EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000015015 (Gene tree)
Gene ID: 106954784
Gene Symbol: sbno1
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 25150 bases
Position: chrKQ545996.1:29361-54510
Accession: 106954784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000026869	ResIII	PF04851.15	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000019325	-	7036	XM_015044534	ENSPLAP00000026869	1404 (aa)	XP_014900020	UPI00072D9C7D

Gene Model

Click here to download ENSPLAG00000015015's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000015015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000015015	sbno1	70	65.596	ENSPLAG00000014653	si:ch73-63e15.2	65	64.853

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000015015	sbno1	99	76.174	ENSG00000139697	SBNO1	99	75.986	Homo_sapiens
ENSPLAG00000015015	sbno1	82	94.348	ENSAPOG00000003196	sbno1	98	94.348	Acanthochromis_polyacanthus
ENSPLAG00000015015	sbno1	99	76.154	ENSAMEG00000015151	SBNO1	99	75.826	Ailuropoda_melanoleuca
ENSPLAG00000015015	sbno1	100	87.085	ENSACIG00000008088	sbno1	99	87.297	Amphilophus_citrinellus
ENSPLAG00000015015	sbno1	100	91.465	ENSAOCG00000014859	sbno1	99	91.465	Amphiprion_ocellaris
ENSPLAG00000015015	sbno1	100	91.394	ENSAPEG00000006069	sbno1	99	91.394	Amphiprion_percula
ENSPLAG00000015015	sbno1	100	92.253	ENSATEG00000006667	sbno1	100	92.253	Anabas_testudineus
ENSPLAG00000015015	sbno1	98	76.669	ENSAPLG00000015674	SBNO1	99	76.483	Anas_platyrhynchos
ENSPLAG00000015015	sbno1	98	75.410	ENSACAG00000015441	SBNO1	88	75.018	Anolis_carolinensis
ENSPLAG00000015015	sbno1	95	84.029	ENSANAG00000029958	-	99	83.513	Aotus_nancymaae
ENSPLAG00000015015	sbno1	100	85.328	ENSACLG00000024913	sbno1	100	85.470	Astatotilapia_calliptera
ENSPLAG00000015015	sbno1	100	82.128	ENSAMXG00000019473	sbno1	100	82.553	Astyanax_mexicanus
ENSPLAG00000015015	sbno1	100	76.401	ENSBTAG00000020505	SBNO1	99	76.214	Bos_taurus
ENSPLAG00000015015	sbno1	99	76.479	ENSCJAG00000016599	SBNO1	99	76.056	Callithrix_jacchus
ENSPLAG00000015015	sbno1	99	76.207	ENSCAFG00000007503	SBNO1	99	76.992	Canis_familiaris
ENSPLAG00000015015	sbno1	95	81.149	ENSCAFG00020015363	SBNO1	99	81.329	Canis_lupus_dingo
ENSPLAG00000015015	sbno1	95	83.513	ENSCHIG00000008382	SBNO1	99	83.513	Capra_hircus
ENSPLAG00000015015	sbno1	99	76.227	ENSTSYG00000012749	SBNO1	99	77.477	Carlito_syrichta
ENSPLAG00000015015	sbno1	91	83.662	ENSCAPG00000000384	SBNO1	99	83.662	Cavia_aperea
ENSPLAG00000015015	sbno1	95	83.662	ENSCPOG00000008109	SBNO1	99	83.662	Cavia_porcellus
