EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000014780 (Gene tree)
Gene ID: 106957131
Gene Symbol: ern1
Alias: -
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 21469 bases
Position: chrKQ545357.1:598889-620357
Accession: 106957131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000011597	Ribonuc_2-5A	PF06479.12	3.8e-40	1	1
ENSPLAP00000011603	Ribonuc_2-5A	PF06479.12	3.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000019043	-	3144	-	ENSPLAP00000011597	1047 (aa)	-	-
ENSPLAT00000019033	-	4801	XM_015048374	ENSPLAP00000011603	1060 (aa)	XP_014903860	UPI00072DC3C0

Gene Model

Click here to download ENSPLAG00000014780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000014780's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000014780	ern1	62	54.054	ENSPLAG00000018226	-	98	65.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000014780	ern1	96	88.986	ENSAPOG00000009999	ern1	95	88.986	Acanthochromis_polyacanthus
ENSPLAG00000014780	ern1	99	86.304	ENSACIG00000021716	ern1	98	86.304	Amphilophus_citrinellus
ENSPLAG00000014780	ern1	94	90.774	ENSAOCG00000012309	ern1	93	90.774	Amphiprion_ocellaris
ENSPLAG00000014780	ern1	96	89.008	ENSAPEG00000011263	ern1	98	92.757	Amphiprion_percula
ENSPLAG00000014780	ern1	99	85.327	ENSATEG00000024468	ern1	94	88.431	Anabas_testudineus
ENSPLAG00000014780	ern1	97	88.506	ENSACLG00000027919	ern1	96	88.506	Astatotilapia_calliptera
ENSPLAG00000014780	ern1	99	79.032	ENSAMXG00000000944	ern1	99	79.032	Astyanax_mexicanus
ENSPLAG00000014780	ern1	91	88.601	ENSCSEG00000014500	ern1	99	86.377	Cynoglossus_semilaevis
ENSPLAG00000014780	ern1	100	91.745	ENSCVAG00000002988	ern1	100	91.745	Cyprinodon_variegatus
ENSPLAG00000014780	ern1	91	81.153	ENSDARG00000013997	ern1	100	81.432	Danio_rerio
ENSPLAG00000014780	ern1	97	77.992	ENSELUG00000005957	ern1	99	77.992	Esox_lucius
ENSPLAG00000014780	ern1	99	91.233	ENSFHEG00000005578	ern1	99	90.952	Fundulus_heteroclitus
ENSPLAG00000014780	ern1	89	86.752	ENSGMOG00000011232	ern1	100	86.752	Gadus_morhua
ENSPLAG00000014780	ern1	100	97.547	ENSGAFG00000020231	ern1	100	97.547	Gambusia_affinis
ENSPLAG00000014780	ern1	89	90.278	ENSGACG00000011700	ern1	97	90.278	Gasterosteus_aculeatus
ENSPLAG00000014780	ern1	96	88.304	ENSHBUG00000012581	ern1	95	88.900	Haplochromis_burtoni
ENSPLAG00000014780	ern1	90	87.643	ENSHCOG00000016199	ern1	91	87.643	Hippocampus_comes
ENSPLAG00000014780	ern1	99	77.989	ENSIPUG00000011083	ern1	98	77.989	Ictalurus_punctatus
ENSPLAG00000014780	ern1	99	86.282	ENSKMAG00000019499	ern1	98	86.377	Kryptolebias_marmoratus
ENSPLAG00000014780	ern1	97	83.285	ENSLBEG00000025907	ern1	99	81.623	Labrus_bergylta
ENSPLAG00000014780	ern1	99	85.421	ENSMAMG00000023439	ern1	98	86.342	Mastacembelus_armatus
ENSPLAG00000014780	ern1	97	88.506	ENSMZEG00005003221	ern1	96	88.506	Maylandia_zebra
ENSPLAG00000014780	ern1	91	89.231	ENSMMOG00000007650	ern1	97	89.231	Mola_mola
ENSPLAG00000014780	ern1	91	90.574	ENSMALG00000017775	ern1	89	90.574	Monopterus_albus
ENSPLAG00000014780	ern1	96	88.998	ENSNBRG00000002179	ern1	95	88.998	Neolamprologus_brichardi
ENSPLAG00000014780	ern1	90	91.314	ENSONIG00000017169	ern1	99	90.377	Oreochromis_niloticus
ENSPLAG00000014780	ern1	99	84.133	ENSORLG00000008940	ern1	100	84.986	Oryzias_latipes
ENSPLAG00000014780	ern1	99	83.948	ENSORLG00020018387	ern1	100	84.801	Oryzias_latipes_hni
ENSPLAG00000014780	ern1	99	83.749	ENSORLG00015007946	ern1	100	84.601	Oryzias_latipes_hsok
ENSPLAG00000014780	ern1	99	85.343	ENSOMEG00000011741	ern1	100	85.343	Oryzias_melastigma
ENSPLAG00000014780	ern1	90	83.281	ENSPKIG00000005593	ern1	97	83.281	Paramormyrops_kingsleyae
ENSPLAG00000014780	ern1	92	88.469	ENSPMGG00000020442	ern1	97	86.486	Periophthalmus_magnuspinnatus
ENSPLAG00000014780	ern1	100	99.623	ENSPFOG00000007378	ern1	100	99.623	Poecilia_formosa
ENSPLAG00000014780	ern1	100	99.528	ENSPMEG00000016324	ern1	100	99.528	Poecilia_mexicana
ENSPLAG00000014780	ern1	100	98.679	ENSPREG00000006286	ern1	100	98.679	Poecilia_reticulata
ENSPLAG00000014780	ern1	97	88.506	ENSPNYG00000017929	ern1	98	90.575	Pundamilia_nyererei
ENSPLAG00000014780	ern1	98	80.478	ENSPNAG00000029447	ern1	99	80.792	Pygocentrus_nattereri
ENSPLAG00000014780	ern1	98	85.038	ENSSMAG00000015042	ern1	96	85.038	Scophthalmus_maximus
ENSPLAG00000014780	ern1	99	87.256	ENSSDUG00000009098	ern1	98	87.256	Seriola_dumerili
ENSPLAG00000014780	ern1	99	87.163	ENSSLDG00000023254	ern1	98	87.163	Seriola_lalandi_dorsalis
ENSPLAG00000014780	ern1	96	89.234	ENSSPAG00000017539	ern1	95	89.234	Stegastes_partitus
ENSPLAG00000014780	ern1	95	86.259	ENSTRUG00000001041	ern1	96	86.259	Takifugu_rubripes
ENSPLAG00000014780	ern1	89	90.822	ENSTNIG00000017990	ern1	99	90.105	Tetraodon_nigroviridis
ENSPLAG00000014780	ern1	99	94.385	ENSXCOG00000010330	ern1	97	98.974	Xiphophorus_couchianus
ENSPLAG00000014780	ern1	100	97.736	ENSXMAG00000001310	ern1	100	97.736	Xiphophorus_maculatus