EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000014653 (Gene tree)
Gene ID: 106949666
Gene Symbol: si:ch73-63e15.2
Alias: -
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 56591 bases
Position: chrKQ545672.1:27442-84032
Accession: 106949666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000011440	ResIII	PF04851.15	1.3e-08	1	1
ENSPLAP00000026617	ResIII	PF04851.15	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000018832	-	3702	-	ENSPLAP00000011448	1233 (aa)	-	-
ENSPLAT00000018816	-	8362	XM_015036075	ENSPLAP00000011440	1494 (aa)	XP_014891561	UPI00072E2C89
ENSPLAT00000018902	-	8263	XM_015036071	ENSPLAP00000026617	1521 (aa)	XP_014891557	-

Gene Model

Click here to download ENSPLAG00000014653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000014653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000014653	si:ch73-63e15.2	65	64.853	ENSPLAG00000015015	sbno1	70	65.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000014653	si:ch73-63e15.2	77	67.723	ENSG00000064932	SBNO2	88	67.836	Homo_sapiens
ENSPLAG00000014653	si:ch73-63e15.2	100	78.788	ENSAPOG00000003185	si:ch73-63e15.2	93	85.869	Acanthochromis_polyacanthus
ENSPLAG00000014653	si:ch73-63e15.2	100	79.484	ENSAOCG00000016581	si:ch73-63e15.2	94	89.402	Amphiprion_ocellaris
ENSPLAG00000014653	si:ch73-63e15.2	100	79.001	ENSAPEG00000008862	si:ch73-63e15.2	100	80.065	Amphiprion_percula
ENSPLAG00000014653	si:ch73-63e15.2	100	76.958	ENSATEG00000023838	si:ch73-63e15.2	95	87.409	Anabas_testudineus
ENSPLAG00000014653	si:ch73-63e15.2	75	72.357	ENSAPLG00000007158	SBNO2	89	72.444	Anas_platyrhynchos
ENSPLAG00000014653	si:ch73-63e15.2	77	67.352	ENSANAG00000026685	SBNO2	89	67.209	Aotus_nancymaae
ENSPLAG00000014653	si:ch73-63e15.2	100	76.615	ENSACLG00000005090	si:ch73-63e15.2	96	76.844	Astatotilapia_calliptera
ENSPLAG00000014653	si:ch73-63e15.2	78	79.500	ENSAMXG00000018868	sbno2a	96	79.876	Astyanax_mexicanus
ENSPLAG00000014653	si:ch73-63e15.2	89	74.548	ENSAMXG00000015881	si:ch73-63e15.2	85	80.973	Astyanax_mexicanus
ENSPLAG00000014653	si:ch73-63e15.2	77	69.139	ENSBTAG00000020780	SBNO2	88	69.723	Bos_taurus
ENSPLAG00000014653	si:ch73-63e15.2	76	69.852	ENSCAFG00000019543	SBNO2	86	68.368	Canis_familiaris
ENSPLAG00000014653	si:ch73-63e15.2	76	69.852	ENSCAFG00020017115	SBNO2	91	68.368	Canis_lupus_dingo
ENSPLAG00000014653	si:ch73-63e15.2	76	69.637	ENSCHIG00000026127	SBNO2	86	69.689	Capra_hircus
ENSPLAG00000014653	si:ch73-63e15.2	75	66.754	ENSCAPG00000005731	SBNO2	94	66.754	Cavia_aperea
ENSPLAG00000014653	si:ch73-63e15.2	76	66.724	ENSCPOG00000007477	SBNO2	87	66.695	Cavia_porcellus