ENSPLAG00000015015	sbno1	99	72.183	ENSCCAG00000035316	SBNO1	99	72.401	Cebus_capucinus
ENSPLAG00000015015	sbno1	99	76.177	ENSCATG00000008239	SBNO1	99	83.842	Cercocebus_atys
ENSPLAG00000015015	sbno1	95	83.662	ENSCLAG00000008995	SBNO1	99	83.662	Chinchilla_lanigera
ENSPLAG00000015015	sbno1	82	82.378	ENSCSAG00000002064	SBNO1	99	82.444	Chlorocebus_sabaeus
ENSPLAG00000015015	sbno1	96	73.483	ENSCHOG00000008814	SBNO1	96	73.214	Choloepus_hoffmanni
ENSPLAG00000015015	sbno1	98	76.170	ENSCPBG00000025968	SBNO1	99	75.637	Chrysemys_picta_bellii
ENSPLAG00000015015	sbno1	99	72.440	ENSCANG00000042688	-	99	72.163	Colobus_angolensis_palliatus
ENSPLAG00000015015	sbno1	95	82.437	ENSCGRG00001017470	Sbno1	99	82.437	Cricetulus_griseus_chok1gshd
ENSPLAG00000015015	sbno1	95	82.437	ENSCGRG00000004756	Sbno1	99	82.437	Cricetulus_griseus_crigri
ENSPLAG00000015015	sbno1	100	88.265	ENSCSEG00000011919	sbno1	100	88.122	Cynoglossus_semilaevis
ENSPLAG00000015015	sbno1	100	95.587	ENSCVAG00000007038	sbno1	100	95.374	Cyprinodon_variegatus
ENSPLAG00000015015	sbno1	99	82.550	ENSDARG00000099080	sbno1	99	82.633	Danio_rerio
ENSPLAG00000015015	sbno1	99	78.707	ENSDNOG00000017147	SBNO1	96	78.707	Dasypus_novemcinctus
ENSPLAG00000015015	sbno1	99	71.388	ENSDORG00000015261	Sbno1	99	81.188	Dipodomys_ordii
ENSPLAG00000015015	sbno1	93	72.642	ENSETEG00000005620	SBNO1	93	72.642	Echinops_telfairi
ENSPLAG00000015015	sbno1	75	62.789	ENSEBUG00000013823	sbno1	93	61.489	Eptatretus_burgeri
ENSPLAG00000015015	sbno1	51	73.481	ENSEASG00005012595	-	92	73.343	Equus_asinus_asinus
ENSPLAG00000015015	sbno1	99	76.384	ENSECAG00000006127	SBNO1	99	76.890	Equus_caballus
ENSPLAG00000015015	sbno1	81	77.596	ENSEEUG00000003793	SBNO1	82	77.596	Erinaceus_europaeus
ENSPLAG00000015015	sbno1	100	83.274	ENSELUG00000002886	sbno1	99	83.062	Esox_lucius
ENSPLAG00000015015	sbno1	99	76.314	ENSFCAG00000015331	SBNO1	99	75.986	Felis_catus
ENSPLAG00000015015	sbno1	98	76.884	ENSFALG00000009273	SBNO1	99	76.554	Ficedula_albicollis
ENSPLAG00000015015	sbno1	95	81.159	ENSFDAG00000014232	SBNO1	99	80.610	Fukomys_damarensis
ENSPLAG00000015015	sbno1	100	95.516	ENSFHEG00000007360	sbno1	100	95.302	Fundulus_heteroclitus
ENSPLAG00000015015	sbno1	94	85.511	ENSGMOG00000018229	sbno1	99	85.521	Gadus_morhua
ENSPLAG00000015015	sbno1	88	76.911	ENSGALG00000003392	SBNO1	99	76.696	Gallus_gallus
ENSPLAG00000015015	sbno1	100	98.718	ENSGAFG00000003960	sbno1	100	98.718	Gambusia_affinis
ENSPLAG00000015015	sbno1	94	89.632	ENSGACG00000015633	sbno1	99	89.482	Gasterosteus_aculeatus
