EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000015056 (Gene tree)
Gene ID: 106961689
Gene Symbol: gar1
Alias: -
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3991 bases
Position: chrKQ546638.1:272750-276740
Accession: 106961689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000011860	Gar1	PF04410.14	1.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000019392	-	1453	XM_015055578	ENSPLAP00000011860	211 (aa)	XP_014911064	UPI00044397C9

Gene Model

Click here to download ENSPLAG00000015056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000015056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000015056	gar1	51	96.296	ENSAPOG00000019754	gar1	51	96.296	Acanthochromis_polyacanthus
ENSPLAG00000015056	gar1	51	91.589	ENSAMEG00000004605	GAR1	52	91.589	Ailuropoda_melanoleuca
ENSPLAG00000015056	gar1	51	96.296	ENSAOCG00000020947	gar1	50	96.296	Amphiprion_ocellaris
ENSPLAG00000015056	gar1	51	96.296	ENSAPEG00000001676	gar1	50	96.296	Amphiprion_percula
ENSPLAG00000015056	gar1	51	97.222	ENSATEG00000003733	gar1	50	97.222	Anabas_testudineus
ENSPLAG00000015056	gar1	50	90.566	ENSAPLG00000010926	GAR1	59	90.566	Anas_platyrhynchos
ENSPLAG00000015056	gar1	67	79.577	ENSACAG00000010031	GAR1	50	91.509	Anolis_carolinensis
ENSPLAG00000015056	gar1	52	95.455	ENSACLG00000010029	gar1	64	80.420	Astatotilapia_calliptera
ENSPLAG00000015056	gar1	51	92.523	ENSBTAG00000000748	GAR1	51	92.523	Bos_taurus
ENSPLAG00000015056	gar1	51	92.523	ENSCHIG00000016026	-	51	92.523	Capra_hircus
ENSPLAG00000015056	gar1	51	85.047	ENSTSYG00000026632	-	55	85.047	Carlito_syrichta
ENSPLAG00000015056	gar1	51	93.458	ENSTSYG00000013668	-	50	93.458	Carlito_syrichta
ENSPLAG00000015056	gar1	52	91.818	ENSCATG00000021854	GAR1	54	93.458	Cercocebus_atys
ENSPLAG00000015056	gar1	52	90.000	ENSCLAG00000005335	GAR1	69	94.545	Chinchilla_lanigera
ENSPLAG00000015056	gar1	51	91.589	ENSCSAG00000003922	GAR1	54	93.458	Chlorocebus_sabaeus
ENSPLAG00000015056	gar1	50	91.509	ENSCPBG00000004310	GAR1	54	91.509	Chrysemys_picta_bellii
ENSPLAG00000015056	gar1	51	96.296	ENSCVAG00000002103	gar1	52	96.296	Cyprinodon_variegatus
ENSPLAG00000015056	gar1	51	93.458	ENSDNOG00000037632	GAR1	54	93.458	Dasypus_novemcinctus
ENSPLAG00000015056	gar1	52	91.818	ENSEASG00005004658	GAR1	50	93.458	Equus_asinus_asinus
ENSPLAG00000015056	gar1	52	90.909	ENSECAG00000013624	GAR1	54	92.523	Equus_caballus
ENSPLAG00000015056	gar1	51	92.523	ENSFCAG00000040791	-	51	92.523	Felis_catus
ENSPLAG00000015056	gar1	51	56.075	ENSFCAG00000025841	-	50	58.879	Felis_catus
ENSPLAG00000015056	gar1	53	97.297	ENSFHEG00000008068	gar1	50	97.222	Fundulus_heteroclitus
ENSPLAG00000015056	gar1	51	90.741	ENSGMOG00000012419	gar1	58	80.916	Gadus_morhua
ENSPLAG00000015056	gar1	51	99.074	ENSGAFG00000016833	gar1	90	96.244	Gambusia_affinis
ENSPLAG00000015056	gar1	75	93.038	ENSHBUG00000023860	gar1	79	93.038	Haplochromis_burtoni
ENSPLAG00000015056	gar1	51	93.458	ENSHGLG00000000493	GAR1	72	96.364	Heterocephalus_glaber_female
ENSPLAG00000015056	gar1	52	93.636	ENSIPUG00000003194	gar1	51	93.519	Ictalurus_punctatus
ENSPLAG00000015056	gar1	52	90.826	ENSSTOG00000005577	GAR1	71	94.545	Ictidomys_tridecemlineatus
ENSPLAG00000015056	gar1	53	94.595	ENSKMAG00000010402	gar1	51	95.370	Kryptolebias_marmoratus
ENSPLAG00000015056	gar1	57	86.777	ENSLACG00000003306	GAR1	64	87.736	Latimeria_chalumnae
ENSPLAG00000015056	gar1	51	80.556	ENSMFAG00000003572	-	52	80.374	Macaca_fascicularis