ENSPLAG00000014653	si:ch73-63e15.2	77	67.038	ENSCCAG00000037518	SBNO2	89	67.151	Cebus_capucinus
ENSPLAG00000014653	si:ch73-63e15.2	77	67.921	ENSCATG00000037046	SBNO2	88	67.750	Cercocebus_atys
ENSPLAG00000014653	si:ch73-63e15.2	77	68.263	ENSCLAG00000010178	SBNO2	99	68.963	Chinchilla_lanigera
ENSPLAG00000014653	si:ch73-63e15.2	75	68.217	ENSCSAG00000012317	SBNO2	84	68.562	Chlorocebus_sabaeus
ENSPLAG00000014653	si:ch73-63e15.2	75	70.681	ENSCPBG00000008920	SBNO2	78	84.634	Chrysemys_picta_bellii
ENSPLAG00000014653	si:ch73-63e15.2	73	67.589	ENSCANG00000036745	SBNO2	96	67.411	Colobus_angolensis_palliatus
ENSPLAG00000014653	si:ch73-63e15.2	76	66.898	ENSCGRG00001023960	Sbno2	85	67.098	Cricetulus_griseus_chok1gshd
ENSPLAG00000014653	si:ch73-63e15.2	76	68.225	ENSCGRG00000011984	Sbno2	85	68.426	Cricetulus_griseus_crigri
ENSPLAG00000014653	si:ch73-63e15.2	78	85.264	ENSCSEG00000006856	si:ch73-63e15.2	96	88.349	Cynoglossus_semilaevis
ENSPLAG00000014653	si:ch73-63e15.2	100	83.848	ENSCVAG00000005663	si:ch73-63e15.2	100	83.562	Cyprinodon_variegatus
ENSPLAG00000014653	si:ch73-63e15.2	77	78.522	ENSDARG00000098801	sbno2a	86	78.596	Danio_rerio
ENSPLAG00000014653	si:ch73-63e15.2	83	77.796	ENSDARG00000016188	SBNO2	86	79.239	Danio_rerio
ENSPLAG00000014653	si:ch73-63e15.2	76	68.870	ENSDORG00000002916	Sbno2	85	69.370	Dipodomys_ordii
ENSPLAG00000014653	si:ch73-63e15.2	77	69.152	ENSEASG00005021621	SBNO2	89	69.692	Equus_asinus_asinus
ENSPLAG00000014653	si:ch73-63e15.2	77	68.980	ENSECAG00000011827	SBNO2	89	69.777	Equus_caballus
ENSPLAG00000014653	si:ch73-63e15.2	80	84.117	ENSELUG00000020457	si:ch73-63e15.2	99	71.853	Esox_lucius
ENSPLAG00000014653	si:ch73-63e15.2	76	71.625	ENSFALG00000013988	SBNO2	86	71.019	Ficedula_albicollis
ENSPLAG00000014653	si:ch73-63e15.2	73	67.207	ENSFDAG00000015186	SBNO2	88	66.007	Fukomys_damarensis
ENSPLAG00000014653	si:ch73-63e15.2	100	84.440	ENSFHEG00000022262	si:ch73-63e15.2	100	84.705	Fundulus_heteroclitus
ENSPLAG00000014653	si:ch73-63e15.2	76	85.890	ENSGMOG00000007542	si:ch73-63e15.2	95	85.890	Gadus_morhua
ENSPLAG00000014653	si:ch73-63e15.2	77	72.232	ENSGALG00000037522	SBNO2	85	72.232	Gallus_gallus
ENSPLAG00000014653	si:ch73-63e15.2	79	98.995	ENSGAFG00000004860	si:ch73-63e15.2	93	99.057	Gambusia_affinis
ENSPLAG00000014653	si:ch73-63e15.2	76	88.619	ENSGACG00000013190	si:ch73-63e15.2	96	88.256	Gasterosteus_aculeatus
ENSPLAG00000014653	si:ch73-63e15.2	77	72.458	ENSGAGG00000008348	SBNO2	87	72.373	Gopherus_agassizii
ENSPLAG00000014653	si:ch73-63e15.2	100	76.406	ENSHBUG00000010742	si:ch73-63e15.2	100	76.658	Haplochromis_burtoni
