EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000015223 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 2244 bases
Position: chrKQ546121.1:128680-130923
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000026989	RRM_1	PF00076.22	2.1e-29	1	2
ENSPLAP00000026989	RRM_1	PF00076.22	2.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000019560	-	927	-	ENSPLAP00000026989	308 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000015223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000015223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000015223	-	58	56.111	ENSPLAG00000013254	hnrnpa1b	79	56.725
ENSPLAG00000015223	-	58	36.207	ENSPLAG00000004297	hnrnpd	53	36.000
ENSPLAG00000015223	-	88	48.905	ENSPLAG00000009033	HNRNPA3	63	53.216
ENSPLAG00000015223	-	57	35.772	ENSPLAG00000000436	msi2a	64	35.772
ENSPLAG00000015223	-	98	31.715	ENSPLAG00000012431	-	52	37.791
ENSPLAG00000015223	-	55	39.645	ENSPLAG00000009450	hnrnpaba	52	39.080
ENSPLAG00000015223	-	73	35.652	ENSPLAG00000014025	-	55	37.209
ENSPLAG00000015223	-	54	41.333	ENSPLAG00000006542	rbm24a	51	41.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000015223	-	58	50.679	ENSG00000177733	HNRNPA0	56	63.158	Homo_sapiens
ENSPLAG00000015223	-	61	51.596	ENSAPOG00000003688	hnrnpa3	58	52.601	Acanthochromis_polyacanthus
ENSPLAG00000015223	-	90	81.227	ENSAPOG00000003364	HNRNPA0	93	83.813	Acanthochromis_polyacanthus
ENSPLAG00000015223	-	76	60.593	ENSAPOG00000003387	HNRNPA0	60	73.684	Acanthochromis_polyacanthus
ENSPLAG00000015223	-	56	52.907	ENSAPOG00000003641	hnrnpa3	70	52.907	Acanthochromis_polyacanthus
ENSPLAG00000015223	-	56	52.907	ENSAPOG00000014678	-	51	52.601	Acanthochromis_polyacanthus
ENSPLAG00000015223	-	56	50.000	ENSAMEG00000004293	-	55	51.111	Ailuropoda_melanoleuca
ENSPLAG00000015223	-	72	50.673	ENSAMEG00000016316	HNRNPA0	56	62.428	Ailuropoda_melanoleuca
ENSPLAG00000015223	-	58	71.348	ENSACIG00000021834	HNRNPA0	76	73.684	Amphilophus_citrinellus
ENSPLAG00000015223	-	61	51.596	ENSAPEG00000022522	hnrnpa3	56	52.601	Amphiprion_percula
ENSPLAG00000015223	-	61	51.596	ENSATEG00000015304	hnrnpa3	56	52.601	Anabas_testudineus
ENSPLAG00000015223	-	56	91.908	ENSATEG00000003526	-	92	91.908	Anabas_testudineus
ENSPLAG00000015223	-	61	54.787	ENSACAG00000012234	-	51	56.647	Anolis_carolinensis
ENSPLAG00000015223	-	61	51.596	ENSACLG00000008532	hnrnpa3	54	52.601	Astatotilapia_calliptera
ENSPLAG00000015223	-	61	52.941	ENSCJAG00000013830	-	51	52.907	Callithrix_jacchus
ENSPLAG00000015223	-	56	62.573	ENSCJAG00000006112	HNRNPA0	57	62.573	Callithrix_jacchus
ENSPLAG00000015223	-	56	63.158	ENSCAFG00000001132	HNRNPA0	58	62.570	Canis_familiaris
ENSPLAG00000015223	-	56	63.158	ENSCAFG00020008142	HNRNPA0	58	62.570	Canis_lupus_dingo
ENSPLAG00000015223	-	57	49.123	ENSCAPG00000003643	-	90	42.593	Cavia_aperea
ENSPLAG00000015223	-	65	57.214	ENSCPOG00000026092	HNRNPA0	57	63.743	Cavia_porcellus
ENSPLAG00000015223	-	63	60.000	ENSCCAG00000010302	HNRNPA0	56	62.573	Cebus_capucinus