ENSPLAG00000015015	sbno1	98	75.557	ENSGAGG00000001065	SBNO1	99	83.039	Gopherus_agassizii
ENSPLAG00000015015	sbno1	95	83.662	ENSGGOG00000015000	SBNO1	99	83.662	Gorilla_gorilla
ENSPLAG00000015015	sbno1	100	79.247	ENSHBUG00000011910	sbno1	100	79.318	Haplochromis_burtoni
ENSPLAG00000015015	sbno1	95	84.392	ENSHGLG00000014165	-	99	83.993	Heterocephalus_glaber_female
ENSPLAG00000015015	sbno1	92	92.277	ENSHCOG00000003246	sbno1	95	92.277	Hippocampus_comes
ENSPLAG00000015015	sbno1	100	82.236	ENSIPUG00000015830	Sbno1	98	82.955	Ictalurus_punctatus
ENSPLAG00000015015	sbno1	95	83.662	ENSSTOG00000023221	SBNO1	99	83.662	Ictidomys_tridecemlineatus
ENSPLAG00000015015	sbno1	99	76.174	ENSJJAG00000001741	Sbno1	99	79.892	Jaculus_jaculus
ENSPLAG00000015015	sbno1	99	93.647	ENSKMAG00000009696	sbno1	99	93.647	Kryptolebias_marmoratus
ENSPLAG00000015015	sbno1	100	89.433	ENSLBEG00000007623	sbno1	100	89.574	Labrus_bergylta
ENSPLAG00000015015	sbno1	100	72.574	ENSLACG00000017227	SBNO1	99	74.622	Latimeria_chalumnae
ENSPLAG00000015015	sbno1	100	81.901	ENSLOCG00000005725	sbno1	97	81.479	Lepisosteus_oculatus
ENSPLAG00000015015	sbno1	99	75.823	ENSLAFG00000002135	SBNO1	99	75.634	Loxodonta_africana
ENSPLAG00000015015	sbno1	95	80.462	ENSMFAG00000031429	SBNO1	99	80.462	Macaca_fascicularis
ENSPLAG00000015015	sbno1	95	80.462	ENSMMUG00000011496	SBNO1	99	80.462	Macaca_mulatta
ENSPLAG00000015015	sbno1	95	83.662	ENSMLEG00000033260	SBNO1	99	83.662	Mandrillus_leucophaeus
ENSPLAG00000015015	sbno1	100	91.738	ENSMAMG00000005473	sbno1	100	91.524	Mastacembelus_armatus
ENSPLAG00000015015	sbno1	98	77.067	ENSMGAG00000003274	SBNO1	99	76.662	Meleagris_gallopavo
ENSPLAG00000015015	sbno1	50	74.290	ENSMAUG00000004834	-	98	74.395	Mesocricetus_auratus
ENSPLAG00000015015	sbno1	95	81.125	ENSMICG00000006573	-	99	80.645	Microcebus_murinus
ENSPLAG00000015015	sbno1	95	83.154	ENSMOCG00000009390	Sbno1	99	83.154	Microtus_ochrogaster
ENSPLAG00000015015	sbno1	100	83.642	ENSMMOG00000008691	sbno1	99	84.435	Mola_mola
ENSPLAG00000015015	sbno1	99	76.107	ENSMODG00000012470	SBNO1	98	75.918	Monodelphis_domestica
ENSPLAG00000015015	sbno1	100	90.405	ENSMALG00000001056	sbno1	100	90.405	Monopterus_albus
ENSPLAG00000015015	sbno1	99	75.806	MGP_CAROLIEiJ_G0027749	Sbno1	95	91.667	Mus_caroli
ENSPLAG00000015015	sbno1	99	75.666	ENSMUSG00000038095	Sbno1	94	91.667	Mus_musculus
ENSPLAG00000015015	sbno1	99	76.516	MGP_PahariEiJ_G0024329	Sbno1	95	91.667	Mus_pahari
ENSPLAG00000015015	sbno1	99	75.596	MGP_SPRETEiJ_G0028747	Sbno1	95	91.667	Mus_spretus
