EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000013908 (Gene tree)
Gene ID: 106965110
Gene Symbol: -
Alias: -
Full Name: helicase ARIP4-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 53025 bases
Position: chrKQ547078.1:167770-220794
Accession: 106965110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000010892	ResIII	PF04851.15	1.3e-07	1	1
ENSPLAP00000010905	ResIII	PF04851.15	1.4e-07	1	1
ENSPLAP00000010879	ResIII	PF04851.15	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000018115	-	9255	XM_015061011	ENSPLAP00000010892	1486 (aa)	XP_014916497	UPI00072DF279
ENSPLAT00000018101	-	9346	XM_015061014	ENSPLAP00000010905	1451 (aa)	XP_014916500	-
ENSPLAT00000018113	-	9278	XM_015061013	ENSPLAP00000010879	1461 (aa)	XP_014916499	-

Gene Model

Click here to download ENSPLAG00000013908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000013908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000013908	-	95	61.588	ENSPLAG00000006015	rad54l2	95	59.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000013908	-	92	59.740	ENSG00000164080	RAD54L2	98	58.513	Homo_sapiens
ENSPLAG00000013908	-	100	81.414	ENSAPOG00000024141	-	100	81.212	Acanthochromis_polyacanthus
ENSPLAG00000013908	-	92	59.711	ENSAMEG00000009326	RAD54L2	91	59.898	Ailuropoda_melanoleuca
ENSPLAG00000013908	-	86	64.198	ENSACIG00000018079	rad54l2	91	63.546	Amphilophus_citrinellus
ENSPLAG00000013908	-	94	76.272	ENSACIG00000015932	-	100	76.129	Amphilophus_citrinellus
ENSPLAG00000013908	-	100	80.673	ENSAOCG00000022380	-	99	80.656	Amphiprion_ocellaris
ENSPLAG00000013908	-	100	78.930	ENSATEG00000006641	-	98	79.062	Anabas_testudineus
ENSPLAG00000013908	-	98	61.209	ENSATEG00000009346	rad54l2	95	60.934	Anabas_testudineus
ENSPLAG00000013908	-	99	59.517	ENSAPLG00000002121	RAD54L2	98	60.193	Anas_platyrhynchos
ENSPLAG00000013908	-	85	64.816	ENSACAG00000015883	RAD54L2	94	64.628	Anolis_carolinensis
ENSPLAG00000013908	-	92	59.524	ENSANAG00000025396	RAD54L2	91	59.710	Aotus_nancymaae
ENSPLAG00000013908	-	98	59.826	ENSACLG00000019111	rad54l2	95	60.424	Astatotilapia_calliptera
ENSPLAG00000013908	-	100	79.050	ENSACLG00000018296	-	100	79.197	Astatotilapia_calliptera
ENSPLAG00000013908	-	95	61.681	ENSAMXG00000013807	rad54l2	96	60.166	Astyanax_mexicanus
ENSPLAG00000013908	-	92	59.294	ENSBTAG00000032253	RAD54L2	93	59.624	Bos_taurus
ENSPLAG00000013908	-	92	59.812	ENSCJAG00000005575	RAD54L2	89	62.697	Callithrix_jacchus
ENSPLAG00000013908	-	92	59.422	ENSCAFG00000010120	RAD54L2	91	59.753	Canis_familiaris
ENSPLAG00000013908	-	92	59.422	ENSCAFG00020022320	RAD54L2	91	59.753	Canis_lupus_dingo
