EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000014829 (Gene tree)
Gene ID: -
Gene Symbol: stau1
Alias: -
Full Name: double-stranded RNA-binding protein Staufen homolog 1-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 2890 bases
Position: chrKQ548656.1:99-2988
Accession: 106940862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000026752	dsrm	PF00035.26	3.1e-48	1	4
ENSPLAP00000026752	dsrm	PF00035.26	3.1e-48	2	4
ENSPLAP00000026752	dsrm	PF00035.26	3.1e-48	3	4
ENSPLAP00000026752	dsrm	PF00035.26	3.1e-48	4	4
ENSPLAP00000011647	dsrm	PF00035.26	1.8e-41	1	3
ENSPLAP00000011647	dsrm	PF00035.26	1.8e-41	2	3
ENSPLAP00000011647	dsrm	PF00035.26	1.8e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000019101	-	1173	XM_015023718	ENSPLAP00000011647	390 (aa)	XP_014879204	-
ENSPLAT00000019072	-	1368	-	ENSPLAP00000026752	455 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000014829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000014829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000014829	stau1	62	44.622	ENSPLAG00000009029	stau2	59	55.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000014829	stau1	81	70.552	ENSG00000124214	STAU1	95	64.767	Homo_sapiens
ENSPLAG00000014829	stau1	97	83.805	ENSAPOG00000017260	stau1	58	89.059	Acanthochromis_polyacanthus
ENSPLAG00000014829	stau1	96	68.848	ENSAMEG00000013681	STAU1	56	70.886	Ailuropoda_melanoleuca
ENSPLAG00000014829	stau1	97	81.088	ENSACIG00000015918	stau1	57	85.570	Amphilophus_citrinellus
ENSPLAG00000014829	stau1	97	83.805	ENSAOCG00000012224	stau1	57	87.282	Amphiprion_ocellaris
ENSPLAG00000014829	stau1	97	84.062	ENSAPEG00000012308	stau1	57	87.282	Amphiprion_percula
ENSPLAG00000014829	stau1	97	83.333	ENSATEG00000024600	stau1	60	86.318	Anabas_testudineus
ENSPLAG00000014829	stau1	97	69.720	ENSAPLG00000010527	STAU1	56	73.317	Anas_platyrhynchos
ENSPLAG00000014829	stau1	97	69.466	ENSACAG00000015909	STAU1	57	73.317	Anolis_carolinensis
ENSPLAG00000014829	stau1	81	68.976	ENSANAG00000032714	STAU1	56	70.036	Aotus_nancymaae
ENSPLAG00000014829	stau1	97	81.538	ENSACLG00000012270	stau1	58	84.826	Astatotilapia_calliptera
ENSPLAG00000014829	stau1	91	70.219	ENSAMXG00000016812	stau1	62	68.937	Astyanax_mexicanus
ENSPLAG00000014829	stau1	81	70.245	ENSBTAG00000000241	STAU1	56	69.018	Bos_taurus
ENSPLAG00000014829	stau1	85	68.328	ENSCJAG00000016233	STAU1	56	68.405	Callithrix_jacchus
ENSPLAG00000014829	stau1	96	67.949	ENSCAFG00000011347	STAU1	59	70.149	Canis_familiaris
ENSPLAG00000014829	stau1	96	67.949	ENSCAFG00020017123	STAU1	66	70.149	Canis_lupus_dingo
