSPLAG00000013476	-	100	91.960	ENSFHEG00000001706	-	100	91.888	Fundulus_heteroclitus
ENSPLAG00000013476	-	99	71.183	ENSHCOG00000018630	-	99	71.102	Hippocampus_comes
ENSPLAG00000013476	-	65	84.875	ENSKMAG00000018789	-	100	84.382	Kryptolebias_marmoratus
ENSPLAG00000013476	-	63	83.768	ENSMMOG00000013085	-	100	83.817	Mola_mola
ENSPLAG00000013476	-	100	83.691	ENSONIG00000007045	-	100	91.414	Oreochromis_niloticus
ENSPLAG00000013476	-	100	78.736	ENSORLG00015019057	-	100	78.505	Oryzias_latipes_hsok
ENSPLAG00000013476	-	74	58.654	ENSPKIG00000012449	si:dkeyp-69b9.6	82	57.033	Paramormyrops_kingsleyae
ENSPLAG00000013476	-	97	95.759	ENSPFOG00000007425	-	100	95.759	Poecilia_formosa
ENSPLAG00000013476	-	100	95.530	ENSPMEG00000010070	-	100	95.530	Poecilia_mexicana
ENSPLAG00000013476	-	87	55.391	ENSSFOG00015000866	si:dkeyp-69b9.6	82	50.274	Scleropages_formosus
ENSPLAG00000013476	-	65	81.148	ENSSMAG00000016019	-	100	82.528	Scophthalmus_maximus
ENSPLAG00000013476	-	61	92.623	ENSSPAG00000001452	-	99	96.721	Stegastes_partitus