ENSPLAG00000013908	-	92	59.483	ENSCHIG00000008830	RAD54L2	93	58.549	Capra_hircus
ENSPLAG00000013908	-	92	59.452	ENSTSYG00000013200	RAD54L2	91	59.638	Carlito_syrichta
ENSPLAG00000013908	-	76	72.222	ENSCAPG00000016465	RAD54L2	91	59.547	Cavia_aperea
ENSPLAG00000013908	-	92	59.596	ENSCPOG00000005941	RAD54L2	94	58.815	Cavia_porcellus
ENSPLAG00000013908	-	79	59.818	ENSCCAG00000024465	RAD54L2	90	59.818	Cebus_capucinus
ENSPLAG00000013908	-	94	58.873	ENSCATG00000039891	RAD54L2	95	59.052	Cercocebus_atys
ENSPLAG00000013908	-	92	59.840	ENSCLAG00000008059	RAD54L2	94	58.604	Chinchilla_lanigera
ENSPLAG00000013908	-	92	59.856	ENSCSAG00000014027	RAD54L2	94	59.068	Chlorocebus_sabaeus
ENSPLAG00000013908	-	97	60.094	ENSCPBG00000016624	RAD54L2	98	60.311	Chrysemys_picta_bellii
ENSPLAG00000013908	-	70	50.621	ENSCING00000009208	-	95	50.188	Ciona_intestinalis
ENSPLAG00000013908	-	92	59.639	ENSCANG00000036093	RAD54L2	95	58.857	Colobus_angolensis_palliatus
ENSPLAG00000013908	-	92	59.800	ENSCGRG00000007921	Rad54l2	91	60.014	Cricetulus_griseus_crigri
ENSPLAG00000013908	-	98	58.249	ENSCSEG00000001740	rad54l2	96	57.584	Cynoglossus_semilaevis
ENSPLAG00000013908	-	87	75.900	ENSCSEG00000006115	-	100	74.240	Cynoglossus_semilaevis
ENSPLAG00000013908	-	100	86.226	ENSCVAG00000005376	-	97	87.255	Cyprinodon_variegatus
ENSPLAG00000013908	-	96	60.644	ENSCVAG00000017887	rad54l2	94	59.792	Cyprinodon_variegatus
ENSPLAG00000013908	-	95	62.855	ENSDARG00000063031	rad54l2	97	62.412	Danio_rerio
ENSPLAG00000013908	-	94	57.987	ENSDNOG00000017359	RAD54L2	97	58.410	Dasypus_novemcinctus
ENSPLAG00000013908	-	84	67.301	ENSDORG00000000651	Rad54l2	85	65.747	Dipodomys_ordii
ENSPLAG00000013908	-	69	51.786	FBgn0034976	CG4049	60	52.489	Drosophila_melanogaster
ENSPLAG00000013908	-	93	58.051	ENSETEG00000013290	RAD54L2	96	59.679	Echinops_telfairi
ENSPLAG00000013908	-	71	56.642	ENSEBUG00000001591	rad54l2	74	59.835	Eptatretus_burgeri
ENSPLAG00000013908	-	92	60.102	ENSEASG00005012868	RAD54L2	91	59.898	Equus_asinus_asinus
ENSPLAG00000013908	-	92	60.102	ENSECAG00000014759	RAD54L2	91	59.711	Equus_caballus
ENSPLAG00000013908	-	79	67.300	ENSEEUG00000001759	RAD54L2	84	67.300	Erinaceus_europaeus
ENSPLAG00000013908	-	97	68.838	ENSELUG00000011246	RAD54L2	97	68.465	Esox_lucius
ENSPLAG00000013908	-	92	59.639	ENSFCAG00000018563	RAD54L2	91	59.826	Felis_catus
ENSPLAG00000013908	-	83	65.570	ENSFALG00000008938	RAD54L2	96	63.815	Ficedula_albicollis
ENSPLAG00000013908	-	92	59.668	ENSFDAG00000017084	RAD54L2	94	58.886	Fukomys_damarensis
ENSPLAG00000013908	-	95	61.861	ENSFHEG00000023241	rad54l2	94	60.430	Fundulus_heteroclitus
ENSPLAG00000013908	-	100	88.363	ENSFHEG00000017845	-	98	88.049	Fundulus_heteroclitus