ENSPLAG00000014829	stau1	81	69.939	ENSCHIG00000001799	-	56	68.405	Capra_hircus
ENSPLAG00000014829	stau1	81	70.245	ENSTSYG00000036179	-	56	68.405	Carlito_syrichta
ENSPLAG00000014829	stau1	79	69.427	ENSCAPG00000017041	STAU1	62	67.834	Cavia_aperea
ENSPLAG00000014829	stau1	77	69.427	ENSCPOG00000005566	STAU1	65	67.516	Cavia_porcellus
ENSPLAG00000014829	stau1	81	68.976	ENSCCAG00000034339	STAU1	56	67.169	Cebus_capucinus
ENSPLAG00000014829	stau1	81	70.552	ENSCATG00000028474	STAU1	63	67.081	Cercocebus_atys
ENSPLAG00000014829	stau1	79	56.962	ENSCLAG00000002784	-	63	55.063	Chinchilla_lanigera
ENSPLAG00000014829	stau1	77	69.745	ENSCLAG00000006516	-	63	67.834	Chinchilla_lanigera
ENSPLAG00000014829	stau1	80	69.688	ENSCSAG00000014986	STAU1	64	67.812	Chlorocebus_sabaeus
ENSPLAG00000014829	stau1	81	70.336	ENSCHOG00000001511	STAU1	56	68.196	Choloepus_hoffmanni
ENSPLAG00000014829	stau1	97	69.543	ENSCPBG00000026741	STAU1	64	68.243	Chrysemys_picta_bellii
ENSPLAG00000014829	stau1	81	70.859	ENSCANG00000039220	STAU1	56	69.018	Colobus_angolensis_palliatus
ENSPLAG00000014829	stau1	77	66.558	ENSCGRG00001013453	Stau1	70	64.935	Cricetulus_griseus_chok1gshd
ENSPLAG00000014829	stau1	77	65.287	ENSCGRG00000007216	Stau1	63	63.376	Cricetulus_griseus_crigri
ENSPLAG00000014829	stau1	98	69.487	ENSCSEG00000000792	stau1	55	73.710	Cynoglossus_semilaevis
ENSPLAG00000014829	stau1	88	76.323	ENSCVAG00000005906	stau1	64	78.830	Cyprinodon_variegatus
ENSPLAG00000014829	stau1	96	75.389	ENSDARG00000044182	stau1	61	83.486	Danio_rerio
ENSPLAG00000014829	stau1	81	70.031	ENSDNOG00000014933	STAU1	55	68.807	Dasypus_novemcinctus
ENSPLAG00000014829	stau1	76	69.055	ENSDORG00000030220	Stau1	62	67.101	Dipodomys_ordii
ENSPLAG00000014829	stau1	96	68.299	ENSEASG00005023343	STAU1	74	67.949	Equus_asinus_asinus
ENSPLAG00000014829	stau1	96	69.713	ENSECAG00000012894	STAU1	65	68.668	Equus_caballus
ENSPLAG00000014829	stau1	96	76.531	ENSELUG00000002529	stau1	66	76.168	Esox_lucius
ENSPLAG00000014829	stau1	96	68.123	ENSFCAG00000001447	STAU1	59	69.900	Felis_catus
ENSPLAG00000014829	stau1	97	71.318	ENSFALG00000012940	STAU1	57	74.937	Ficedula_albicollis
ENSPLAG00000014829	stau1	76	57.047	ENSFDAG00000020837	-	56	58.712	Fukomys_damarensis
ENSPLAG00000014829	stau1	78	68.553	ENSFDAG00000014119	-	63	66.352	Fukomys_damarensis
ENSPLAG00000014829	stau1	97	86.923	ENSFHEG00000013517	stau1	58	90.050	Fundulus_heteroclitus
ENSPLAG00000014829	stau1	96	75.062	ENSGMOG00000016850	stau1	60	75.058	Gadus_morhua
ENSPLAG00000014829	stau1	97	70.801	ENSGALG00000004736	STAU1	57	74.430	Gallus_gallus
ENSPLAG00000014829	stau1	97	94.359	ENSGAFG00000010437	stau1	58	93.781	Gambusia_affinis
