EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000015187 (Gene tree)
Gene ID: 106963698
Gene Symbol: mrps18c
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 5491 bases
Position: chrKQ546882.1:120261-125751
Accession: 106963698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000011973	Ribosomal_S18	PF01084.20	9.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000019527	-	1432	XM_015058746	ENSPLAP00000011973	128 (aa)	XP_014914232	UPI000443C714

Gene Model

Click here to download ENSPLAG00000015187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000015187's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000015187	mrps18c	100	65.116	ENSAPOG00000019045	mrps18c	100	65.116	Acanthochromis_polyacanthus
ENSPLAG00000015187	mrps18c	72	75.000	ENSACIG00000020253	mrps18c	91	75.000	Amphilophus_citrinellus
ENSPLAG00000015187	mrps18c	100	60.465	ENSAOCG00000014338	mrps18c	100	60.465	Amphiprion_ocellaris
ENSPLAG00000015187	mrps18c	100	60.465	ENSAPEG00000022956	mrps18c	100	60.465	Amphiprion_percula
ENSPLAG00000015187	mrps18c	68	75.862	ENSAPEG00000023068	-	87	72.826	Amphiprion_percula
ENSPLAG00000015187	mrps18c	100	71.538	ENSATEG00000023417	mrps18c	100	71.538	Anabas_testudineus
ENSPLAG00000015187	mrps18c	70	65.169	ENSAPLG00000012544	-	86	65.169	Anas_platyrhynchos
ENSPLAG00000015187	mrps18c	73	78.495	ENSACLG00000010521	mrps18c	91	78.495	Astatotilapia_calliptera
ENSPLAG00000015187	mrps18c	71	71.429	ENSAMXG00000012238	mrps18c	92	71.429	Astyanax_mexicanus
ENSPLAG00000015187	mrps18c	94	56.452	ENSCPBG00000007783	-	76	56.452	Chrysemys_picta_bellii
ENSPLAG00000015187	mrps18c	74	71.579	ENSCSEG00000000711	mrps18c	67	71.579	Cynoglossus_semilaevis
ENSPLAG00000015187	mrps18c	100	75.000	ENSCVAG00000020169	mrps18c	100	75.000	Cyprinodon_variegatus
ENSPLAG00000015187	mrps18c	94	60.484	ENSDARG00000069624	mrps18c	91	60.484	Danio_rerio
ENSPLAG00000015187	mrps18c	83	68.519	ENSELUG00000024603	mrps18c	81	68.519	Esox_lucius
ENSPLAG00000015187	mrps18c	100	78.906	ENSFHEG00000018752	-	100	78.906	Fundulus_heteroclitus
ENSPLAG00000015187	mrps18c	100	78.906	ENSFHEG00000015550	mrps18c	95	78.906	Fundulus_heteroclitus
ENSPLAG00000015187	mrps18c	80	60.784	ENSGALG00000023191	MRPS18C	71	60.784	Gallus_gallus
ENSPLAG00000015187	mrps18c	100	92.969	ENSGAFG00000008048	mrps18c	83	92.969	Gambusia_affinis
ENSPLAG00000015187	mrps18c	77	65.306	ENSGAGG00000015144	-	69	65.306	Gopherus_agassizii
ENSPLAG00000015187	mrps18c	100	66.923	ENSHBUG00000002008	mrps18c	100	66.923	Haplochromis_burtoni
ENSPLAG00000015187	mrps18c	82	69.444	ENSHCOG00000013161	mrps18c	82	69.444	Hippocampus_comes
ENSPLAG00000015187	mrps18c	71	63.736	ENSIPUG00000003783	mrps18c	88	63.736	Ictalurus_punctatus
ENSPLAG00000015187	mrps18c	100	75.000	ENSKMAG00000016467	mrps18c	100	75.000	Kryptolebias_marmoratus