ENSPLAG00000013908	-	91	62.041	ENSGMOG00000010674	rad54l2	97	60.889	Gadus_morhua
ENSPLAG00000013908	-	95	61.134	ENSGALG00000003243	RAD54L2	95	60.165	Gallus_gallus
ENSPLAG00000013908	-	95	61.758	ENSGAFG00000021535	rad54l2	91	61.378	Gambusia_affinis
ENSPLAG00000013908	-	99	94.222	ENSGAFG00000002396	-	98	93.707	Gambusia_affinis
ENSPLAG00000013908	-	95	60.981	ENSGACG00000001558	rad54l2	96	61.197	Gasterosteus_aculeatus
ENSPLAG00000013908	-	88	76.584	ENSGACG00000005642	-	100	76.584	Gasterosteus_aculeatus
ENSPLAG00000013908	-	93	62.256	ENSGAGG00000020971	RAD54L2	96	62.012	Gopherus_agassizii
ENSPLAG00000013908	-	92	59.740	ENSGGOG00000010032	RAD54L2	92	59.928	Gorilla_gorilla
ENSPLAG00000013908	-	100	78.916	ENSHBUG00000018930	-	100	79.064	Haplochromis_burtoni
ENSPLAG00000013908	-	98	59.640	ENSHBUG00000012480	rad54l2	95	60.490	Haplochromis_burtoni
ENSPLAG00000013908	-	92	59.913	ENSHGLG00000012116	RAD54L2	94	58.674	Heterocephalus_glaber_female
ENSPLAG00000013908	-	92	59.913	ENSHGLG00100007205	RAD54L2	94	58.674	Heterocephalus_glaber_male
ENSPLAG00000013908	-	99	71.805	ENSHCOG00000006741	-	97	72.187	Hippocampus_comes
ENSPLAG00000013908	-	98	58.551	ENSHCOG00000007601	rad54l2	92	58.962	Hippocampus_comes
ENSPLAG00000013908	-	97	58.873	ENSIPUG00000024973	-	89	62.855	Ictalurus_punctatus
ENSPLAG00000013908	-	95	58.693	ENSIPUG00000019664	rad54l2	96	57.113	Ictalurus_punctatus
ENSPLAG00000013908	-	94	58.807	ENSSTOG00000010014	RAD54L2	96	57.259	Ictidomys_tridecemlineatus
ENSPLAG00000013908	-	94	58.815	ENSJJAG00000014332	Rad54l2	94	58.994	Jaculus_jaculus
ENSPLAG00000013908	-	99	82.570	ENSKMAG00000002931	-	98	82.659	Kryptolebias_marmoratus
ENSPLAG00000013908	-	99	58.096	ENSKMAG00000001976	rad54l2	94	60.873	Kryptolebias_marmoratus
ENSPLAG00000013908	-	87	77.873	ENSLBEG00000008534	-	98	78.764	Labrus_bergylta
ENSPLAG00000013908	-	95	60.762	ENSLBEG00000018779	rad54l2	93	61.049	Labrus_bergylta
ENSPLAG00000013908	-	99	56.432	ENSLACG00000016004	RAD54L2	96	57.172	Latimeria_chalumnae
ENSPLAG00000013908	-	73	72.531	ENSLOCG00000014222	rad54l2	99	72.248	Lepisosteus_oculatus
ENSPLAG00000013908	-	92	60.276	ENSLAFG00000005966	RAD54L2	90	60.276	Loxodonta_africana
ENSPLAG00000013908	-	92	59.856	ENSMFAG00000041836	RAD54L2	95	59.068	Macaca_fascicularis
ENSPLAG00000013908	-	92	59.856	ENSMMUG00000012002	RAD54L2	94	59.068	Macaca_mulatta
ENSPLAG00000013908	-	92	59.856	ENSMNEG00000035063	RAD54L2	96	59.068	Macaca_nemestrina
ENSPLAG00000013908	-	92	59.856	ENSMLEG00000034668	RAD54L2	95	59.068	Mandrillus_leucophaeus
ENSPLAG00000013908	-	91	69.705	ENSMAMG00000023761	rad54l2	96	66.611	Mastacembelus_armatus
