EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000014294 (Gene tree)
Gene ID
106954812
Gene Symbol
smarca4a
Alias
-
Full Name
transcription activator BRG1
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Minus strand
Length
18705 bases
Position
chrKQ545998.1:28166-46870
Accession
106954812
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000026427ResIIIPF04851.153.9e-0911
ENSPLAP00000011150ResIIIPF04851.154.3e-0911
ENSPLAP00000026427BRKPF07533.165e-1611
ENSPLAP00000011150BRKPF07533.165.5e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000018428-4569-ENSPLAP000000264271522 (aa)--
ENSPLAT00000029087-5861XM_015044594ENSPLAP000000111501636 (aa)XP_014900080UPI00072ED006
Gene Model
Click here to download ENSPLAG00000014294's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000014294's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000014294smarca4a9980.868ENSPLAG00000018616-9884.843
ENSPLAG00000014294smarca4a9971.438ENSPLAG00000017829SMARCA29471.725
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000014294smarca4a10086.853ENSG00000127616SMARCA499100.000Homo_sapiens
ENSPLAG00000014294smarca4a9583.043ENSAPOG00000004542SMARCA49986.354Acanthochromis_polyacanthus
ENSPLAG00000014294smarca4a8091.108ENSAPOG00000003509smarca4a9889.976Acanthochromis_polyacanthus
ENSPLAG00000014294smarca4a9983.836ENSAMEG00000010868SMARCA410079.144Ailuropoda_melanoleuca
ENSPLAG00000014294smarca4a9586.364ENSACIG00000003035-9786.880Amphilophus_citrinellus
ENSPLAG00000014294smarca4a9992.738ENSACIG00000021550smarca4a9891.938Amphilophus_citrinellus
ENSPLAG00000014294smarca4a9485.445ENSAOCG00000009450-9785.594Amphiprion_ocellaris
ENSPLAG00000014294smarca4a8990.415ENSAOCG00000019167smarca4a10089.843Amphiprion_ocellaris
ENSPLAG00000014294smarca4a8990.486ENSAPEG00000015559smarca4a10089.914Amphiprion_percula
ENSPLAG00000014294smarca4a9983.842ENSAPEG00000023108-9883.594Amphiprion_percula
ENSPLAG00000014294smarca4a10084.421ENSATEG00000001094-9985.055Anabas_testudineus
ENSPLAG00000014294smarca4a10091.555ENSATEG00000011524smarca4a10091.312Anabas_testudineus
ENSPLAG00000014294smarca4a9986.769ENSANAG00000036991SMARCA410083.816Aotus_nancymaae
ENSPLAG00000014294smarca4a9585.743ENSACLG00000008638-9885.762Astatotilapia_calliptera
ENSPLAG00000014294smarca4a9992.455ENSACLG00000000163smarca4a9891.353Astatotilapia_calliptera
ENSPLAG00000014294smarca4a9787.615ENSAMXG00000021023smarca4a9986.882Astyanax_mexicanus
ENSPLAG00000014294smarca4a9485.557ENSAMXG00000011238-9686.848Astyanax_mexicanus
ENSPLAG00000014294smarca4a10086.131ENSBTAG00000019220SMARCA410083.903Bos_taurus
ENSPLAG00000014294smarca4a10082.914ENSCJAG00000005936SMARCA49488.409Callithrix_jacchus
ENSPLAG00000014294smarca4a10086.740ENSCAFG00000017584SMARCA410083.364Canis_familiaris
ENSPLAG00000014294smarca4a10086.740ENSCAFG00020024620SMARCA410082.402Canis_lupus_dingo
ENSPLAG00000014294smarca4a10082.139ENSCHIG00000015318SMARCA410079.950Capra_hircus
ENSPLAG00000014294smarca4a10086.513ENSTSYG00000012966SMARCA410085.401Carlito_syrichta
ENSPLAG00000014294smarca4a9383.610ENSCAPG00000015932SMARCA49389.524Cavia_aperea
ENSPLAG00000014294smarca4a10086.521ENSCPOG00000015549SMARCA410083.138Cavia_porcellus