ENSPLAG00000014829	stau1	96	83.586	ENSGACG00000001352	stau1	58	86.352	Gasterosteus_aculeatus
ENSPLAG00000014829	stau1	97	70.361	ENSGAGG00000009825	STAU1	57	74.430	Gopherus_agassizii
ENSPLAG00000014829	stau1	79	68.944	ENSGGOG00000025351	STAU1	63	67.081	Gorilla_gorilla
ENSPLAG00000014829	stau1	97	81.282	ENSHBUG00000023668	stau1	58	84.577	Haplochromis_burtoni
ENSPLAG00000014829	stau1	77	70.455	ENSHGLG00000008730	STAU1	62	68.506	Heterocephalus_glaber_female
ENSPLAG00000014829	stau1	77	70.455	ENSHGLG00100000098	STAU1	62	68.506	Heterocephalus_glaber_male
ENSPLAG00000014829	stau1	97	77.320	ENSHCOG00000018461	stau1	58	81.546	Hippocampus_comes
ENSPLAG00000014829	stau1	96	75.000	ENSIPUG00000023725	stau1	60	77.136	Ictalurus_punctatus
ENSPLAG00000014829	stau1	77	69.805	ENSSTOG00000003634	STAU1	62	67.857	Ictidomys_tridecemlineatus
ENSPLAG00000014829	stau1	78	66.026	ENSJJAG00000020032	Stau1	63	65.705	Jaculus_jaculus
ENSPLAG00000014829	stau1	97	81.912	ENSKMAG00000007135	stau1	57	88.131	Kryptolebias_marmoratus
ENSPLAG00000014829	stau1	97	82.776	ENSLBEG00000020172	stau1	57	84.539	Labrus_bergylta
ENSPLAG00000014829	stau1	96	74.677	ENSLACG00000016157	STAU1	57	74.447	Latimeria_chalumnae
ENSPLAG00000014829	stau1	97	74.419	ENSLOCG00000003134	stau1	57	80.101	Lepisosteus_oculatus
ENSPLAG00000014829	stau1	81	71.166	ENSLAFG00000003238	STAU1	63	69.632	Loxodonta_africana
ENSPLAG00000014829	stau1	81	70.552	ENSMFAG00000040931	STAU1	63	67.081	Macaca_fascicularis
ENSPLAG00000014829	stau1	79	68.944	ENSMMUG00000002302	STAU1	73	63.918	Macaca_mulatta
ENSPLAG00000014829	stau1	81	70.552	ENSMNEG00000033821	STAU1	63	67.081	Macaca_nemestrina
ENSPLAG00000014829	stau1	81	70.552	ENSMLEG00000031383	STAU1	56	68.712	Mandrillus_leucophaeus
ENSPLAG00000014829	stau1	97	83.290	ENSMAMG00000017586	stau1	60	86.284	Mastacembelus_armatus
ENSPLAG00000014829	stau1	97	81.748	ENSMZEG00005015605	stau1	58	85.037	Maylandia_zebra
ENSPLAG00000014829	stau1	97	69.720	ENSMGAG00000004719	STAU1	56	73.317	Meleagris_gallopavo
ENSPLAG00000014829	stau1	77	65.605	ENSMAUG00000013846	Stau1	63	63.694	Mesocricetus_auratus
ENSPLAG00000014829	stau1	81	68.373	ENSMICG00000001995	STAU1	56	67.169	Microcebus_murinus
ENSPLAG00000014829	stau1	77	67.647	ENSMOCG00000018743	Stau1	63	64.013	Microtus_ochrogaster
ENSPLAG00000014829	stau1	97	82.776	ENSMMOG00000015455	stau1	59	87.197	Mola_mola
ENSPLAG00000014829	stau1	96	71.728	ENSMODG00000016276	STAU1	59	73.924	Monodelphis_domestica
ENSPLAG00000014829	stau1	97	82.519	ENSMALG00000000045	stau1	57	85.536	Monopterus_albus