ENSPLAG00000013908	-	100	77.942	ENSMAMG00000015321	-	100	77.929	Mastacembelus_armatus
ENSPLAG00000013908	-	98	59.920	ENSMZEG00005012584	rad54l2	97	60.467	Maylandia_zebra
ENSPLAG00000013908	-	100	78.983	ENSMZEG00005021308	-	100	79.130	Maylandia_zebra
ENSPLAG00000013908	-	95	61.290	ENSMGAG00000002911	RAD54L2	91	61.771	Meleagris_gallopavo
ENSPLAG00000013908	-	72	67.857	ENSMAUG00000011651	Rad54l2	94	68.147	Mesocricetus_auratus
ENSPLAG00000013908	-	95	58.741	ENSMICG00000002777	RAD54L2	86	63.578	Microcebus_murinus
ENSPLAG00000013908	-	95	58.258	ENSMOCG00000022448	Rad54l2	96	58.432	Microtus_ochrogaster
ENSPLAG00000013908	-	94	75.971	ENSMMOG00000016901	-	99	75.396	Mola_mola
ENSPLAG00000013908	-	94	60.186	ENSMMOG00000021709	rad54l2	92	61.247	Mola_mola
ENSPLAG00000013908	-	90	62.408	ENSMODG00000011850	RAD54L2	94	62.408	Monodelphis_domestica
ENSPLAG00000013908	-	85	77.105	ENSMALG00000015084	-	97	82.363	Monopterus_albus
ENSPLAG00000013908	-	94	59.097	MGP_CAROLIEiJ_G0032634	Rad54l2	94	58.807	Mus_caroli
ENSPLAG00000013908	-	94	58.782	ENSMUSG00000040661	Rad54l2	94	58.492	Mus_musculus
ENSPLAG00000013908	-	94	58.886	MGP_PahariEiJ_G0015502	Rad54l2	94	58.596	Mus_pahari
ENSPLAG00000013908	-	94	58.998	MGP_SPRETEiJ_G0033779	Rad54l2	94	58.708	Mus_spretus
ENSPLAG00000013908	-	94	58.521	ENSMPUG00000011865	RAD54L2	94	58.699	Mustela_putorius_furo
ENSPLAG00000013908	-	92	60.072	ENSMLUG00000004605	RAD54L2	91	60.261	Myotis_lucifugus
ENSPLAG00000013908	-	94	59.116	ENSNGAG00000015629	Rad54l2	94	59.296	Nannospalax_galili
ENSPLAG00000013908	-	100	78.983	ENSNBRG00000022847	-	100	78.983	Neolamprologus_brichardi
ENSPLAG00000013908	-	95	61.297	ENSNBRG00000001937	rad54l2	88	64.941	Neolamprologus_brichardi
ENSPLAG00000013908	-	92	59.740	ENSNLEG00000007038	RAD54L2	93	59.928	Nomascus_leucogenys
ENSPLAG00000013908	-	90	71.273	ENSMEUG00000009835	RAD54L2	93	71.273	Notamacropus_eugenii
ENSPLAG00000013908	-	95	58.421	ENSODEG00000018266	RAD54L2	96	57.690	Octodon_degus
ENSPLAG00000013908	-	96	79.930	ENSONIG00000001663	-	98	80.126	Oreochromis_niloticus
ENSPLAG00000013908	-	98	61.464	ENSONIG00000014468	rad54l2	97	60.683	Oreochromis_niloticus
ENSPLAG00000013908	-	95	59.972	ENSOANG00000012793	RAD54L2	94	61.660	Ornithorhynchus_anatinus
ENSPLAG00000013908	-	94	58.263	ENSOCUG00000017577	RAD54L2	94	58.439	Oryctolagus_cuniculus
ENSPLAG00000013908	-	99	76.439	ENSORLG00000002714	-	99	77.048	Oryzias_latipes
ENSPLAG00000013908	-	98	59.239	ENSORLG00000002276	rad54l2	95	59.142	Oryzias_latipes
ENSPLAG00000013908	-	99	76.398	ENSORLG00020019256	-	99	76.980	Oryzias_latipes_hni
ENSPLAG00000013908	-	97	59.632	ENSORLG00020003470	rad54l2	96	59.320	Oryzias_latipes_hni
