EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000013538 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3725 bases
Position: chrLMXD01022248.1:1245-4969
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000010578	RRM_1	PF00076.22	4e-08	1	1
ENSPLAP00000010572	RRM_1	PF00076.22	5.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000017704	-	423	-	ENSPLAP00000010572	140 (aa)	-	-
ENSPLAT00000017710	-	357	-	ENSPLAP00000010578	118 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000013538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000013538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000013538	-	87	69.903	ENSPLAG00000023759	-	80	71.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000013538	-	86	61.765	ENSCVAG00000011435	-	90	63.107	Cyprinodon_variegatus
ENSPLAG00000013538	-	72	68.235	ENSGAFG00000006965	-	82	68.235	Gambusia_affinis
ENSPLAG00000013538	-	86	85.149	ENSGAFG00000006970	-	95	84.615	Gambusia_affinis
ENSPLAG00000013538	-	95	92.857	ENSPFOG00000021959	-	85	92.857	Poecilia_formosa
ENSPLAG00000013538	-	92	65.487	ENSPFOG00000022708	-	90	63.934	Poecilia_formosa
ENSPLAG00000013538	-	89	69.524	ENSPMEG00000014957	-	67	69.524	Poecilia_mexicana
ENSPLAG00000013538	-	95	92.857	ENSPMEG00000014948	-	79	93.636	Poecilia_mexicana
ENSPLAG00000013538	-	89	69.524	ENSPREG00000002388	-	67	69.524	Poecilia_reticulata
ENSPLAG00000013538	-	89	92.381	ENSPREG00000002361	-	100	92.381	Poecilia_reticulata
ENSPLAG00000013538	-	100	84.746	ENSXCOG00000010506	-	100	84.746	Xiphophorus_couchianus
ENSPLAG00000013538	-	87	68.269	ENSXCOG00000015682	-	85	66.667	Xiphophorus_couchianus
ENSPLAG00000013538	-	86	66.337	ENSXMAG00000027771	-	99	66.337	Xiphophorus_maculatus
ENSPLAG00000013538	-	95	63.158	ENSXMAG00000022455	-	73	64.602	Xiphophorus_maculatus
ENSPLAG00000013538	-	100	84.746	ENSXMAG00000027824	-	100	84.746	Xiphophorus_maculatus
ENSPLAG00000013538	-	87	69.231	ENSXMAG00000026326	-	79	67.593	Xiphophorus_maculatus
ENSPLAG00000013538	-	87	68.269	ENSXMAG00000022673	-	79	66.667	Xiphophorus_maculatus