ENSPLAG00000014829	stau1	77	66.667	MGP_CAROLIEiJ_G0024699	Stau1	71	63.376	Mus_caroli
ENSPLAG00000014829	stau1	77	66.667	ENSMUSG00000039536	Stau1	71	63.376	Mus_musculus
ENSPLAG00000014829	stau1	77	66.013	MGP_PahariEiJ_G0026141	Stau1	71	62.420	Mus_pahari
ENSPLAG00000014829	stau1	75	67.442	MGP_SPRETEiJ_G0025619	Stau1	71	63.057	Mus_spretus
ENSPLAG00000014829	stau1	96	68.586	ENSMPUG00000017581	STAU1	59	70.633	Mustela_putorius_furo
ENSPLAG00000014829	stau1	82	68.389	ENSMLUG00000008407	STAU1	55	66.869	Myotis_lucifugus
ENSPLAG00000014829	stau1	77	67.197	ENSNGAG00000007108	Stau1	63	65.605	Nannospalax_galili
ENSPLAG00000014829	stau1	97	81.282	ENSNBRG00000017596	stau1	58	84.577	Neolamprologus_brichardi
ENSPLAG00000014829	stau1	81	69.018	ENSNLEG00000006955	STAU1	63	67.081	Nomascus_leucogenys
ENSPLAG00000014829	stau1	95	63.483	ENSOPRG00000014569	STAU1	61	62.079	Ochotona_princeps
ENSPLAG00000014829	stau1	79	71.656	ENSODEG00000006523	STAU1	63	70.382	Octodon_degus
ENSPLAG00000014829	stau1	96	81.491	ENSONIG00000004152	stau1	58	80.952	Oreochromis_niloticus
ENSPLAG00000014829	stau1	96	68.299	ENSOANG00000006394	STAU1	57	72.070	Ornithorhynchus_anatinus
ENSPLAG00000014829	stau1	81	69.018	ENSOCUG00000006214	STAU1	56	67.485	Oryctolagus_cuniculus
ENSPLAG00000014829	stau1	96	80.928	ENSOMEG00000002388	stau1	58	85.323	Oryzias_melastigma
ENSPLAG00000014829	stau1	81	70.245	ENSOGAG00000002127	STAU1	54	68.098	Otolemur_garnettii
ENSPLAG00000014829	stau1	79	42.947	ENSOGAG00000028222	-	61	40.810	Otolemur_garnettii
ENSPLAG00000014829	stau1	96	69.110	ENSOARG00000012204	STAU1	59	70.886	Ovis_aries
ENSPLAG00000014829	stau1	79	68.944	ENSPPAG00000032023	STAU1	63	67.081	Pan_paniscus
ENSPLAG00000014829	stau1	81	70.552	ENSPPRG00000003436	STAU1	63	68.671	Panthera_pardus
ENSPLAG00000014829	stau1	81	70.552	ENSPTIG00000011768	STAU1	65	67.492	Panthera_tigris_altaica
ENSPLAG00000014829	stau1	79	68.944	ENSPTRG00000023130	STAU1	63	67.081	Pan_troglodytes
ENSPLAG00000014829	stau1	81	70.552	ENSPANG00000020560	STAU1	56	68.712	Papio_anubis
ENSPLAG00000014829	stau1	97	74.419	ENSPKIG00000024588	stau1	57	79.798	Paramormyrops_kingsleyae
ENSPLAG00000014829	stau1	97	70.876	ENSPSIG00000010731	STAU1	63	69.406	Pelodiscus_sinensis
ENSPLAG00000014829	stau1	96	81.912	ENSPMGG00000018553	stau1	63	84.932	Periophthalmus_magnuspinnatus
ENSPLAG00000014829	stau1	77	65.605	ENSPEMG00000022045	Stau1	63	63.694	Peromyscus_maniculatus_bairdii
ENSPLAG00000014829	stau1	96	70.757	ENSPCIG00000023269	STAU1	72	68.153	Phascolarctos_cinereus
ENSPLAG00000014829	stau1	97	96.410	ENSPFOG00000017253	stau1	58	95.522	Poecilia_formosa
