EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000013524 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4813 bases
Position: chrKQ546129.1:321225-326037
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000010571	RRM_1	PF00076.22	2.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000017703	-	375	-	ENSPLAP00000010571	124 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000013524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000013524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000013524	-	86	40.698	ENSPLAG00000001547	elavl3	68	40.698
ENSPLAG00000013524	-	68	44.444	ENSPLAG00000008127	elavl1a	65	44.444
ENSPLAG00000013524	-	74	93.478	ENSPLAG00000015969	-	75	93.478
ENSPLAG00000013524	-	74	93.478	ENSPLAG00000000224	-	75	93.478
ENSPLAG00000013524	-	67	47.436	ENSPLAG00000020810	ELAVL1	70	46.914
ENSPLAG00000013524	-	68	40.741	ENSPLAG00000005203	ELAVL2	63	40.741
ENSPLAG00000013524	-	68	39.506	ENSPLAG00000008085	elavl4	62	39.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000013524	-	96	99.160	ENSAMXG00000034719	-	96	99.160	Astyanax_mexicanus
ENSPLAG00000013524	-	73	91.111	ENSBTAG00000051439	-	57	91.111	Bos_taurus
ENSPLAG00000013524	-	96	78.151	ENSCHIG00000009150	-	75	89.130	Capra_hircus
ENSPLAG00000013524	-	74	93.478	ENSCVAG00000018670	si:dkey-205h23.2	52	84.167	Cyprinodon_variegatus
ENSPLAG00000013524	-	98	77.049	ENSECAG00000036983	-	92	75.410	Equus_caballus
ENSPLAG00000013524	-	73	95.556	ENSGALG00000048972	-	83	95.556	Gallus_gallus
ENSPLAG00000013524	-	77	57.292	ENSNBRG00000010123	-	75	62.500	Neolamprologus_brichardi
ENSPLAG00000013524	-	56	92.754	ENSOANG00000031583	-	100	92.754	Ornithorhynchus_anatinus
ENSPLAG00000013524	-	77	89.474	ENSPTIG00000005413	-	70	89.130	Panthera_tigris_altaica
ENSPLAG00000013524	-	98	99.174	ENSPKIG00000024667	-	98	99.174	Paramormyrops_kingsleyae
ENSPLAG00000013524	-	100	100.000	ENSPMEG00000011603	-	100	100.000	Poecilia_mexicana
ENSPLAG00000013524	-	55	72.059	ENSPNYG00000011502	-	50	83.019	Pundamilia_nyererei
ENSPLAG00000013524	-	74	93.478	ENSSLDG00000015995	-	50	84.167	Seriola_lalandi_dorsalis
ENSPLAG00000013524	-	77	89.474	ENSUAMG00000025729	-	75	89.130	Ursus_americanus
ENSPLAG00000013524	-	77	89.474	ENSUMAG00000008820	-	75	89.130	Ursus_maritimus
ENSPLAG00000013524	-	98	76.230	ENSVVUG00000018262	-	92	75.410	Vulpes_vulpes
ENSPLAG00000013524	-	72	91.011	ENSVVUG00000003252	-	77	91.011	Vulpes_vulpes