EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000014563 (Gene tree)
Gene ID: 106958994
Gene Symbol: rab4a
Alias: -
Full Name: RAB4A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 7636 bases
Position: chrKQ546351.1:252586-260221
Accession: 106958994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000011461	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000018839	-	2100	XM_015051225	ENSPLAP00000011461	213 (aa)	XP_014906711	UPI000293A040

Gene Model

Click here to download ENSPLAG00000014563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000014563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000014563	rab4a	81	45.349	ENSPLAG00000003181	-	86	45.349
ENSPLAG00000014563	rab4a	80	34.659	ENSPLAG00000008845	dnajc27	64	34.659
ENSPLAG00000014563	rab4a	89	42.188	ENSPLAG00000018322	-	90	42.188
ENSPLAG00000014563	rab4a	77	36.310	ENSPLAG00000022926	rab9a	83	36.310
ENSPLAG00000014563	rab4a	81	45.349	ENSPLAG00000005832	RAB13	96	43.889
ENSPLAG00000014563	rab4a	82	38.286	ENSPLAG00000000376	rab41	83	38.286
ENSPLAG00000014563	rab4a	83	48.295	ENSPLAG00000003558	rab25a	82	48.295
ENSPLAG00000014563	rab4a	82	33.702	ENSPLAG00000002600	RAB29	84	33.702
ENSPLAG00000014563	rab4a	79	40.828	ENSPLAG00000013594	rab12	69	40.828
ENSPLAG00000014563	rab4a	79	40.828	ENSPLAG00000021043	si:dkey-16l2.16	80	40.828
ENSPLAG00000014563	rab4a	92	32.178	ENSPLAG00000020627	zgc:101559	82	32.178
ENSPLAG00000014563	rab4a	74	35.625	ENSPLAG00000022991	rab34a	57	35.625
ENSPLAG00000014563	rab4a	86	44.022	ENSPLAG00000010104	rab18a	89	44.022
ENSPLAG00000014563	rab4a	80	40.588	ENSPLAG00000006354	rab15	80	40.588
ENSPLAG00000014563	rab4a	83	34.078	ENSPLAG00000005074	rab34b	70	34.078
ENSPLAG00000014563	rab4a	99	59.048	ENSPLAG00000004551	-	97	59.048
ENSPLAG00000014563	rab4a	96	47.059	ENSPLAG00000011175	rab11a	94	47.059
ENSPLAG00000014563	rab4a	80	54.386	ENSPLAG00000014207	-	77	54.386
ENSPLAG00000014563	rab4a	89	43.455	ENSPLAG00000019136	rab18b	92	43.455
ENSPLAG00000014563	rab4a	89	35.938	ENSPLAG00000005628	rab42a	88	35.938
ENSPLAG00000014563	rab4a	54	31.092	ENSPLAG00000021807	arl8	63	31.092
ENSPLAG00000014563	rab4a	100	40.000	ENSPLAG00000007237	RAB39B	100	40.000
ENSPLAG00000014563	rab4a	84	37.705	ENSPLAG00000001065	-	88	37.705
ENSPLAG00000014563	rab4a	76	40.373	ENSPLAG00000017232	rab22a	86	41.026
ENSPLAG00000014563	rab4a	76	36.527	ENSPLAG00000005189	rab33a	73	37.195
ENSPLAG00000014563	rab4a	72	30.519	ENSPLAG00000001529	rheb	84	30.519
ENSPLAG00000014563	rab4a	83	45.763	ENSPLAG00000015383	rab30	87	45.763
ENSPLAG00000014563	rab4a	54	33.613	ENSPLAG00000002394	arl5c	63	33.613
ENSPLAG00000014563	rab4a	81	32.386	ENSPLAG00000015650	rhebl1	92	32.386
ENSPLAG00000014563	rab4a	82	38.857	ENSPLAG00000019707	rab6bb	84	38.857
ENSPLAG00000014563	rab4a	77	36.310	ENSPLAG00000007015	rab9a	79	36.310
ENSPLAG00000014563	rab4a	76	34.857	ENSPLAG00000021278	rab33ba	72	34.857
ENSPLAG00000014563	rab4a	81	33.526	ENSPLAG00000009163	rras	87	33.526
ENSPLAG00000014563	rab4a	83	47.159	ENSPLAG00000018655	rab1ba	88	47.159
ENSPLAG00000014563	rab4a	83	46.591	ENSPLAG00000006520	rab1ab	87	46.591
ENSPLAG00000014563	rab4a	77	38.372	ENSPLAG00000011866	rab9b	76	38.372
ENSPLAG00000014563	rab4a	74	41.139	ENSPLAG00000022260	rab6ba	76	41.139
ENSPLAG00000014563	rab4a	77	36.095	ENSPLAG00000006777	-	76	36.095
ENSPLAG00000014563	rab4a	76	43.210	ENSPLAG00000020989	rab35b	80	43.210
ENSPLAG00000014563	rab4a	76	33.333	ENSPLAG00000003379	hrasb	85	33.333
ENSPLAG00000014563	rab4a	86	38.298	ENSPLAG00000007773	si:dkey-34d22.5	85	38.298
ENSPLAG00000014563	rab4a	83	47.727	ENSPLAG00000008004	rab25b	83	47.727
ENSPLAG00000014563	rab4a	81	45.087	ENSPLAG00000005869	zgc:171927	81	45.087
ENSPLAG00000014563	rab4a	72	35.714	ENSPLAG00000011697	rab23	78	35.404
ENSPLAG00000014563	rab4a	76	43.478	ENSPLAG00000004790	rab5c	78	41.860
ENSPLAG00000014563	rab4a	75	55.000	ENSPLAG00000007986	rab11al	74	55.000
ENSPLAG00000014563	rab4a	76	40.373	ENSPLAG00000018718	rab22a	83	40.373
ENSPLAG00000014563	rab4a	76	42.857	ENSPLAG00000016333	-	74	42.857
ENSPLAG00000014563	rab4a	81	33.146	ENSPLAG00000009352	KRAS	93	33.146
ENSPLAG00000014563	rab4a	80	32.749	ENSPLAG00000015685	rabl2	74	32.749
ENSPLAG00000014563	rab4a	83	34.254	ENSPLAG00000019688	si:dkey-13a21.4	88	34.254
ENSPLAG00000014563	rab4a	80	53.801	ENSPLAG00000014243	rab11ba	77	53.801
ENSPLAG00000014563	rab4a	100	36.986	ENSPLAG00000023128	RAB15	100	36.986
ENSPLAG00000014563	rab4a	99	58.571	ENSPLAG00000022515	-	97	58.571
ENSPLAG00000014563	rab4a	100	42.254	ENSPLAG00000015592	-	99	42.254
ENSPLAG00000014563	rab4a	98	53.589	ENSPLAG00000023374	rab2a	98	53.589
ENSPLAG00000014563	rab4a	76	43.478	ENSPLAG00000017838	rab5aa	75	43.478
ENSPLAG00000014563	rab4a	84	37.158	ENSPLAG00000002799	RAB7A	88	37.158
ENSPLAG00000014563	rab4a	68	42.000	ENSPLAG00000016172	-	63	42.667
ENSPLAG00000014563	rab4a	78	40.936	ENSPLAG00000019570	rab6a	82	40.936
ENSPLAG00000014563	rab4a	80	54.386	ENSPLAG00000001598	rab11bb	77	54.386