ENSPLAG00000014829	stau1	97	96.154	ENSPMEG00000007495	stau1	59	95.522	Poecilia_mexicana
ENSPLAG00000014829	stau1	97	95.128	ENSPREG00000003477	stau1	58	94.527	Poecilia_reticulata
ENSPLAG00000014829	stau1	81	70.552	ENSPPYG00000011111	STAU1	56	68.712	Pongo_abelii
ENSPLAG00000014829	stau1	81	69.939	ENSPCOG00000027746	STAU1	63	66.149	Propithecus_coquereli
ENSPLAG00000014829	stau1	97	81.282	ENSPNYG00000014436	stau1	58	84.577	Pundamilia_nyererei
ENSPLAG00000014829	stau1	96	75.578	ENSPNAG00000011323	stau1	64	74.634	Pygocentrus_nattereri
ENSPLAG00000014829	stau1	77	64.968	ENSRNOG00000007781	Stau1	63	63.376	Rattus_norvegicus
ENSPLAG00000014829	stau1	79	70.347	ENSRBIG00000037345	STAU1	63	69.085	Rhinopithecus_bieti
ENSPLAG00000014829	stau1	81	70.552	ENSRROG00000039008	STAU1	63	69.085	Rhinopithecus_roxellana
ENSPLAG00000014829	stau1	82	69.697	ENSSBOG00000034448	STAU1	60	69.178	Saimiri_boliviensis_boliviensis
ENSPLAG00000014829	stau1	96	71.466	ENSSHAG00000009492	STAU1	59	73.671	Sarcophilus_harrisii
ENSPLAG00000014829	stau1	96	78.125	ENSSFOG00015021497	stau1	57	80.556	Scleropages_formosus
ENSPLAG00000014829	stau1	96	83.463	ENSSMAG00000017410	stau1	64	79.551	Scophthalmus_maximus
ENSPLAG00000014829	stau1	97	83.805	ENSSDUG00000019439	stau1	57	87.032	Seriola_dumerili
ENSPLAG00000014829	stau1	97	83.805	ENSSLDG00000025040	stau1	61	87.032	Seriola_lalandi_dorsalis
ENSPLAG00000014829	stau1	97	69.898	ENSSPUG00000017983	STAU1	60	73.067	Sphenodon_punctatus
ENSPLAG00000014829	stau1	97	84.319	ENSSPAG00000019275	stau1	57	87.282	Stegastes_partitus
ENSPLAG00000014829	stau1	96	69.634	ENSSSCG00000027444	STAU1	66	71.646	Sus_scrofa
ENSPLAG00000014829	stau1	97	69.543	ENSTGUG00000008784	STAU1	56	73.134	Taeniopygia_guttata
ENSPLAG00000014829	stau1	96	81.395	ENSTRUG00000005837	stau1	58	86.650	Takifugu_rubripes
ENSPLAG00000014829	stau1	96	80.928	ENSTNIG00000014732	stau1	59	83.541	Tetraodon_nigroviridis
ENSPLAG00000014829	stau1	81	70.552	ENSTBEG00000009404	STAU1	56	68.405	Tupaia_belangeri
ENSPLAG00000014829	stau1	79	68.111	ENSUAMG00000025449	STAU1	74	66.987	Ursus_americanus
ENSPLAG00000014829	stau1	79	68.111	ENSUMAG00000024475	STAU1	75	66.873	Ursus_maritimus
ENSPLAG00000014829	stau1	81	70.245	ENSVPAG00000001313	STAU1	56	69.018	Vicugna_pacos
ENSPLAG00000014829	stau1	96	67.949	ENSVVUG00000022325	STAU1	59	70.149	Vulpes_vulpes
ENSPLAG00000014829	stau1	96	66.057	ENSXETG00000001783	stau1	57	71.033	Xenopus_tropicalis
ENSPLAG00000014829	stau1	89	95.087	ENSXCOG00000008804	stau1	98	92.987	Xiphophorus_couchianus
ENSPLAG00000014829	stau1	97	93.590	ENSXMAG00000016175	stau1	58	93.284	Xiphophorus_maculatus