ENSPLAG00000014294smarca4a9985.105ENSCCAG00000031660SMARCA49983.001Cebus_capucinus
ENSPLAG00000014294smarca4a10086.800ENSCATG00000029530SMARCA410083.364Cercocebus_atys
ENSPLAG00000014294smarca4a10086.123ENSCLAG00000011946SMARCA410085.523Chinchilla_lanigera
ENSPLAG00000014294smarca4a10086.278ENSCPBG00000009994SMARCA410085.446Chrysemys_picta_bellii
ENSPLAG00000014294smarca4a10086.861ENSCANG00000036013SMARCA49886.960Colobus_angolensis_palliatus
ENSPLAG00000014294smarca4a10086.557ENSCGRG00001016732Smarca410085.358Cricetulus_griseus_chok1gshd
ENSPLAG00000014294smarca4a10086.557ENSCGRG00000017242Smarca410085.358Cricetulus_griseus_crigri
ENSPLAG00000014294smarca4a9691.499ENSCSEG00000014771smarca4a10090.644Cynoglossus_semilaevis
ENSPLAG00000014294smarca4a9996.130ENSCVAG00000006979smarca4a9996.130Cyprinodon_variegatus
ENSPLAG00000014294smarca4a9982.952ENSCVAG00000003018-9882.829Cyprinodon_variegatus
ENSPLAG00000014294smarca4a10088.053ENSDARG00000077226smarca4a10087.811Danio_rerio
ENSPLAG00000014294smarca4a9282.218ENSDARG00000104339SMARCA49482.649Danio_rerio
ENSPLAG00000014294smarca4a9981.935ENSDNOG00000048847SMARCA49090.899Dasypus_novemcinctus
ENSPLAG00000014294smarca4a8285.714ENSDORG00000002544Smarca49279.531Dipodomys_ordii
ENSPLAG00000014294smarca4a9278.924ENSETEG00000013361SMARCA49474.747Echinops_telfairi
ENSPLAG00000014294smarca4a10086.618ENSEASG00005006167SMARCA410083.522Equus_asinus_asinus
ENSPLAG00000014294smarca4a10086.679ENSECAG00000008334SMARCA410083.241Equus_caballus
ENSPLAG00000014294smarca4a10088.267ENSELUG00000010247smarca4a10086.883Esox_lucius
ENSPLAG00000014294smarca4a9980.601ENSELUG00000023232-9883.790Esox_lucius
ENSPLAG00000014294smarca4a10086.582ENSFCAG00000004894SMARCA410083.323Felis_catus
ENSPLAG00000014294smarca4a9182.545ENSFALG00000004208SMARCA49780.091Ficedula_albicollis
ENSPLAG00000014294smarca4a9286.812ENSFDAG00000012237SMARCA49785.639Fukomys_damarensis
ENSPLAG00000014294smarca4a10083.938ENSFHEG00000007902-9983.046Fundulus_heteroclitus
ENSPLAG00000014294smarca4a10096.046ENSFHEG00000010182smarca4a10096.046Fundulus_heteroclitus
ENSPLAG00000014294smarca4a8990.678ENSGMOG00000002649smarca4a9487.240Gadus_morhua
ENSPLAG00000014294smarca4a9080.206ENSGMOG00000005756-9079.331Gadus_morhua
ENSPLAG00000014294smarca4a7485.738ENSGALG00000047145SMARCA410084.831Gallus_gallus
ENSPLAG00000014294smarca4a9982.094ENSGAFG00000008827-9882.803Gambusia_affinis
ENSPLAG00000014294smarca4a9198.590ENSGAFG00000014900smarca4a10098.590Gambusia_affinis
ENSPLAG00000014294smarca4a9889.932ENSGACG00000006691smarca4a9889.248Gasterosteus_aculeatus
ENSPLAG00000014294smarca4a9978.537ENSGACG00000016033-10077.393Gasterosteus_aculeatus
ENSPLAG00000014294smarca4a10086.496ENSGAGG00000016757SMARCA410085.662Gopherus_agassizii
ENSPLAG00000014294smarca4a10086.800ENSGGOG00000009882SMARCA410083.739Gorilla_gorilla
ENSPLAG00000014294smarca4a10083.532ENSHBUG00000005447-9885.657Haplochromis_burtoni
ENSPLAG00000014294smarca4a10092.653ENSHBUG00000021172smarca4a10091.743Haplochromis_burtoni
ENSPLAG00000014294smarca4a10086.432ENSHGLG00000010519SMARCA410082.512Heterocephalus_glaber_female
