EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000013594 (Gene tree)
Gene ID: 106957662
Gene Symbol: rab12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 8733 bases
Position: chrKQ546240.1:461-9193
Accession: 106957662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000010620	MMR_HSR1	PF01926.23	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000017861	-	2486	XM_015049081	ENSPLAP00000010620	244 (aa)	XP_014904567	UPI000443F2AF

Gene Model

Click here to download ENSPLAG00000013594's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000013594's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000013594	rab12	70	45.930	ENSPLAG00000015383	rab30	84	45.930
ENSPLAG00000013594	rab12	85	31.250	ENSPLAG00000016748	RHEB	87	30.994
ENSPLAG00000013594	rab12	83	38.967	ENSPLAG00000011175	rab11a	95	38.967
ENSPLAG00000013594	rab12	68	41.667	ENSPLAG00000018322	-	78	41.667
ENSPLAG00000013594	rab12	76	37.368	ENSPLAG00000002799	RAB7A	81	36.686
ENSPLAG00000013594	rab12	71	40.462	ENSPLAG00000021043	si:dkey-16l2.16	82	40.462
ENSPLAG00000013594	rab12	77	47.619	ENSPLAG00000015592	-	83	51.479
ENSPLAG00000013594	rab12	70	51.163	ENSPLAG00000003181	-	84	52.381
ENSPLAG00000013594	rab12	77	37.696	ENSPLAG00000000376	rab41	73	41.026
ENSPLAG00000013594	rab12	65	32.704	ENSPLAG00000015650	rhebl1	85	32.704
ENSPLAG00000013594	rab12	83	39.614	ENSPLAG00000008004	rab25b	80	42.604
ENSPLAG00000013594	rab12	68	32.335	ENSPLAG00000001529	rheb	89	32.335
ENSPLAG00000013594	rab12	83	38.426	ENSPLAG00000001598	rab11bb	80	41.899
ENSPLAG00000013594	rab12	70	40.698	ENSPLAG00000005628	rab42a	78	40.698
ENSPLAG00000013594	rab12	69	51.479	ENSPLAG00000006520	rab1ab	83	51.479
ENSPLAG00000013594	rab12	61	33.775	ENSPLAG00000009163	rras	82	33.537
ENSPLAG00000013594	rab12	68	41.916	ENSPLAG00000007237	RAB39B	78	41.916
ENSPLAG00000013594	rab12	60	39.216	ENSPLAG00000016172	-	63	39.216
ENSPLAG00000013594	rab12	82	36.318	ENSPLAG00000019570	rab6a	75	42.308
ENSPLAG00000013594	rab12	85	35.849	ENSPLAG00000004551	-	80	39.884
ENSPLAG00000013594	rab12	83	38.095	ENSPLAG00000007986	rab11al	76	42.424
ENSPLAG00000013594	rab12	64	36.250	ENSPLAG00000005074	rab34b	63	36.250
ENSPLAG00000013594	rab12	64	31.210	ENSPLAG00000011855	si:ch73-116o1.2	80	31.548
ENSPLAG00000013594	rab12	77	32.990	ENSPLAG00000011697	rab23	78	35.329
ENSPLAG00000013594	rab12	61	31.788	ENSPLAG00000009352	KRAS	85	32.099
ENSPLAG00000013594	rab12	76	37.368	ENSPLAG00000001065	-	81	36.686
ENSPLAG00000013594	rab12	66	46.914	ENSPLAG00000020989	rab35b	94	42.932
ENSPLAG00000013594	rab12	66	34.146	ENSPLAG00000019688	si:dkey-13a21.4	79	34.146
ENSPLAG00000013594	rab12	69	40.828	ENSPLAG00000014563	rab4a	79	40.828
ENSPLAG00000013594	rab12	67	34.524	ENSPLAG00000011866	rab9b	75	34.524
ENSPLAG00000013594	rab12	69	38.690	ENSPLAG00000016333	-	77	37.500
ENSPLAG00000013594	rab12	83	37.963	ENSPLAG00000014243	rab11ba	80	41.111
ENSPLAG00000013594	rab12	65	35.849	ENSPLAG00000018718	rab22a	81	35.849
