EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000014847 (Gene tree)
Gene ID: 106957593
Gene Symbol: tsen54
Alias: -
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 8488 bases
Position: chrKQ546232.1:206086-214573
Accession: 106957593
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000011695	tRNA_int_end_N2	PF12928.7	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000019155	-	2678	XM_015048980	ENSPLAP00000011695	496 (aa)	XP_014904466	UPI00072DCEFD

Gene Model

Click here to download ENSPLAG00000014847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000014847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000014847	tsen54	99	47.358	ENSG00000182173	TSEN54	100	65.278	Homo_sapiens
ENSPLAG00000014847	tsen54	100	72.495	ENSAPOG00000009659	tsen54	100	70.732	Acanthochromis_polyacanthus
ENSPLAG00000014847	tsen54	95	47.266	ENSAMEG00000009414	TSEN54	96	46.850	Ailuropoda_melanoleuca
ENSPLAG00000014847	tsen54	100	71.906	ENSAOCG00000000152	tsen54	98	71.906	Amphiprion_ocellaris
ENSPLAG00000014847	tsen54	100	71.906	ENSAPEG00000018931	tsen54	98	71.906	Amphiprion_percula
ENSPLAG00000014847	tsen54	100	67.170	ENSATEG00000019860	tsen54	100	68.113	Anabas_testudineus
ENSPLAG00000014847	tsen54	85	47.692	ENSAPLG00000009419	TSEN54	99	47.473	Anas_platyrhynchos
ENSPLAG00000014847	tsen54	99	47.519	ENSACAG00000006714	TSEN54	99	47.710	Anolis_carolinensis
ENSPLAG00000014847	tsen54	96	48.350	ENSANAG00000024061	TSEN54	98	46.958	Aotus_nancymaae
ENSPLAG00000014847	tsen54	100	69.290	ENSACLG00000019800	tsen54	100	69.290	Astatotilapia_calliptera
ENSPLAG00000014847	tsen54	97	58.384	ENSAMXG00000006546	tsen54	97	58.384	Astyanax_mexicanus
ENSPLAG00000014847	tsen54	96	47.860	ENSBTAG00000000824	TSEN54	97	47.961	Bos_taurus
ENSPLAG00000014847	tsen54	96	47.389	ENSCJAG00000014278	TSEN54	98	48.008	Callithrix_jacchus
ENSPLAG00000014847	tsen54	99	46.717	ENSCAFG00000004798	TSEN54	99	47.070	Canis_familiaris
ENSPLAG00000014847	tsen54	99	46.717	ENSCAFG00020000312	TSEN54	99	47.070	Canis_lupus_dingo
ENSPLAG00000014847	tsen54	96	47.843	ENSCHIG00000019908	TSEN54	97	47.843	Capra_hircus
ENSPLAG00000014847	tsen54	85	46.070	ENSTSYG00000037439	TSEN54	99	46.070	Carlito_syrichta
ENSPLAG00000014847	tsen54	96	47.184	ENSCCAG00000036624	TSEN54	98	47.467	Cebus_capucinus
ENSPLAG00000014847	tsen54	96	48.077	ENSCATG00000042877	TSEN54	98	47.736	Cercocebus_atys
ENSPLAG00000014847	tsen54	96	48.748	ENSCLAG00000002924	TSEN54	96	48.170	Chinchilla_lanigera
ENSPLAG00000014847	tsen54	99	46.893	ENSCSAG00000004809	TSEN54	99	47.081	Chlorocebus_sabaeus
ENSPLAG00000014847	tsen54	97	48.842	ENSCPBG00000028071	TSEN54	98	48.263	Chrysemys_picta_bellii
ENSPLAG00000014847	tsen54	99	47.015	ENSCANG00000028053	TSEN54	99	46.753	Colobus_angolensis_palliatus
ENSPLAG00000014847	tsen54	99	46.269	ENSCGRG00001020029	Tsen54	99	46.168	Cricetulus_griseus_chok1gshd
ENSPLAG00000014847	tsen54	83	45.475	ENSCGRG00000016289	Tsen54	99	45.354	Cricetulus_griseus_crigri
ENSPLAG00000014847	tsen54	80	55.797	ENSCSEG00000020586	tsen54	99	55.797	Cynoglossus_semilaevis