ENSPLAG00000013908	-	97	59.659	ENSORLG00015021530	rad54l2	95	59.388	Oryzias_latipes_hsok
ENSPLAG00000013908	-	99	76.828	ENSORLG00015013408	-	99	77.245	Oryzias_latipes_hsok
ENSPLAG00000013908	-	97	59.470	ENSOMEG00000005597	rad54l2	94	58.820	Oryzias_melastigma
ENSPLAG00000013908	-	99	75.443	ENSOMEG00000008216	-	98	75.774	Oryzias_melastigma
ENSPLAG00000013908	-	77	61.326	ENSOGAG00000012442	RAD54L2	97	61.326	Otolemur_garnettii
ENSPLAG00000013908	-	92	59.539	ENSOARG00000007264	RAD54L2	91	59.553	Ovis_aries
ENSPLAG00000013908	-	92	59.740	ENSPPAG00000038472	RAD54L2	92	59.928	Pan_paniscus
ENSPLAG00000013908	-	92	59.639	ENSPPRG00000010212	RAD54L2	91	59.826	Panthera_pardus
ENSPLAG00000013908	-	92	59.639	ENSPTIG00000002240	RAD54L2	91	59.826	Panthera_tigris_altaica
ENSPLAG00000013908	-	92	59.740	ENSPTRG00000014974	RAD54L2	92	59.928	Pan_troglodytes
ENSPLAG00000013908	-	93	58.890	ENSPANG00000000857	RAD54L2	95	59.068	Papio_anubis
ENSPLAG00000013908	-	100	65.499	ENSPKIG00000001065	rad54l2	98	66.434	Paramormyrops_kingsleyae
ENSPLAG00000013908	-	69	70.882	ENSPSIG00000014346	RAD54L2	96	67.801	Pelodiscus_sinensis
ENSPLAG00000013908	-	95	69.308	ENSPMGG00000000641	-	97	69.578	Periophthalmus_magnuspinnatus
ENSPLAG00000013908	-	86	62.391	ENSPMGG00000002208	rad54l2	96	63.449	Periophthalmus_magnuspinnatus
ENSPLAG00000013908	-	94	58.609	ENSPEMG00000012051	Rad54l2	94	58.857	Peromyscus_maniculatus_bairdii
ENSPLAG00000013908	-	90	61.727	ENSPCIG00000018143	RAD54L2	92	63.767	Phascolarctos_cinereus
ENSPLAG00000013908	-	95	61.905	ENSPFOG00000018644	rad54l2	91	61.401	Poecilia_formosa
ENSPLAG00000013908	-	100	98.773	ENSPFOG00000000197	-	100	98.773	Poecilia_formosa
ENSPLAG00000013908	-	100	98.364	ENSPMEG00000009878	-	100	98.364	Poecilia_mexicana
ENSPLAG00000013908	-	95	61.834	ENSPMEG00000021535	rad54l2	91	61.712	Poecilia_mexicana
ENSPLAG00000013908	-	94	61.472	ENSPREG00000008628	rad54l2	96	62.360	Poecilia_reticulata
ENSPLAG00000013908	-	100	96.939	ENSPREG00000013377	RAD54L2	100	96.939	Poecilia_reticulata
ENSPLAG00000013908	-	92	59.812	ENSPPYG00000013831	RAD54L2	95	60.000	Pongo_abelii
ENSPLAG00000013908	-	75	60.311	ENSPCAG00000011952	RAD54L2	80	60.311	Procavia_capensis
ENSPLAG00000013908	-	98	57.609	ENSPCOG00000015983	RAD54L2	86	62.133	Propithecus_coquereli
ENSPLAG00000013908	-	94	61.251	ENSPNYG00000020693	rad54l2	88	65.512	Pundamilia_nyererei
ENSPLAG00000013908	-	100	78.916	ENSPNYG00000011435	-	100	79.064	Pundamilia_nyererei
ENSPLAG00000013908	-	100	63.520	ENSPNAG00000011583	-	97	65.352	Pygocentrus_nattereri
ENSPLAG00000013908	-	95	62.776	ENSPNAG00000006451	rad54l2	96	61.107	Pygocentrus_nattereri