ENSPLAG00000014653	si:ch73-63e15.2	75	68.690	ENSHGLG00000008739	SBNO2	85	68.707	Heterocephalus_glaber_female
ENSPLAG00000014653	si:ch73-63e15.2	77	68.143	ENSHGLG00100005269	SBNO2	99	68.837	Heterocephalus_glaber_male
ENSPLAG00000014653	si:ch73-63e15.2	82	83.442	ENSHCOG00000000884	si:ch73-63e15.2	90	84.372	Hippocampus_comes
ENSPLAG00000014653	si:ch73-63e15.2	79	78.506	ENSIPUG00000000537	si:ch73-63e15.2	87	79.241	Ictalurus_punctatus
ENSPLAG00000014653	si:ch73-63e15.2	80	77.859	ENSIPUG00000019672	sbno2	93	81.118	Ictalurus_punctatus
ENSPLAG00000014653	si:ch73-63e15.2	76	68.435	ENSSTOG00000025832	SBNO2	85	69.025	Ictidomys_tridecemlineatus
ENSPLAG00000014653	si:ch73-63e15.2	76	66.119	ENSJJAG00000017397	Sbno2	85	66.321	Jaculus_jaculus
ENSPLAG00000014653	si:ch73-63e15.2	100	78.762	ENSKMAG00000005541	si:ch73-63e15.2	99	79.012	Kryptolebias_marmoratus
ENSPLAG00000014653	si:ch73-63e15.2	100	76.291	ENSLBEG00000025016	si:ch73-63e15.2	95	88.665	Labrus_bergylta
ENSPLAG00000014653	si:ch73-63e15.2	80	81.955	ENSLOCG00000004643	si:ch73-63e15.2	87	82.532	Lepisosteus_oculatus
ENSPLAG00000014653	si:ch73-63e15.2	75	65.557	ENSLAFG00000008824	SBNO2	89	65.499	Loxodonta_africana
ENSPLAG00000014653	si:ch73-63e15.2	77	66.695	ENSMFAG00000040030	SBNO2	90	66.667	Macaca_fascicularis
ENSPLAG00000014653	si:ch73-63e15.2	75	68.217	ENSMMUG00000010886	SBNO2	89	66.270	Macaca_mulatta
ENSPLAG00000014653	si:ch73-63e15.2	77	68.007	ENSMNEG00000039927	SBNO2	88	67.836	Macaca_nemestrina
ENSPLAG00000014653	si:ch73-63e15.2	68	69.482	ENSMLEG00000038556	SBNO2	90	68.862	Mandrillus_leucophaeus
ENSPLAG00000014653	si:ch73-63e15.2	89	81.765	ENSMAMG00000018758	si:ch73-63e15.2	100	76.741	Mastacembelus_armatus
ENSPLAG00000014653	si:ch73-63e15.2	100	76.221	ENSMZEG00005010682	si:ch73-63e15.2	96	76.701	Maylandia_zebra
ENSPLAG00000014653	si:ch73-63e15.2	77	71.830	ENSMGAG00000003801	SBNO2	90	71.830	Meleagris_gallopavo
ENSPLAG00000014653	si:ch73-63e15.2	76	68.696	ENSMAUG00000008034	Sbno2	85	69.157	Mesocricetus_auratus
ENSPLAG00000014653	si:ch73-63e15.2	77	67.720	ENSMICG00000013071	SBNO2	88	68.539	Microcebus_murinus
ENSPLAG00000014653	si:ch73-63e15.2	75	68.435	ENSMOCG00000010504	Sbno2	85	68.658	Microtus_ochrogaster
ENSPLAG00000014653	si:ch73-63e15.2	76	70.427	ENSMODG00000005382	SBNO2	83	70.427	Monodelphis_domestica
ENSPLAG00000014653	si:ch73-63e15.2	63	82.109	ENSMALG00000021831	si:ch73-63e15.2	99	79.877	Monopterus_albus
ENSPLAG00000014653	si:ch73-63e15.2	76	67.591	ENSMUSG00000035673	Sbno2	93	68.312	Mus_musculus