ENSPLAG00000014294smarca4a10085.680ENSHGLG00100013774SMARCA410084.545Heterocephalus_glaber_male
ENSPLAG00000014294smarca4a9591.688ENSHCOG00000009510smarca4a9691.379Hippocampus_comes
ENSPLAG00000014294smarca4a9883.199ENSIPUG00000016346-9781.338Ictalurus_punctatus
ENSPLAG00000014294smarca4a10087.780ENSIPUG00000006107smarca4a10087.750Ictalurus_punctatus
ENSPLAG00000014294smarca4a10086.618ENSSTOG00000007939SMARCA410083.179Ictidomys_tridecemlineatus
ENSPLAG00000014294smarca4a10084.854ENSJJAG00000012877Smarca410083.244Jaculus_jaculus
ENSPLAG00000014294smarca4a10093.586ENSKMAG00000011931smarca4a10092.975Kryptolebias_marmoratus
ENSPLAG00000014294smarca4a9687.454ENSKMAG00000019518-9885.375Kryptolebias_marmoratus
ENSPLAG00000014294smarca4a9588.179ENSLBEG00000017383smarca4a9786.959Labrus_bergylta
ENSPLAG00000014294smarca4a9582.143ENSLBEG00000020655-9881.804Labrus_bergylta
ENSPLAG00000014294smarca4a5279.398ENSLACG00000015309SMARCA410077.636Latimeria_chalumnae
ENSPLAG00000014294smarca4a10084.802ENSLOCG00000007820smarca4a9984.019Lepisosteus_oculatus
ENSPLAG00000014294smarca4a10086.703ENSLAFG00000001433SMARCA410083.272Loxodonta_africana
ENSPLAG00000014294smarca4a10086.800ENSMFAG00000032146SMARCA410085.600Macaca_fascicularis
ENSPLAG00000014294smarca4a10086.800ENSMMUG00000012042SMARCA49989.965Macaca_mulatta
ENSPLAG00000014294smarca4a10086.618ENSMNEG00000028512SMARCA410085.480Macaca_nemestrina
ENSPLAG00000014294smarca4a10086.740ENSMLEG00000034976SMARCA410085.385Mandrillus_leucophaeus
ENSPLAG00000014294smarca4a9982.085ENSMAMG00000002841-9885.311Mastacembelus_armatus
ENSPLAG00000014294smarca4a10092.649ENSMAMG00000009256smarca4a10091.798Mastacembelus_armatus
ENSPLAG00000014294smarca4a10092.536ENSMZEG00005003889smarca4a10091.748Maylandia_zebra
ENSPLAG00000014294smarca4a9584.369ENSMZEG00005023861-9884.075Maylandia_zebra
ENSPLAG00000014294smarca4a10086.339ENSMAUG00000020731Smarca410085.203Mesocricetus_auratus
ENSPLAG00000014294smarca4a10086.582ENSMICG00000009806SMARCA410083.148Microcebus_murinus
ENSPLAG00000014294smarca4a10086.217ENSMOCG00000022209Smarca410085.021Microtus_ochrogaster
ENSPLAG00000014294smarca4a9590.147ENSMMOG00000007571smarca4a9889.010Mola_mola
ENSPLAG00000014294smarca4a9984.039ENSMMOG00000008466-9883.203Mola_mola
ENSPLAG00000014294smarca4a10085.382ENSMODG00000006287SMARCA410081.288Monodelphis_domestica
ENSPLAG00000014294smarca4a8985.364ENSMALG00000021534-9985.508Monopterus_albus
ENSPLAG00000014294smarca4a9692.128ENSMALG00000003388smarca4a10091.312Monopterus_albus
ENSPLAG00000014294smarca4a10086.488MGP_CAROLIEiJ_G0031879Smarca410085.228Mus_caroli
ENSPLAG00000014294smarca4a10086.488ENSMUSG00000032187Smarca410085.228Mus_musculus
ENSPLAG00000014294smarca4a10086.306MGP_PahariEiJ_G0014745Smarca410085.289Mus_pahari
ENSPLAG00000014294smarca4a10086.488MGP_SPRETEiJ_G0033003Smarca410085.228Mus_spretus
ENSPLAG00000014294smarca4a10086.679ENSMPUG00000005711SMARCA410083.302Mustela_putorius_furo
ENSPLAG00000014294smarca4a10086.634ENSMLUG00000004491-10082.901Myotis_lucifugus
ENSPLAG00000014294smarca4a10086.010ENSNGAG00000021852Smarca410085.723Nannospalax_galili
ENSPLAG00000014294smarca4a8984.703ENSNBRG00000018865-9985.632Neolamprologus_brichardi