ENSPLAG00000014847	tsen54	80	57.816	ENSDARG00000036844	tsen54	100	58.416	Danio_rerio
ENSPLAG00000014847	tsen54	99	45.779	ENSDNOG00000018452	TSEN54	99	46.182	Dasypus_novemcinctus
ENSPLAG00000014847	tsen54	96	47.843	ENSDORG00000004073	Tsen54	97	48.054	Dipodomys_ordii
ENSPLAG00000014847	tsen54	95	32.692	ENSEBUG00000005203	TSEN54	94	32.692	Eptatretus_burgeri
ENSPLAG00000014847	tsen54	99	47.826	ENSEASG00005000579	TSEN54	99	47.448	Equus_asinus_asinus
ENSPLAG00000014847	tsen54	99	47.259	ENSECAG00000004924	TSEN54	99	46.881	Equus_caballus
ENSPLAG00000014847	tsen54	85	45.415	ENSEEUG00000008467	TSEN54	99	46.320	Erinaceus_europaeus
ENSPLAG00000014847	tsen54	99	57.904	ENSELUG00000017703	tsen54	92	58.088	Esox_lucius
ENSPLAG00000014847	tsen54	96	47.276	ENSFCAG00000023712	TSEN54	97	48.356	Felis_catus
ENSPLAG00000014847	tsen54	93	49.080	ENSFALG00000001119	TSEN54	92	48.466	Ficedula_albicollis
ENSPLAG00000014847	tsen54	85	47.817	ENSFDAG00000019090	TSEN54	99	47.817	Fukomys_damarensis
ENSPLAG00000014847	tsen54	100	82.016	ENSFHEG00000005470	tsen54	100	82.016	Fundulus_heteroclitus
ENSPLAG00000014847	tsen54	84	59.375	ENSGMOG00000013146	tsen54	99	59.375	Gadus_morhua
ENSPLAG00000014847	tsen54	96	44.314	ENSGALG00000047163	TSEN54	99	44.118	Gallus_gallus
ENSPLAG00000014847	tsen54	100	92.339	ENSGAFG00000005111	tsen54	100	92.339	Gambusia_affinis
ENSPLAG00000014847	tsen54	96	65.510	ENSGACG00000014987	tsen54	100	65.306	Gasterosteus_aculeatus
ENSPLAG00000014847	tsen54	97	49.320	ENSGAGG00000006825	TSEN54	96	49.035	Gopherus_agassizii
ENSPLAG00000014847	tsen54	95	47.937	ENSGGOG00000009417	TSEN54	99	47.843	Gorilla_gorilla
ENSPLAG00000014847	tsen54	90	68.365	ENSHBUG00000018296	tsen54	92	68.365	Haplochromis_burtoni
ENSPLAG00000014847	tsen54	99	47.477	ENSHGLG00000007979	TSEN54	99	47.103	Heterocephalus_glaber_female
ENSPLAG00000014847	tsen54	99	46.542	ENSHGLG00100005497	TSEN54	99	46.168	Heterocephalus_glaber_male
ENSPLAG00000014847	tsen54	80	66.176	ENSHCOG00000007481	tsen54	100	66.667	Hippocampus_comes
ENSPLAG00000014847	tsen54	98	51.587	ENSIPUG00000000590	tsen54	97	51.389	Ictalurus_punctatus
ENSPLAG00000014847	tsen54	98	46.667	ENSSTOG00000012883	TSEN54	98	46.667	Ictidomys_tridecemlineatus
ENSPLAG00000014847	tsen54	99	46.555	ENSJJAG00000007365	Tsen54	99	46.555	Jaculus_jaculus
ENSPLAG00000014847	tsen54	100	71.023	ENSKMAG00000006944	tsen54	100	70.833	Kryptolebias_marmoratus
ENSPLAG00000014847	tsen54	100	65.962	ENSLBEG00000004199	tsen54	100	65.962	Labrus_bergylta
ENSPLAG00000014847	tsen54	96	43.327	ENSLACG00000009497	TSEN54	99	43.327	Latimeria_chalumnae
ENSPLAG00000014847	tsen54	97	55.405	ENSLOCG00000011191	tsen54	97	55.212	Lepisosteus_oculatus
ENSPLAG00000014847	tsen54	92	47.336	ENSLAFG00000011655	TSEN54	92	47.336	Loxodonta_africana
ENSPLAG00000014847	tsen54	99	46.893	ENSMFAG00000000712	TSEN54	99	47.081	Macaca_fascicularis
ENSPLAG00000014847	tsen54	99	46.904	ENSMNEG00000029199	TSEN54	99	47.081	Macaca_nemestrina
ENSPLAG00000014847	tsen54	85	46.272	ENSMLEG00000044168	TSEN54	88	46.389	Mandrillus_leucophaeus