ENSPLAG00000015015	sbno1	99	76.367	ENSMPUG00000001658	SBNO1	99	76.039	Mustela_putorius_furo
ENSPLAG00000015015	sbno1	99	76.197	ENSMLUG00000017159	SBNO1	99	75.704	Myotis_lucifugus
ENSPLAG00000015015	sbno1	92	84.570	ENSNGAG00000012620	Sbno1	98	84.570	Nannospalax_galili
ENSPLAG00000015015	sbno1	100	86.325	ENSNBRG00000019189	sbno1	100	86.396	Neolamprologus_brichardi
ENSPLAG00000015015	sbno1	99	73.315	ENSNLEG00000001502	SBNO1	99	75.763	Nomascus_leucogenys
ENSPLAG00000015015	sbno1	62	72.956	ENSMEUG00000008768	-	93	73.585	Notamacropus_eugenii
ENSPLAG00000015015	sbno1	99	75.457	ENSOPRG00000011054	SBNO1	99	75.563	Ochotona_princeps
ENSPLAG00000015015	sbno1	95	83.842	ENSODEG00000009997	SBNO1	99	83.842	Octodon_degus
ENSPLAG00000015015	sbno1	100	90.689	ENSONIG00000015348	sbno1	100	90.760	Oreochromis_niloticus
ENSPLAG00000015015	sbno1	98	75.481	ENSOCUG00000002441	SBNO1	95	75.143	Oryctolagus_cuniculus
ENSPLAG00000015015	sbno1	100	89.694	ENSORLG00000001593	sbno1	100	89.694	Oryzias_latipes
ENSPLAG00000015015	sbno1	100	90.114	ENSORLG00020015216	sbno1	100	90.185	Oryzias_latipes_hni
ENSPLAG00000015015	sbno1	100	89.972	ENSORLG00015002726	sbno1	100	90.043	Oryzias_latipes_hsok
ENSPLAG00000015015	sbno1	100	89.395	ENSOMEG00000019313	sbno1	100	89.466	Oryzias_melastigma
ENSPLAG00000015015	sbno1	50	72.753	ENSOGAG00000010781	-	98	72.611	Otolemur_garnettii
ENSPLAG00000015015	sbno1	100	76.104	ENSOARG00000004404	SBNO1	99	75.915	Ovis_aries
ENSPLAG00000015015	sbno1	95	83.662	ENSPPAG00000024635	SBNO1	99	83.662	Pan_paniscus
ENSPLAG00000015015	sbno1	99	76.314	ENSPPRG00000022092	SBNO1	99	75.986	Panthera_pardus
ENSPLAG00000015015	sbno1	99	76.334	ENSPTIG00000017803	SBNO1	99	76.006	Panthera_tigris_altaica
ENSPLAG00000015015	sbno1	95	83.662	ENSPTRG00000005597	SBNO1	99	83.662	Pan_troglodytes
ENSPLAG00000015015	sbno1	95	83.662	ENSPANG00000011640	SBNO1	99	83.662	Papio_anubis
ENSPLAG00000015015	sbno1	100	81.427	ENSPKIG00000001441	sbno1	100	81.003	Paramormyrops_kingsleyae
ENSPLAG00000015015	sbno1	92	73.191	ENSPSIG00000009256	-	99	73.033	Pelodiscus_sinensis
ENSPLAG00000015015	sbno1	98	76.074	ENSPSIG00000009572	-	99	75.670	Pelodiscus_sinensis
ENSPLAG00000015015	sbno1	95	82.975	ENSPEMG00000016087	Sbno1	99	82.975	Peromyscus_maniculatus_bairdii
ENSPLAG00000015015	sbno1	99	76.359	ENSPCIG00000010985	SBNO1	99	76.006	Phascolarctos_cinereus
ENSPLAG00000015015	sbno1	100	99.715	ENSPFOG00000005069	sbno1	100	99.715	Poecilia_formosa
ENSPLAG00000015015	sbno1	100	99.573	ENSPMEG00000021212	sbno1	100	99.573	Poecilia_mexicana