ENSPLAG00000014294smarca4a9590.757ENSNBRG00000011457smarca4a9690.665Neolamprologus_brichardi
ENSPLAG00000014294smarca4a9486.939ENSNLEG00000012389SMARCA49483.483Nomascus_leucogenys
ENSPLAG00000014294smarca4a8089.655ENSOPRG00000000885-7689.655Ochotona_princeps
ENSPLAG00000014294smarca4a10084.457ENSODEG00000017127SMARCA410083.770Octodon_degus
ENSPLAG00000014294smarca4a10092.593ENSONIG00000008196smarca4a10091.682Oreochromis_niloticus
ENSPLAG00000014294smarca4a10083.532ENSONIG00000018040-10083.115Oreochromis_niloticus
ENSPLAG00000014294smarca4a9980.234ENSOCUG00000001787SMARCA49880.199Oryctolagus_cuniculus
ENSPLAG00000014294smarca4a10092.181ENSORLG00000015452smarca4a10090.715Oryzias_latipes
ENSPLAG00000014294smarca4a9582.647ENSORLG00000003955-9682.397Oryzias_latipes
ENSPLAG00000014294smarca4a10091.631ENSORLG00020004611smarca4a10090.715Oryzias_latipes_hni
ENSPLAG00000014294smarca4a9582.658ENSORLG00020009728-9682.222Oryzias_latipes_hni
ENSPLAG00000014294smarca4a10091.509ENSORLG00015016560smarca4a10090.593Oryzias_latipes_hsok
ENSPLAG00000014294smarca4a9982.520ENSORLG00015007739-9682.273Oryzias_latipes_hsok
ENSPLAG00000014294smarca4a10092.604ENSOMEG00000007486smarca4a10091.381Oryzias_melastigma
ENSPLAG00000014294smarca4a9782.737ENSOMEG00000016626-9683.066Oryzias_melastigma
ENSPLAG00000014294smarca4a8985.540ENSOGAG00000016148SMARCA410084.386Otolemur_garnettii
ENSPLAG00000014294smarca4a10085.593ENSOARG00000017454SMARCA49884.677Ovis_aries
ENSPLAG00000014294smarca4a10086.800ENSPPAG00000043191SMARCA410083.739Pan_paniscus
ENSPLAG00000014294smarca4a10086.582ENSPPRG00000000064SMARCA410083.323Panthera_pardus
ENSPLAG00000014294smarca4a9683.835ENSPTIG00000017447SMARCA410079.976Panthera_tigris_altaica
ENSPLAG00000014294smarca4a10086.800ENSPTRG00000010488SMARCA410083.739Pan_troglodytes
ENSPLAG00000014294smarca4a10086.740ENSPANG00000011042SMARCA49985.541Papio_anubis
ENSPLAG00000014294smarca4a10087.591ENSPKIG00000007770SMARCA410087.280Paramormyrops_kingsleyae
ENSPLAG00000014294smarca4a10084.620ENSPKIG00000010087-9885.243Paramormyrops_kingsleyae
ENSPLAG00000014294smarca4a10080.701ENSPSIG00000005547SMARCA410079.938Pelodiscus_sinensis
ENSPLAG00000014294smarca4a10086.278ENSPEMG00000020389Smarca410085.082Peromyscus_maniculatus_bairdii
ENSPLAG00000014294smarca4a10087.105ENSPCIG00000017138SMARCA410083.519Phascolarctos_cinereus
ENSPLAG00000014294smarca4a10099.694ENSPFOG00000007892smarca4a10099.694Poecilia_formosa
ENSPLAG00000014294smarca4a9687.751ENSPFOG00000012930-9982.339Poecilia_formosa
ENSPLAG00000014294smarca4a9985.483ENSPMEG00000008929-9885.372Poecilia_mexicana
ENSPLAG00000014294smarca4a9799.494ENSPMEG00000003725smarca4a9899.494Poecilia_mexicana
ENSPLAG00000014294smarca4a10098.418ENSPREG00000014608smarca4a10098.418Poecilia_reticulata
ENSPLAG00000014294smarca4a9983.432ENSPREG00000014823-9883.235Poecilia_reticulata
ENSPLAG00000014294smarca4a10085.033ENSPPYG00000009568SMARCA410083.323Pongo_abelii
ENSPLAG00000014294smarca4a7984.211ENSPCAG00000014054SMARCA47682.781Procavia_capensis
ENSPLAG00000014294smarca4a10086.800ENSPCOG00000023011SMARCA49985.541Propithecus_coquereli