ENSPLAG00000014653	si:ch73-63e15.2	76	67.678	MGP_PahariEiJ_G0030976	Sbno2	85	68.155	Mus_pahari
ENSPLAG00000014653	si:ch73-63e15.2	76	67.764	MGP_SPRETEiJ_G0016381	Sbno2	90	68.398	Mus_spretus
ENSPLAG00000014653	si:ch73-63e15.2	65	71.385	ENSMPUG00000008747	SBNO2	94	69.700	Mustela_putorius_furo
ENSPLAG00000014653	si:ch73-63e15.2	76	68.111	ENSNGAG00000004308	Sbno2	86	68.111	Nannospalax_galili
ENSPLAG00000014653	si:ch73-63e15.2	81	88.332	ENSNBRG00000022968	si:ch73-63e15.2	99	87.862	Neolamprologus_brichardi
ENSPLAG00000014653	si:ch73-63e15.2	71	69.976	ENSNLEG00000001305	SBNO2	89	69.976	Nomascus_leucogenys
ENSPLAG00000014653	si:ch73-63e15.2	62	66.808	ENSMEUG00000013511	-	78	66.808	Notamacropus_eugenii
ENSPLAG00000014653	si:ch73-63e15.2	74	68.650	ENSOPRG00000017238	SBNO2	94	68.118	Ochotona_princeps
ENSPLAG00000014653	si:ch73-63e15.2	75	67.997	ENSODEG00000011822	SBNO2	86	67.931	Octodon_degus
ENSPLAG00000014653	si:ch73-63e15.2	100	77.469	ENSONIG00000002490	si:ch73-63e15.2	94	87.786	Oreochromis_niloticus
ENSPLAG00000014653	si:ch73-63e15.2	100	76.953	ENSORLG00000000913	si:ch73-63e15.2	100	75.938	Oryzias_latipes
ENSPLAG00000014653	si:ch73-63e15.2	100	76.436	ENSORLG00020010978	si:ch73-63e15.2	100	75.744	Oryzias_latipes_hni
ENSPLAG00000014653	si:ch73-63e15.2	100	77.216	ENSORLG00015000202	si:ch73-63e15.2	100	76.067	Oryzias_latipes_hsok
ENSPLAG00000014653	si:ch73-63e15.2	89	81.484	ENSOMEG00000000359	si:ch73-63e15.2	96	75.969	Oryzias_melastigma
ENSPLAG00000014653	si:ch73-63e15.2	76	66.782	ENSOARG00000011130	SBNO2	87	66.724	Ovis_aries
ENSPLAG00000014653	si:ch73-63e15.2	77	66.723	ENSPPAG00000032482	SBNO2	90	67.126	Pan_paniscus
ENSPLAG00000014653	si:ch73-63e15.2	77	67.637	ENSPTRG00000010185	SBNO2	88	68.045	Pan_troglodytes
ENSPLAG00000014653	si:ch73-63e15.2	77	64.243	ENSPANG00000009658	SBNO2	88	64.328	Papio_anubis
ENSPLAG00000014653	si:ch73-63e15.2	68	79.138	ENSPKIG00000009707	-	84	79.034	Paramormyrops_kingsleyae
ENSPLAG00000014653	si:ch73-63e15.2	91	84.353	ENSPKIG00000024201	si:ch73-63e15.2	85	83.362	Paramormyrops_kingsleyae
ENSPLAG00000014653	si:ch73-63e15.2	64	73.529	ENSPSIG00000002852	SBNO2	99	73.631	Pelodiscus_sinensis
ENSPLAG00000014653	si:ch73-63e15.2	79	83.556	ENSPMGG00000014375	si:ch73-63e15.2	92	83.222	Periophthalmus_magnuspinnatus
ENSPLAG00000014653	si:ch73-63e15.2	76	66.090	ENSPEMG00000024122	Sbno2	85	66.870	Peromyscus_maniculatus_bairdii
ENSPLAG00000014653	si:ch73-63e15.2	77	69.283	ENSPCIG00000011264	SBNO2	83	70.823	Phascolarctos_cinereus
ENSPLAG00000014653	si:ch73-63e15.2	100	99.540	ENSPFOG00000004096	si:ch73-63e15.2	100	95.611	Poecilia_formosa