ENSPLAG00000015187	mrps18c	100	65.385	ENSLBEG00000021861	mrps18c	100	65.385	Labrus_bergylta
ENSPLAG00000015187	mrps18c	100	65.385	ENSLBEG00000019174	mrps18c	100	65.385	Labrus_bergylta
ENSPLAG00000015187	mrps18c	98	55.469	ENSLACG00000011243	mrps18c	100	55.469	Latimeria_chalumnae
ENSPLAG00000015187	mrps18c	73	70.213	ENSLOCG00000012115	mrps18c	70	70.213	Lepisosteus_oculatus
ENSPLAG00000015187	mrps18c	100	59.701	ENSMAMG00000012386	mrps18c	100	59.701	Mastacembelus_armatus
ENSPLAG00000015187	mrps18c	100	66.923	ENSMZEG00005023278	mrps18c	100	66.923	Maylandia_zebra
ENSPLAG00000015187	mrps18c	73	77.419	ENSMMOG00000011316	mrps18c	71	77.419	Mola_mola
ENSPLAG00000015187	mrps18c	100	66.923	ENSNBRG00000006182	mrps18c	100	66.923	Neolamprologus_brichardi
ENSPLAG00000015187	mrps18c	68	66.667	ENSMEUG00000010972	-	69	66.667	Notamacropus_eugenii
ENSPLAG00000015187	mrps18c	100	66.923	ENSONIG00000012527	mrps18c	91	78.261	Oreochromis_niloticus
ENSPLAG00000015187	mrps18c	100	62.791	ENSORLG00015006869	mrps18c	100	62.791	Oryzias_latipes_hsok
ENSPLAG00000015187	mrps18c	70	70.787	ENSOMEG00000005009	mrps18c	86	70.787	Oryzias_melastigma
ENSPLAG00000015187	mrps18c	80	68.932	ENSPKIG00000021736	mrps18c	75	68.932	Paramormyrops_kingsleyae
ENSPLAG00000015187	mrps18c	71	75.824	ENSPMGG00000002991	mrps18c	92	75.824	Periophthalmus_magnuspinnatus
ENSPLAG00000015187	mrps18c	100	100.000	ENSPFOG00000002351	mrps18c	83	100.000	Poecilia_formosa
ENSPLAG00000015187	mrps18c	100	99.219	ENSPMEG00000014488	mrps18c	83	99.219	Poecilia_mexicana
ENSPLAG00000015187	mrps18c	67	98.837	ENSPREG00000012593	mrps18c	88	98.837	Poecilia_reticulata
ENSPLAG00000015187	mrps18c	100	66.154	ENSPNYG00000010654	mrps18c	100	66.154	Pundamilia_nyererei
ENSPLAG00000015187	mrps18c	82	61.905	ENSPNAG00000009350	mrps18c	93	61.905	Pygocentrus_nattereri
ENSPLAG00000015187	mrps18c	100	62.308	ENSSFOG00015019444	mrps18c	93	62.308	Scleropages_formosus
ENSPLAG00000015187	mrps18c	100	67.188	ENSSDUG00000015676	mrps18c	100	67.188	Seriola_dumerili
ENSPLAG00000015187	mrps18c	83	65.517	ENSSLDG00000002034	mrps18c	90	65.517	Seriola_lalandi_dorsalis
ENSPLAG00000015187	mrps18c	80	56.311	ENSSPUG00000013990	-	72	56.311	Sphenodon_punctatus
ENSPLAG00000015187	mrps18c	99	61.719	ENSSPAG00000008687	mrps18c	99	61.719	Stegastes_partitus
ENSPLAG00000015187	mrps18c	100	60.769	ENSTRUG00000024403	mrps18c	100	60.769	Takifugu_rubripes
ENSPLAG00000015187	mrps18c	100	63.077	ENSTNIG00000005674	mrps18c	100	63.077	Tetraodon_nigroviridis
ENSPLAG00000015187	mrps18c	70	64.045	ENSXETG00000027597	mrps18c	68	64.045	Xenopus_tropicalis
ENSPLAG00000015187	mrps18c	100	84.375	ENSXCOG00000016208	mrps18c	87	96.552	Xiphophorus_couchianus
ENSPLAG00000015187	mrps18c	100	93.750	ENSXMAG00000012555	mrps18c	83	93.750	Xiphophorus_maculatus