ENSPLAG00000013594	rab12	67	46.951	ENSPLAG00000019136	rab18b	84	45.143
ENSPLAG00000013594	rab12	69	38.095	ENSPLAG00000017838	rab5aa	77	38.095
ENSPLAG00000013594	rab12	73	41.899	ENSPLAG00000023128	RAB15	80	43.529
ENSPLAG00000013594	rab12	70	34.302	ENSPLAG00000017232	rab22a	87	35.849
ENSPLAG00000013594	rab12	81	41.624	ENSPLAG00000006354	rab15	80	45.029
ENSPLAG00000013594	rab12	79	40.625	ENSPLAG00000023374	rab2a	79	44.048
ENSPLAG00000013594	rab12	73	39.344	ENSPLAG00000020627	zgc:101559	77	39.344
ENSPLAG00000013594	rab12	81	37.056	ENSPLAG00000022515	-	80	39.884
ENSPLAG00000013594	rab12	66	32.919	ENSPLAG00000015685	rabl2	71	32.919
ENSPLAG00000013594	rab12	70	49.412	ENSPLAG00000018655	rab1ba	84	49.704
ENSPLAG00000013594	rab12	83	38.679	ENSPLAG00000014207	-	80	41.667
ENSPLAG00000013594	rab12	79	36.364	ENSPLAG00000005189	rab33a	72	41.104
ENSPLAG00000013594	rab12	69	37.500	ENSPLAG00000004790	rab5c	76	37.500
ENSPLAG00000013594	rab12	74	39.378	ENSPLAG00000021278	rab33ba	83	38.725
ENSPLAG00000013594	rab12	67	47.561	ENSPLAG00000010104	rab18a	79	47.561
ENSPLAG00000013594	rab12	64	40.373	ENSPLAG00000007773	si:dkey-34d22.5	72	40.373
ENSPLAG00000013594	rab12	64	41.667	ENSPLAG00000022260	rab6ba	84	38.286
ENSPLAG00000013594	rab12	70	45.930	ENSPLAG00000005869	zgc:171927	80	45.930
ENSPLAG00000013594	rab12	78	38.220	ENSPLAG00000019707	rab6bb	84	38.857
ENSPLAG00000013594	rab12	78	32.990	ENSPLAG00000006777	-	75	35.714
ENSPLAG00000013594	rab12	71	36.464	ENSPLAG00000002600	RAB29	79	37.278
ENSPLAG00000013594	rab12	83	39.806	ENSPLAG00000003558	rab25a	93	37.864
ENSPLAG00000013594	rab12	67	35.119	ENSPLAG00000022926	rab9a	83	35.119
ENSPLAG00000013594	rab12	67	35.119	ENSPLAG00000007015	rab9a	79	35.119
ENSPLAG00000013594	rab12	70	51.163	ENSPLAG00000005832	RAB13	91	51.163
ENSPLAG00000013594	rab12	66	34.756	ENSPLAG00000022991	rab34a	58	34.756

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000013594	rab12	93	81.579	ENSG00000206418	RAB12	100	82.186	Homo_sapiens
ENSPLAG00000013594	rab12	89	76.256	ENSAMEG00000007452	RAB12	94	79.909	Ailuropoda_melanoleuca
ENSPLAG00000013594	rab12	100	95.902	ENSACIG00000020616	rab12	100	95.902	Amphilophus_citrinellus
ENSPLAG00000013594	rab12	100	94.262	ENSAOCG00000002130	rab12	100	94.262	Amphiprion_ocellaris
ENSPLAG00000013594	rab12	100	94.262	ENSAPEG00000013255	rab12	100	94.262	Amphiprion_percula
ENSPLAG00000013594	rab12	100	93.852	ENSATEG00000019683	rab12	100	93.852	Anabas_testudineus
ENSPLAG00000013594	rab12	82	87.500	ENSACAG00000003360	RAB12	88	85.398	Anolis_carolinensis
ENSPLAG00000013594	rab12	100	96.311	ENSACLG00000007696	rab12	100	96.311	Astatotilapia_calliptera
ENSPLAG00000013594	rab12	100	87.398	ENSAMXG00000004882	rab12	100	87.805	Astyanax_mexicanus
ENSPLAG00000013594	rab12	93	82.018	ENSBTAG00000010356	RAB12	100	82.591	Bos_taurus
ENSPLAG00000013594	rab12	93	82.018	ENSCJAG00000015468	RAB12	72	82.186	Callithrix_jacchus
ENSPLAG00000013594	rab12	93	81.579	ENSCAFG00020023721	RAB12	84	82.186	Canis_lupus_dingo