ENSPLAG00000014653	si:ch73-63e15.2	100	99.015	ENSPMEG00000002129	si:ch73-63e15.2	100	98.997	Poecilia_mexicana
ENSPLAG00000014653	si:ch73-63e15.2	100	97.967	ENSPREG00000006755	si:ch73-63e15.2	96	97.967	Poecilia_reticulata
ENSPLAG00000014653	si:ch73-63e15.2	68	69.335	ENSPCAG00000012256	SBNO2	77	69.335	Procavia_capensis
ENSPLAG00000014653	si:ch73-63e15.2	77	62.128	ENSPCOG00000015216	SBNO2	88	62.521	Propithecus_coquereli
ENSPLAG00000014653	si:ch73-63e15.2	100	76.908	ENSPNYG00000019926	si:ch73-63e15.2	100	76.658	Pundamilia_nyererei
ENSPLAG00000014653	si:ch73-63e15.2	78	82.152	ENSPNAG00000020260	si:ch73-63e15.2	85	81.810	Pygocentrus_nattereri
ENSPLAG00000014653	si:ch73-63e15.2	84	74.729	ENSPNAG00000026609	sbno2a	83	80.549	Pygocentrus_nattereri
ENSPLAG00000014653	si:ch73-63e15.2	76	68.174	ENSRNOG00000013987	Sbno2	89	68.930	Rattus_norvegicus
ENSPLAG00000014653	si:ch73-63e15.2	71	66.728	ENSRBIG00000009740	SBNO2	87	66.851	Rhinopithecus_bieti
ENSPLAG00000014653	si:ch73-63e15.2	67	70.251	ENSRROG00000044671	SBNO2	86	69.773	Rhinopithecus_roxellana
ENSPLAG00000014653	si:ch73-63e15.2	77	67.295	ENSSBOG00000023562	SBNO2	89	67.408	Saimiri_boliviensis_boliviensis
ENSPLAG00000014653	si:ch73-63e15.2	75	70.732	ENSSHAG00000010241	SBNO2	98	70.645	Sarcophilus_harrisii
ENSPLAG00000014653	si:ch73-63e15.2	79	81.134	ENSSFOG00015005861	si:ch73-63e15.2	99	79.673	Scleropages_formosus
ENSPLAG00000014653	si:ch73-63e15.2	100	77.302	ENSSMAG00000012489	si:ch73-63e15.2	100	77.538	Scophthalmus_maximus
ENSPLAG00000014653	si:ch73-63e15.2	100	77.764	ENSSDUG00000003527	si:ch73-63e15.2	100	78.147	Seriola_dumerili
ENSPLAG00000014653	si:ch73-63e15.2	100	77.636	ENSSLDG00000004623	si:ch73-63e15.2	100	77.955	Seriola_lalandi_dorsalis
ENSPLAG00000014653	si:ch73-63e15.2	89	84.050	ENSSPAG00000017717	si:ch73-63e15.2	100	79.935	Stegastes_partitus
ENSPLAG00000014653	si:ch73-63e15.2	77	68.771	ENSSSCG00000030042	SBNO2	90	68.771	Sus_scrofa
ENSPLAG00000014653	si:ch73-63e15.2	74	87.805	ENSTRUG00000018193	si:ch73-63e15.2	87	87.065	Takifugu_rubripes
ENSPLAG00000014653	si:ch73-63e15.2	69	70.009	ENSUAMG00000006568	SBNO2	93	71.247	Ursus_americanus
ENSPLAG00000014653	si:ch73-63e15.2	76	69.765	ENSVVUG00000022823	SBNO2	85	68.368	Vulpes_vulpes
ENSPLAG00000014653	si:ch73-63e15.2	68	76.566	ENSXETG00000021579	sbno2	91	76.566	Xenopus_tropicalis
ENSPLAG00000014653	si:ch73-63e15.2	88	93.968	ENSXCOG00000009209	si:ch73-63e15.2	94	93.968	Xiphophorus_couchianus
ENSPLAG00000014653	si:ch73-63e15.2	100	95.794	ENSXMAG00000012091	si:ch73-63e15.2	100	96.061	Xiphophorus_maculatus