ENSPLAG00000014294smarca4a9681.362ENSPVAG00000007787SMARCA49678.393Pteropus_vampyrus
ENSPLAG00000014294smarca4a9991.516ENSPNYG00000000717smarca4a9692.273Pundamilia_nyererei
ENSPLAG00000014294smarca4a9586.043ENSPNYG00000023995-9886.744Pundamilia_nyererei
ENSPLAG00000014294smarca4a9787.237ENSPNAG00000024136smarca4a9886.541Pygocentrus_nattereri
ENSPLAG00000014294smarca4a9585.321ENSPNAG00000006636-8789.340Pygocentrus_nattereri
ENSPLAG00000014294smarca4a10086.488ENSRNOG00000009271Smarca410085.228Rattus_norvegicus
ENSPLAG00000014294smarca4a10086.740ENSRBIG00000038696SMARCA49983.302Rhinopithecus_bieti
ENSPLAG00000014294smarca4a10086.740ENSRROG00000045509SMARCA49886.818Rhinopithecus_roxellana
ENSPLAG00000014294smarca4a10086.671ENSSBOG00000026896SMARCA49787.371Saimiri_boliviensis_boliviensis
ENSPLAG00000014294smarca4a10087.044ENSSHAG00000001642SMARCA410083.581Sarcophilus_harrisii
ENSPLAG00000014294smarca4a9189.828ENSSFOG00015009921-9489.688Scleropages_formosus
ENSPLAG00000014294smarca4a10088.552ENSSFOG00015013823smarca410087.644Scleropages_formosus
ENSPLAG00000014294smarca4a10091.084ENSSMAG00000003200smarca4a10089.940Scophthalmus_maximus
ENSPLAG00000014294smarca4a10080.867ENSSMAG00000014082-9980.749Scophthalmus_maximus
ENSPLAG00000014294smarca4a9985.256ENSSDUG00000005388-9883.468Seriola_dumerili
ENSPLAG00000014294smarca4a10088.092ENSSDUG00000017298smarca4a10086.224Seriola_dumerili
ENSPLAG00000014294smarca4a10092.405ENSSLDG00000024486smarca4a10091.079Seriola_lalandi_dorsalis
ENSPLAG00000014294smarca4a9585.806ENSSLDG00000023663-9785.541Seriola_lalandi_dorsalis
ENSPLAG00000014294smarca4a6696.273ENSSARG00000013477SMARCA48496.273Sorex_araneus
ENSPLAG00000014294smarca4a9583.185ENSSPUG00000004558SMARCA49882.529Sphenodon_punctatus
ENSPLAG00000014294smarca4a10092.164ENSSPAG00000004248smarca4a10090.838Stegastes_partitus
ENSPLAG00000014294smarca4a9987.213ENSSPAG00000012533-9982.457Stegastes_partitus
ENSPLAG00000014294smarca4a10086.703ENSSSCG00000013629SMARCA410083.272Sus_scrofa
ENSPLAG00000014294smarca4a5089.815ENSTGUG00000015488-9883.909Taeniopygia_guttata
ENSPLAG00000014294smarca4a9582.312ENSTRUG00000001378SMARCA49882.798Takifugu_rubripes
ENSPLAG00000014294smarca4a9084.766ENSTRUG00000004885smarca4a10084.437Takifugu_rubripes
ENSPLAG00000014294smarca4a10081.884ENSTNIG00000004536SMARCA410081.276Tetraodon_nigroviridis
ENSPLAG00000014294smarca4a7390.747ENSTNIG00000004859-10090.747Tetraodon_nigroviridis
ENSPLAG00000014294smarca4a10083.840ENSTTRG00000009519SMARCA410082.370Tursiops_truncatus
ENSPLAG00000014294smarca4a10086.679ENSUAMG00000014661SMARCA410083.302Ursus_americanus
ENSPLAG00000014294smarca4a10080.751ENSUMAG00000022005SMARCA49990.008Ursus_maritimus
ENSPLAG00000014294smarca4a10086.740ENSVVUG00000017820SMARCA49783.364Vulpes_vulpes
ENSPLAG00000014294smarca4a10081.418ENSXETG00000009355smarca410080.369Xenopus_tropicalis
ENSPLAG00000014294smarca4a9984.896ENSXCOG00000013494-9885.007Xiphophorus_couchianus
ENSPLAG00000014294smarca4a10098.166ENSXMAG00000006321smarca4a10098.166Xiphophorus_maculatus
ENSPLAG00000014294smarca4a9985.081ENSXMAG00000007030-9885.398Xiphophorus_maculatus

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