ENSPLAG00000015015	sbno1	100	98.648	ENSPREG00000017746	sbno1	100	98.648	Poecilia_reticulata
ENSPLAG00000015015	sbno1	99	76.037	ENSPPYG00000005084	SBNO1	99	75.918	Pongo_abelii
ENSPLAG00000015015	sbno1	89	69.640	ENSPCAG00000008634	SBNO1	88	68.892	Procavia_capensis
ENSPLAG00000015015	sbno1	95	83.971	ENSPCOG00000024277	SBNO1	99	83.971	Propithecus_coquereli
ENSPLAG00000015015	sbno1	87	84.095	ENSPVAG00000015304	SBNO1	87	84.095	Pteropus_vampyrus
ENSPLAG00000015015	sbno1	100	90.547	ENSPNYG00000004291	sbno1	100	90.618	Pundamilia_nyererei
ENSPLAG00000015015	sbno1	100	82.353	ENSPNAG00000015622	sbno1	100	81.999	Pygocentrus_nattereri
ENSPLAG00000015015	sbno1	95	83.154	ENSRNOG00000001064	Sbno1	99	83.303	Rattus_norvegicus
ENSPLAG00000015015	sbno1	95	83.662	ENSRROG00000034230	SBNO1	99	83.662	Rhinopithecus_roxellana
ENSPLAG00000015015	sbno1	97	74.361	ENSSBOG00000015422	SBNO1	99	73.923	Saimiri_boliviensis_boliviensis
ENSPLAG00000015015	sbno1	100	81.889	ENSSFOG00015019025	sbno1	100	81.510	Scleropages_formosus
ENSPLAG00000015015	sbno1	100	90.676	ENSSMAG00000013640	sbno1	100	90.676	Scophthalmus_maximus
ENSPLAG00000015015	sbno1	100	92.395	ENSSDUG00000023480	sbno1	100	92.395	Seriola_dumerili
ENSPLAG00000015015	sbno1	100	92.253	ENSSLDG00000007928	sbno1	100	92.253	Seriola_lalandi_dorsalis
ENSPLAG00000015015	sbno1	89	81.290	ENSSARG00000002594	SBNO1	89	81.129	Sorex_araneus
ENSPLAG00000015015	sbno1	98	76.118	ENSSPUG00000012640	SBNO1	99	75.603	Sphenodon_punctatus
ENSPLAG00000015015	sbno1	100	92.182	ENSSPAG00000016244	sbno1	100	92.182	Stegastes_partitus
ENSPLAG00000015015	sbno1	99	76.227	ENSSSCG00000009776	SBNO1	99	75.969	Sus_scrofa
ENSPLAG00000015015	sbno1	98	76.835	ENSTGUG00000005380	SBNO1	99	76.412	Taeniopygia_guttata
ENSPLAG00000015015	sbno1	99	86.629	ENSTRUG00000018490	sbno1	99	86.700	Takifugu_rubripes
ENSPLAG00000015015	sbno1	57	83.666	ENSTNIG00000013506	sbno1	99	83.689	Tetraodon_nigroviridis
ENSPLAG00000015015	sbno1	99	76.314	ENSUAMG00000019671	SBNO1	99	75.986	Ursus_americanus
ENSPLAG00000015015	sbno1	99	76.314	ENSUMAG00000004002	SBNO1	99	75.986	Ursus_maritimus
ENSPLAG00000015015	sbno1	95	73.333	ENSVPAG00000007024	SBNO1	95	73.333	Vicugna_pacos
ENSPLAG00000015015	sbno1	99	76.314	ENSVVUG00000027807	SBNO1	99	75.986	Vulpes_vulpes
ENSPLAG00000015015	sbno1	99	72.886	ENSXETG00000031930	SBNO1	99	72.625	Xenopus_tropicalis
ENSPLAG00000015015	sbno1	89	94.551	ENSXCOG00000011607	sbno1	99	93.333	Xiphophorus_couchianus
ENSPLAG00000015015	sbno1	100	98.505	ENSXMAG00000002140	sbno1	100	98.505	Xiphophorus_maculatus