ENSPLAG00000015056	gar1	52	95.455	ENSMZEG00005001281	gar1	64	80.420	Maylandia_zebra
ENSPLAG00000015056	gar1	70	85.714	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSPLAG00000015056	gar1	70	84.354	ENSMOCG00000001340	Gar1	70	96.364	Microtus_ochrogaster
ENSPLAG00000015056	gar1	59	90.400	ENSMMOG00000004156	gar1	53	93.519	Mola_mola
ENSPLAG00000015056	gar1	51	96.262	ENSMALG00000009672	gar1	50	95.370	Monopterus_albus
ENSPLAG00000015056	gar1	81	85.034	MGP_CAROLIEiJ_G0025627	Gar1	70	96.364	Mus_caroli
ENSPLAG00000015056	gar1	81	84.000	ENSMUSG00000028010	Gar1	70	96.364	Mus_musculus
ENSPLAG00000015056	gar1	71	84.000	MGP_PahariEiJ_G0027076	Gar1	70	96.364	Mus_pahari
ENSPLAG00000015056	gar1	81	84.000	MGP_SPRETEiJ_G0026580	Gar1	70	96.364	Mus_spretus
ENSPLAG00000015056	gar1	51	92.523	ENSMPUG00000008615	GAR1	51	92.523	Mustela_putorius_furo
ENSPLAG00000015056	gar1	71	83.333	ENSNGAG00000008268	Gar1	71	94.545	Nannospalax_galili
ENSPLAG00000015056	gar1	52	91.818	ENSNLEG00000016578	GAR1	50	93.458	Nomascus_leucogenys
ENSPLAG00000015056	gar1	50	80.000	ENSNLEG00000034282	-	54	78.505	Nomascus_leucogenys
ENSPLAG00000015056	gar1	51	91.589	ENSODEG00000011083	GAR1	78	80.132	Octodon_degus
ENSPLAG00000015056	gar1	51	93.458	ENSOCUG00000003901	GAR1	50	93.458	Oryctolagus_cuniculus
ENSPLAG00000015056	gar1	51	93.458	ENSOGAG00000004693	GAR1	50	93.458	Otolemur_garnettii
ENSPLAG00000015056	gar1	51	92.523	ENSOARG00000004910	GAR1	51	92.523	Ovis_aries
ENSPLAG00000015056	gar1	69	83.562	ENSPPAG00000014081	GAR1	64	87.857	Pan_paniscus
ENSPLAG00000015056	gar1	51	92.523	ENSPPRG00000023697	GAR1	51	92.523	Panthera_pardus
ENSPLAG00000015056	gar1	51	92.523	ENSPTIG00000021565	GAR1	51	92.523	Panthera_tigris_altaica
ENSPLAG00000015056	gar1	52	91.818	ENSPTRG00000016364	GAR1	54	93.458	Pan_troglodytes
ENSPLAG00000015056	gar1	51	95.327	ENSPEMG00000015838	Gar1	70	96.364	Peromyscus_maniculatus_bairdii
ENSPLAG00000015056	gar1	100	100.000	ENSPFOG00000024155	gar1	100	100.000	Poecilia_formosa
ENSPLAG00000015056	gar1	100	98.578	ENSPMEG00000009320	gar1	100	98.578	Poecilia_mexicana
ENSPLAG00000015056	gar1	59	84.800	ENSPCOG00000027049	GAR1	60	92.308	Propithecus_coquereli
ENSPLAG00000015056	gar1	51	95.370	ENSRNOG00000061146	Gar1	63	95.327	Rattus_norvegicus
ENSPLAG00000015056	gar1	53	76.786	ENSRBIG00000042411	-	52	77.570	Rhinopithecus_bieti
ENSPLAG00000015056	gar1	51	93.458	ENSRBIG00000019547	GAR1	54	93.458	Rhinopithecus_bieti
ENSPLAG00000015056	gar1	52	91.818	ENSRROG00000028454	GAR1	54	93.458	Rhinopithecus_roxellana
ENSPLAG00000015056	gar1	53	76.786	ENSRROG00000044348	-	51	77.570	Rhinopithecus_roxellana
ENSPLAG00000015056	gar1	51	93.458	ENSSBOG00000024785	GAR1	50	93.458	Saimiri_boliviensis_boliviensis
ENSPLAG00000015056	gar1	51	92.593	ENSSMAG00000009976	gar1	50	92.593	Scophthalmus_maximus
ENSPLAG00000015056	gar1	51	95.370	ENSSLDG00000023264	gar1	51	95.370	Seriola_lalandi_dorsalis
ENSPLAG00000015056	gar1	50	92.453	ENSSPUG00000008707	GAR1	68	89.344	Sphenodon_punctatus
ENSPLAG00000015056	gar1	51	92.523	ENSSSCG00000009137	GAR1	53	92.523	Sus_scrofa
ENSPLAG00000015056	gar1	51	94.444	ENSTRUG00000020580	gar1	52	94.444	Takifugu_rubripes
ENSPLAG00000015056	gar1	50	97.143	ENSTNIG00000013023	gar1	61	97.222	Tetraodon_nigroviridis
ENSPLAG00000015056	gar1	51	92.523	ENSUMAG00000000776	GAR1	52	92.523	Ursus_maritimus
ENSPLAG00000015056	gar1	51	92.523	ENSVVUG00000017612	GAR1	55	92.523	Vulpes_vulpes