ENSPLAG00000013594	rab12	93	82.018	ENSCHIG00000016103	RAB12	100	82.591	Capra_hircus
ENSPLAG00000013594	rab12	85	85.238	ENSCPOG00000022689	RAB12	100	87.619	Cavia_porcellus
ENSPLAG00000013594	rab12	93	82.018	ENSCCAG00000022862	RAB12	100	81.781	Cebus_capucinus
ENSPLAG00000013594	rab12	91	82.589	ENSCATG00000037784	RAB12	93	85.778	Cercocebus_atys
ENSPLAG00000013594	rab12	84	86.829	ENSCSAG00000017569	RAB12	72	81.855	Chlorocebus_sabaeus
ENSPLAG00000013594	rab12	93	81.304	ENSCPBG00000028375	RAB12	92	85.841	Chrysemys_picta_bellii
ENSPLAG00000013594	rab12	89	82.648	ENSCANG00000031453	RAB12	99	86.301	Colobus_angolensis_palliatus
ENSPLAG00000013594	rab12	93	82.895	ENSCGRG00001006958	Rab12	83	81.781	Cricetulus_griseus_chok1gshd
ENSPLAG00000013594	rab12	100	94.672	ENSCSEG00000016933	rab12	100	94.672	Cynoglossus_semilaevis
ENSPLAG00000013594	rab12	100	96.341	ENSCVAG00000003539	rab12	100	96.341	Cyprinodon_variegatus
ENSPLAG00000013594	rab12	100	86.066	ENSDARG00000089428	rab12	95	91.031	Danio_rerio
ENSPLAG00000013594	rab12	84	86.341	ENSDNOG00000046064	RAB12	52	85.333	Dasypus_novemcinctus
ENSPLAG00000013594	rab12	91	82.589	ENSDORG00000008920	Rab12	99	85.398	Dipodomys_ordii
ENSPLAG00000013594	rab12	77	65.608	ENSEBUG00000006581	rab12	92	64.583	Eptatretus_burgeri
ENSPLAG00000013594	rab12	93	81.579	ENSEASG00005002926	RAB12	83	81.377	Equus_asinus_asinus
ENSPLAG00000013594	rab12	93	81.579	ENSECAG00000007384	RAB12	71	81.377	Equus_caballus
ENSPLAG00000013594	rab12	100	88.525	ENSELUG00000007123	rab12	100	88.115	Esox_lucius
ENSPLAG00000013594	rab12	93	81.579	ENSFCAG00000027710	RAB12	72	82.186	Felis_catus
ENSPLAG00000013594	rab12	100	95.918	ENSFHEG00000004319	rab12	100	95.918	Fundulus_heteroclitus
ENSPLAG00000013594	rab12	86	90.952	ENSGMOG00000012335	rab12	87	90.476	Gadus_morhua
ENSPLAG00000013594	rab12	91	82.589	ENSGALG00000033608	RAB12	90	85.398	Gallus_gallus
ENSPLAG00000013594	rab12	90	91.324	ENSGACG00000016639	rab12	100	91.324	Gasterosteus_aculeatus
ENSPLAG00000013594	rab12	93	81.304	ENSGAGG00000007278	RAB12	92	85.841	Gopherus_agassizii
ENSPLAG00000013594	rab12	100	96.311	ENSHBUG00000008497	rab12	100	96.311	Haplochromis_burtoni
ENSPLAG00000013594	rab12	96	80.169	ENSHGLG00000006189	RAB12	86	86.425	Heterocephalus_glaber_female
ENSPLAG00000013594	rab12	100	89.388	ENSHCOG00000012376	rab12	100	88.115	Hippocampus_comes
ENSPLAG00000013594	rab12	100	87.295	ENSIPUG00000017401	rab12	100	87.295	Ictalurus_punctatus
ENSPLAG00000013594	rab12	89	82.192	ENSSTOG00000025122	RAB12	96	85.845	Ictidomys_tridecemlineatus
ENSPLAG00000013594	rab12	91	82.589	ENSJJAG00000019064	Rab12	99	85.778	Jaculus_jaculus
ENSPLAG00000013594	rab12	100	90.574	ENSKMAG00000020056	rab12	100	90.164	Kryptolebias_marmoratus
ENSPLAG00000013594	rab12	100	95.082	ENSLBEG00000013756	rab12	100	95.082	Labrus_bergylta
ENSPLAG00000013594	rab12	90	86.547	ENSLACG00000010461	RAB12	91	85.841	Latimeria_chalumnae
ENSPLAG00000013594	rab12	100	83.468	ENSLOCG00000002680	rab12	100	85.484	Lepisosteus_oculatus