ENSPLAG00000013908	-	94	55.274	ENSRNOG00000013570	Rad54l2	94	55.767	Rattus_norvegicus
ENSPLAG00000013908	-	70	66.315	ENSRNOG00000049489	LOC102552166	94	66.602	Rattus_norvegicus
ENSPLAG00000013908	-	92	59.639	ENSRBIG00000032434	RAD54L2	97	58.280	Rhinopithecus_bieti
ENSPLAG00000013908	-	92	59.639	ENSRROG00000042309	RAD54L2	93	59.826	Rhinopithecus_roxellana
ENSPLAG00000013908	-	94	58.392	ENSSBOG00000002139	RAD54L2	94	58.567	Saimiri_boliviensis_boliviensis
ENSPLAG00000013908	-	95	60.891	ENSSHAG00000008604	RAD54L2	97	59.320	Sarcophilus_harrisii
ENSPLAG00000013908	-	100	66.689	ENSSFOG00015019014	rad54l2	98	67.711	Scleropages_formosus
ENSPLAG00000013908	-	95	60.384	ENSSMAG00000020933	rad54l2	95	58.609	Scophthalmus_maximus
ENSPLAG00000013908	-	100	75.674	ENSSMAG00000009978	-	100	75.608	Scophthalmus_maximus
ENSPLAG00000013908	-	100	79.544	ENSSDUG00000016711	-	98	80.164	Seriola_dumerili
ENSPLAG00000013908	-	98	59.867	ENSSDUG00000014268	rad54l2	92	62.949	Seriola_dumerili
ENSPLAG00000013908	-	97	77.584	ENSSLDG00000023388	-	99	78.073	Seriola_lalandi_dorsalis
ENSPLAG00000013908	-	95	61.588	ENSSLDG00000023959	rad54l2	97	62.216	Seriola_lalandi_dorsalis
ENSPLAG00000013908	-	93	80.911	ENSSPAG00000006371	-	98	81.377	Stegastes_partitus
ENSPLAG00000013908	-	95	61.847	ENSSPAG00000016532	rad54l2	96	60.519	Stegastes_partitus
ENSPLAG00000013908	-	95	58.281	ENSSSCG00000011425	RAD54L2	91	59.608	Sus_scrofa
ENSPLAG00000013908	-	95	60.754	ENSTGUG00000004888	RAD54L2	95	60.041	Taeniopygia_guttata
ENSPLAG00000013908	-	100	73.892	ENSTRUG00000011066	-	100	74.029	Takifugu_rubripes
ENSPLAG00000013908	-	95	60.478	ENSTRUG00000013962	rad54l2	97	58.525	Takifugu_rubripes
ENSPLAG00000013908	-	77	76.161	ENSTNIG00000006049	-	100	75.982	Tetraodon_nigroviridis
ENSPLAG00000013908	-	75	69.810	ENSTNIG00000014694	rad54l2	99	67.296	Tetraodon_nigroviridis
ENSPLAG00000013908	-	86	58.696	ENSTBEG00000003377	RAD54L2	96	59.190	Tupaia_belangeri
ENSPLAG00000013908	-	92	60.190	ENSUAMG00000020891	RAD54L2	94	59.767	Ursus_americanus
ENSPLAG00000013908	-	92	59.855	ENSUMAG00000021678	RAD54L2	91	60.044	Ursus_maritimus
ENSPLAG00000013908	-	92	59.422	ENSVVUG00000026874	RAD54L2	91	59.753	Vulpes_vulpes
ENSPLAG00000013908	-	95	60.820	ENSXETG00000000070	rad54l2	87	64.575	Xenopus_tropicalis
ENSPLAG00000013908	-	97	90.469	ENSXCOG00000002848	-	100	90.469	Xiphophorus_couchianus
ENSPLAG00000013908	-	95	58.058	ENSXCOG00000004961	rad54l2	89	59.587	Xiphophorus_couchianus
ENSPLAG00000013908	-	100	95.978	ENSXMAG00000019370	-	100	95.978	Xiphophorus_maculatus
ENSPLAG00000013908	-	95	60.977	ENSXMAG00000017182	rad54l2	95	62.097	Xiphophorus_maculatus