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000014563	rab4a	100	98.592	ENSCVAG00000010727	rab4a	100	98.592	Cyprinodon_variegatus
ENSPLAG00000014563	rab4a	100	94.366	ENSELUG00000014785	rab4a	100	94.366	Esox_lucius
ENSPLAG00000014563	rab4a	100	99.061	ENSFHEG00000010509	rab4a	100	99.061	Fundulus_heteroclitus
ENSPLAG00000014563	rab4a	100	100.000	ENSGAFG00000005477	rab4a	100	100.000	Gambusia_affinis
ENSPLAG00000014563	rab4a	100	97.196	ENSGACG00000016164	rab4a	98	97.196	Gasterosteus_aculeatus
ENSPLAG00000014563	rab4a	100	99.061	ENSKMAG00000020250	rab4a	100	99.061	Kryptolebias_marmoratus
ENSPLAG00000014563	rab4a	100	98.122	ENSLBEG00000003101	rab4a	100	98.122	Labrus_bergylta
ENSPLAG00000014563	rab4a	100	96.714	ENSMMOG00000015287	rab4a	100	96.714	Mola_mola
ENSPLAG00000014563	rab4a	100	100.000	ENSPFOG00000014630	rab4a	100	100.000	Poecilia_formosa
ENSPLAG00000014563	rab4a	100	100.000	ENSPMEG00000012205	rab4a	100	100.000	Poecilia_mexicana
ENSPLAG00000014563	rab4a	100	100.000	ENSPREG00000010154	rab4a	100	100.000	Poecilia_reticulata
ENSPLAG00000014563	rab4a	100	94.366	ENSSFOG00015015336	rab4a	100	94.366	Scleropages_formosus
ENSPLAG00000014563	rab4a	100	100.000	ENSXMAG00000026193	rab4a	100	100.000	Xiphophorus_maculatus