ENSPLAG00000013594	rab12	93	81.057	ENSMFAG00000043551	RAB12	100	80.894	Macaca_fascicularis
ENSPLAG00000013594	rab12	84	86.829	ENSMNEG00000040853	RAB12	89	85.778	Macaca_nemestrina
ENSPLAG00000013594	rab12	100	93.852	ENSMAMG00000006862	rab12	100	93.852	Mastacembelus_armatus
ENSPLAG00000013594	rab12	100	96.311	ENSMZEG00005024316	rab12	100	96.311	Maylandia_zebra
ENSPLAG00000013594	rab12	83	82.843	ENSMGAG00000009197	RAB12	100	86.765	Meleagris_gallopavo
ENSPLAG00000013594	rab12	93	82.895	ENSMAUG00000008371	Rab12	83	81.781	Mesocricetus_auratus
ENSPLAG00000013594	rab12	91	82.143	ENSMICG00000030661	RAB12	94	85.333	Microcebus_murinus
ENSPLAG00000013594	rab12	89	83.105	ENSMOCG00000000452	Rab12	100	86.758	Microtus_ochrogaster
ENSPLAG00000013594	rab12	84	87.317	ENSMODG00000021452	RAB12	67	86.222	Monodelphis_domestica
ENSPLAG00000013594	rab12	100	91.393	ENSMALG00000015762	rab12	100	91.393	Monopterus_albus
ENSPLAG00000013594	rab12	93	83.333	MGP_CAROLIEiJ_G0021839	Rab12	84	81.781	Mus_caroli
ENSPLAG00000013594	rab12	93	83.333	ENSMUSG00000023460	Rab12	100	81.781	Mus_musculus
ENSPLAG00000013594	rab12	93	83.333	MGP_PahariEiJ_G0020826	Rab12	100	81.781	Mus_pahari
ENSPLAG00000013594	rab12	93	83.333	MGP_SPRETEiJ_G0022750	Rab12	83	81.781	Mus_spretus
ENSPLAG00000013594	rab12	100	78.138	ENSMLUG00000002883	RAB12	100	81.377	Myotis_lucifugus
ENSPLAG00000013594	rab12	91	75.446	ENSNGAG00000019722	-	92	75.111	Nannospalax_galili
ENSPLAG00000013594	rab12	94	79.828	ENSNGAG00000024103	-	96	85.333	Nannospalax_galili
ENSPLAG00000013594	rab12	100	96.311	ENSNBRG00000014428	rab12	100	96.311	Neolamprologus_brichardi
ENSPLAG00000013594	rab12	93	81.579	ENSNLEG00000006939	RAB12	100	81.781	Nomascus_leucogenys
ENSPLAG00000013594	rab12	100	78.629	ENSMEUG00000000493	RAB12	91	86.222	Notamacropus_eugenii
ENSPLAG00000013594	rab12	89	83.562	ENSODEG00000006414	RAB12	100	87.215	Octodon_degus
ENSPLAG00000013594	rab12	100	96.311	ENSONIG00000018469	rab12	100	96.311	Oreochromis_niloticus
ENSPLAG00000013594	rab12	100	93.852	ENSORLG00000003902	rab12	100	93.852	Oryzias_latipes
ENSPLAG00000013594	rab12	100	94.262	ENSORLG00020005131	rab12	100	94.262	Oryzias_latipes_hni
ENSPLAG00000013594	rab12	100	93.852	ENSORLG00015007869	rab12	100	93.852	Oryzias_latipes_hsok
ENSPLAG00000013594	rab12	100	95.902	ENSOMEG00000008191	rab12	100	95.902	Oryzias_melastigma
ENSPLAG00000013594	rab12	85	82.857	ENSOGAG00000028002	RAB12	99	86.667	Otolemur_garnettii
ENSPLAG00000013594	rab12	78	87.435	ENSOARG00000000728	RAB12	88	85.581	Ovis_aries
ENSPLAG00000013594	rab12	84	82.609	ENSPPAG00000009152	RAB12	97	86.893	Pan_paniscus
ENSPLAG00000013594	rab12	93	81.579	ENSPPRG00000024521	RAB12	100	82.186	Panthera_pardus
ENSPLAG00000013594	rab12	93	81.579	ENSPTRG00000009853	RAB12	100	82.186	Pan_troglodytes
ENSPLAG00000013594	rab12	93	82.895	ENSPANG00000009320	RAB12	100	82.591	Papio_anubis
ENSPLAG00000013594	rab12	100	86.531	ENSPKIG00000008579	rab12	100	86.939	Paramormyrops_kingsleyae
ENSPLAG00000013594	rab12	100	90.164	ENSPMGG00000001890	rab12	100	90.574	Periophthalmus_magnuspinnatus