ENSPLAG00000014847	tsen54	100	70.392	ENSMAMG00000019773	tsen54	100	70.392	Mastacembelus_armatus
ENSPLAG00000014847	tsen54	100	69.098	ENSMZEG00005000884	tsen54	100	69.098	Maylandia_zebra
ENSPLAG00000014847	tsen54	92	43.838	ENSMGAG00000009556	TSEN54	92	44.758	Meleagris_gallopavo
ENSPLAG00000014847	tsen54	99	47.378	ENSMAUG00000016838	Tsen54	99	47.004	Mesocricetus_auratus
ENSPLAG00000014847	tsen54	99	48.062	ENSMICG00000044012	TSEN54	99	48.444	Microcebus_murinus
ENSPLAG00000014847	tsen54	99	47.719	ENSMOCG00000021585	Tsen54	99	47.148	Microtus_ochrogaster
ENSPLAG00000014847	tsen54	96	63.860	ENSMMOG00000020189	tsen54	99	64.887	Mola_mola
ENSPLAG00000014847	tsen54	96	45.594	ENSMODG00000007438	TSEN54	95	45.594	Monodelphis_domestica
ENSPLAG00000014847	tsen54	99	69.290	ENSMALG00000020573	tsen54	99	69.423	Monopterus_albus
ENSPLAG00000014847	tsen54	99	45.779	MGP_CAROLIEiJ_G0017417	Tsen54	99	45.403	Mus_caroli
ENSPLAG00000014847	tsen54	99	47.070	ENSMUSG00000020781	Tsen54	99	46.692	Mus_musculus
ENSPLAG00000014847	tsen54	99	46.341	MGP_PahariEiJ_G0018547	Tsen54	99	45.966	Mus_pahari
ENSPLAG00000014847	tsen54	99	47.070	MGP_SPRETEiJ_G0018262	Tsen54	99	46.692	Mus_spretus
ENSPLAG00000014847	tsen54	99	44.195	ENSMPUG00000013870	TSEN54	99	44.569	Mustela_putorius_furo
ENSPLAG00000014847	tsen54	96	47.485	ENSMLUG00000015298	TSEN54	96	47.284	Myotis_lucifugus
ENSPLAG00000014847	tsen54	96	48.708	ENSNGAG00000015673	Tsen54	97	48.111	Nannospalax_galili
ENSPLAG00000014847	tsen54	88	42.675	ENSMEUG00000011908	TSEN54	99	42.675	Notamacropus_eugenii
ENSPLAG00000014847	tsen54	96	45.328	ENSOPRG00000012513	TSEN54	96	45.129	Ochotona_princeps
ENSPLAG00000014847	tsen54	100	68.391	ENSONIG00000009543	tsen54	100	68.391	Oreochromis_niloticus
ENSPLAG00000014847	tsen54	99	43.962	ENSOCUG00000009875	TSEN54	99	44.177	Oryctolagus_cuniculus
ENSPLAG00000014847	tsen54	100	66.934	ENSORLG00000000852	tsen54	100	66.934	Oryzias_latipes
ENSPLAG00000014847	tsen54	100	67.335	ENSORLG00020018221	tsen54	100	67.335	Oryzias_latipes_hni
ENSPLAG00000014847	tsen54	98	67.894	ENSORLG00015009413	tsen54	99	67.894	Oryzias_latipes_hsok
ENSPLAG00000014847	tsen54	100	68.537	ENSOMEG00000014402	tsen54	97	68.537	Oryzias_melastigma
ENSPLAG00000014847	tsen54	96	47.244	ENSOGAG00000001442	TSEN54	97	46.850	Otolemur_garnettii
ENSPLAG00000014847	tsen54	85	44.956	ENSOARG00000010361	TSEN54	99	45.514	Ovis_aries
ENSPLAG00000014847	tsen54	94	47.505	ENSPPAG00000043519	TSEN54	99	48.419	Pan_paniscus
ENSPLAG00000014847	tsen54	96	47.471	ENSPPRG00000009162	TSEN54	97	48.549	Panthera_pardus
ENSPLAG00000014847	tsen54	85	46.120	ENSPTIG00000019312	TSEN54	96	45.898	Panthera_tigris_altaica
ENSPLAG00000014847	tsen54	99	47.170	ENSPTRG00000009646	TSEN54	99	47.081	Pan_troglodytes
ENSPLAG00000014847	tsen54	99	47.628	ENSPANG00000020133	TSEN54	99	47.280	Papio_anubis
ENSPLAG00000014847	tsen54	98	54.935	ENSPKIG00000023018	tsen54	99	55.024	Paramormyrops_kingsleyae
ENSPLAG00000014847	tsen54	80	44.622	ENSPSIG00000012807	TSEN54	100	44.394	Pelodiscus_sinensis
ENSPLAG00000014847	tsen54	93	49.788	ENSPMGG00000019578	tsen54	100	49.576	Periophthalmus_magnuspinnatus