ENSPLAG00000013594	rab12	93	82.456	ENSPEMG00000021032	Rab12	84	81.377	Peromyscus_maniculatus_bairdii
ENSPLAG00000013594	rab12	88	84.793	ENSPCIG00000010453	RAB12	56	86.222	Phascolarctos_cinereus
ENSPLAG00000013594	rab12	100	100.000	ENSPFOG00000001579	rab12	100	100.000	Poecilia_formosa
ENSPLAG00000013594	rab12	100	100.000	ENSPMEG00000010417	rab12	100	100.000	Poecilia_mexicana
ENSPLAG00000013594	rab12	100	99.590	ENSPREG00000017487	rab12	100	99.590	Poecilia_reticulata
ENSPLAG00000013594	rab12	93	81.579	ENSPPYG00000009015	-	72	82.186	Pongo_abelii
ENSPLAG00000013594	rab12	93	81.579	ENSPCAG00000015007	RAB12	100	81.781	Procavia_capensis
ENSPLAG00000013594	rab12	93	81.579	ENSPCOG00000019816	RAB12	100	82.186	Propithecus_coquereli
ENSPLAG00000013594	rab12	93	82.018	ENSPVAG00000002757	RAB12	100	82.591	Pteropus_vampyrus
ENSPLAG00000013594	rab12	100	96.311	ENSPNYG00000023905	rab12	100	96.311	Pundamilia_nyererei
ENSPLAG00000013594	rab12	100	96.311	ENSPNYG00000005654	rab12	100	96.311	Pundamilia_nyererei
ENSPLAG00000013594	rab12	100	86.585	ENSPNAG00000015031	rab12	100	86.992	Pygocentrus_nattereri
ENSPLAG00000013594	rab12	93	80.786	ENSRNOG00000019295	Rab12	91	79.913	Rattus_norvegicus
ENSPLAG00000013594	rab12	91	82.589	ENSRBIG00000028760	RAB12	97	85.778	Rhinopithecus_bieti
ENSPLAG00000013594	rab12	91	82.589	ENSRROG00000019249	RAB12	94	85.778	Rhinopithecus_roxellana
ENSPLAG00000013594	rab12	94	77.489	ENSSBOG00000021125	RAB12	80	86.603	Saimiri_boliviensis_boliviensis
ENSPLAG00000013594	rab12	93	81.579	ENSSHAG00000001489	RAB12	91	86.341	Sarcophilus_harrisii
ENSPLAG00000013594	rab12	100	92.623	ENSSMAG00000012678	rab12	100	92.623	Scophthalmus_maximus
ENSPLAG00000013594	rab12	100	94.672	ENSSDUG00000008505	rab12	100	94.672	Seriola_dumerili
ENSPLAG00000013594	rab12	100	94.672	ENSSLDG00000022239	rab12	100	94.672	Seriola_lalandi_dorsalis
ENSPLAG00000013594	rab12	83	87.745	ENSSPUG00000003222	RAB12	92	86.283	Sphenodon_punctatus
ENSPLAG00000013594	rab12	100	94.672	ENSSPAG00000010822	rab12	100	94.672	Stegastes_partitus
ENSPLAG00000013594	rab12	100	80.162	ENSSSCG00000038026	RAB12	100	82.591	Sus_scrofa
ENSPLAG00000013594	rab12	93	81.385	ENSTGUG00000009889	RAB12	100	81.200	Taeniopygia_guttata
ENSPLAG00000013594	rab12	100	90.164	ENSTRUG00000024455	rab12	100	89.754	Takifugu_rubripes
ENSPLAG00000013594	rab12	100	91.803	ENSTNIG00000014859	rab12	100	91.393	Tetraodon_nigroviridis
ENSPLAG00000013594	rab12	89	82.648	ENSTTRG00000008711	RAB12	99	86.301	Tursiops_truncatus
ENSPLAG00000013594	rab12	93	81.579	ENSUAMG00000018092	RAB12	100	82.186	Ursus_americanus
ENSPLAG00000013594	rab12	90	81.900	ENSVVUG00000011748	RAB12	99	85.520	Vulpes_vulpes
ENSPLAG00000013594	rab12	95	82.128	ENSXETG00000004289	rab12	79	81.855	Xenopus_tropicalis
ENSPLAG00000013594	rab12	100	97.541	ENSXCOG00000019310	rab12	100	97.541	Xiphophorus_couchianus
ENSPLAG00000013594	rab12	100	97.951	ENSXMAG00000023617	rab12	100	97.951	Xiphophorus_maculatus