ENSPLAG00000014847	tsen54	99	45.794	ENSPEMG00000014857	Tsen54	99	45.607	Peromyscus_maniculatus_bairdii
ENSPLAG00000014847	tsen54	100	97.600	ENSPFOG00000022740	tsen54	100	97.600	Poecilia_formosa
ENSPLAG00000014847	tsen54	100	99.395	ENSPMEG00000022876	tsen54	100	99.395	Poecilia_mexicana
ENSPLAG00000014847	tsen54	100	95.363	ENSPREG00000013090	tsen54	100	95.363	Poecilia_reticulata
ENSPLAG00000014847	tsen54	91	48.590	ENSPPYG00000008629	TSEN54	99	48.283	Pongo_abelii
ENSPLAG00000014847	tsen54	92	42.029	ENSPCAG00000002093	TSEN54	96	42.029	Procavia_capensis
ENSPLAG00000014847	tsen54	99	46.272	ENSPCOG00000027880	TSEN54	99	46.935	Propithecus_coquereli
ENSPLAG00000014847	tsen54	99	47.070	ENSPVAG00000008446	TSEN54	99	47.448	Pteropus_vampyrus
ENSPLAG00000014847	tsen54	93	68.421	ENSPNYG00000010217	tsen54	100	68.421	Pundamilia_nyererei
ENSPLAG00000014847	tsen54	97	57.198	ENSPNAG00000003770	tsen54	97	57.198	Pygocentrus_nattereri
ENSPLAG00000014847	tsen54	99	46.542	ENSRNOG00000004598	Tsen54	99	45.981	Rattus_norvegicus
ENSPLAG00000014847	tsen54	99	47.477	ENSRBIG00000043040	TSEN54	99	47.290	Rhinopithecus_bieti
ENSPLAG00000014847	tsen54	99	47.477	ENSRROG00000030797	TSEN54	99	47.290	Rhinopithecus_roxellana
ENSPLAG00000014847	tsen54	99	44.592	ENSSBOG00000013543	TSEN54	98	45.541	Saimiri_boliviensis_boliviensis
ENSPLAG00000014847	tsen54	96	46.300	ENSSHAG00000018127	TSEN54	96	46.300	Sarcophilus_harrisii
ENSPLAG00000014847	tsen54	80	53.810	ENSSFOG00015004093	tsen54	99	53.571	Scleropages_formosus
ENSPLAG00000014847	tsen54	97	66.864	ENSSMAG00000012449	tsen54	98	67.653	Scophthalmus_maximus
ENSPLAG00000014847	tsen54	100	71.731	ENSSDUG00000021506	tsen54	100	71.731	Seriola_dumerili
ENSPLAG00000014847	tsen54	100	71.538	ENSSLDG00000016303	tsen54	100	71.538	Seriola_lalandi_dorsalis
ENSPLAG00000014847	tsen54	79	43.294	ENSSPUG00000008988	TSEN54	96	43.160	Sphenodon_punctatus
ENSPLAG00000014847	tsen54	80	66.502	ENSSPAG00000008047	tsen54	100	66.502	Stegastes_partitus
ENSPLAG00000014847	tsen54	93	72.553	ENSSPAG00000008098	-	99	72.553	Stegastes_partitus
ENSPLAG00000014847	tsen54	96	47.195	ENSSSCG00000036852	TSEN54	97	48.148	Sus_scrofa
ENSPLAG00000014847	tsen54	85	48.230	ENSTGUG00000008548	TSEN54	99	47.566	Taeniopygia_guttata
ENSPLAG00000014847	tsen54	100	68.127	ENSTRUG00000004230	tsen54	100	67.729	Takifugu_rubripes
ENSPLAG00000014847	tsen54	96	64.315	ENSTNIG00000011281	tsen54	98	66.126	Tetraodon_nigroviridis
ENSPLAG00000014847	tsen54	85	45.175	ENSTTRG00000015828	TSEN54	99	45.295	Tursiops_truncatus
ENSPLAG00000014847	tsen54	80	45.035	ENSUAMG00000010045	TSEN54	99	44.573	Ursus_americanus
ENSPLAG00000014847	tsen54	82	45.291	ENSUMAG00000008979	TSEN54	99	45.023	Ursus_maritimus
ENSPLAG00000014847	tsen54	95	48.242	ENSVVUG00000011411	TSEN54	97	47.835	Vulpes_vulpes
ENSPLAG00000014847	tsen54	97	46.600	ENSXETG00000012532	tsen54	100	62.500	Xenopus_tropicalis
ENSPLAG00000014847	tsen54	97	84.200	ENSXCOG00000018245	tsen54	100	88.366	Xiphophorus_couchianus
ENSPLAG00000014847	tsen54	100	94.758	ENSXMAG00000018818	tsen54	100	94.758	Xiphophorus_maculatus