ENSPLAG00000015223	-	56	63.158	ENSCATG00000021167	HNRNPA0	56	63.158	Cercocebus_atys
ENSPLAG00000015223	-	56	63.743	ENSCLAG00000015132	HNRNPA0	60	63.743	Chinchilla_lanigera
ENSPLAG00000015223	-	56	63.743	ENSCGRG00001005548	Hnrnpa0	57	63.743	Cricetulus_griseus_chok1gshd
ENSPLAG00000015223	-	59	45.055	ENSCGRG00001010070	-	55	45.087	Cricetulus_griseus_chok1gshd
ENSPLAG00000015223	-	69	37.989	ENSCGRG00001012459	-	68	36.992	Cricetulus_griseus_chok1gshd
ENSPLAG00000015223	-	59	45.055	ENSCGRG00000007592	-	54	45.087	Cricetulus_griseus_crigri
ENSPLAG00000015223	-	86	43.609	ENSCGRG00000003686	-	61	49.711	Cricetulus_griseus_crigri
ENSPLAG00000015223	-	61	52.128	ENSCVAG00000018995	hnrnpa3	50	53.801	Cyprinodon_variegatus
ENSPLAG00000015223	-	57	53.143	ENSDARG00000059351	hnrnpa3	93	44.118	Danio_rerio
ENSPLAG00000015223	-	56	63.158	ENSDNOG00000030903	HNRNPA0	56	62.428	Dasypus_novemcinctus
ENSPLAG00000015223	-	56	41.379	ENSETEG00000007747	-	60	41.618	Echinops_telfairi
ENSPLAG00000015223	-	88	51.087	ENSEBUG00000016570	HNRNPA0	92	43.082	Eptatretus_burgeri
ENSPLAG00000015223	-	56	54.386	ENSEBUG00000009297	HNRNPA0	94	45.455	Eptatretus_burgeri
ENSPLAG00000015223	-	56	63.158	ENSECAG00000032164	HNRNPA0	58	62.428	Equus_caballus
ENSPLAG00000015223	-	88	46.667	ENSELUG00000023080	hnrnpa3	86	41.549	Esox_lucius
ENSPLAG00000015223	-	86	55.970	ENSFCAG00000040261	HNRNPA0	59	62.570	Felis_catus
ENSPLAG00000015223	-	58	61.878	ENSFALG00000014395	HNRNPA0	51	63.743	Ficedula_albicollis
ENSPLAG00000015223	-	59	47.802	ENSFDAG00000000331	-	55	45.641	Fukomys_damarensis
ENSPLAG00000015223	-	56	42.529	ENSFDAG00000018739	-	60	42.775	Fukomys_damarensis
ENSPLAG00000015223	-	90	89.825	ENSFHEG00000008390	HNRNPA0	93	87.762	Fundulus_heteroclitus
ENSPLAG00000015223	-	70	73.377	ENSFHEG00000008384	HNRNPA0	78	73.377	Fundulus_heteroclitus
ENSPLAG00000015223	-	58	51.648	ENSGACG00000004477	hnrnpa3	61	51.445	Gasterosteus_aculeatus
ENSPLAG00000015223	-	70	71.910	ENSHBUG00000023868	HNRNPA0	67	74.269	Haplochromis_burtoni
ENSPLAG00000015223	-	61	51.064	ENSHBUG00000019734	hnrnpa3	54	52.023	Haplochromis_burtoni
ENSPLAG00000015223	-	57	51.724	ENSHGLG00000014577	-	66	52.023	Heterocephalus_glaber_female
ENSPLAG00000015223	-	61	51.596	ENSHGLG00100001336	-	92	42.901	Heterocephalus_glaber_male
ENSPLAG00000015223	-	70	69.753	ENSHCOG00000007174	HNRNPA0	94	69.753	Hippocampus_comes
ENSPLAG00000015223	-	56	54.971	ENSIPUG00000019815	RO32	52	54.971	Ictalurus_punctatus
ENSPLAG00000015223	-	59	62.637	ENSJJAG00000006954	Hnrnpa0	59	63.743	Jaculus_jaculus
ENSPLAG00000015223	-	61	52.660	ENSLBEG00000016767	hnrnpa3	55	53.757	Labrus_bergylta
ENSPLAG00000015223	-	57	54.286	ENSLACG00000008189	hnrnpa3	91	41.617	Latimeria_chalumnae
ENSPLAG00000015223	-	91	51.546	ENSLACG00000014480	HNRNPA0	60	63.158	Latimeria_chalumnae
ENSPLAG00000015223	-	61	52.128	ENSLOCG00000006986	hnrnpa3	94	43.849	Lepisosteus_oculatus
ENSPLAG00000015223	-	57	54.857	ENSLOCG00000006476	-	65	47.768	Lepisosteus_oculatus
ENSPLAG00000015223	-	55	53.378	ENSLAFG00000027712	-	54	54.110	Loxodonta_africana
ENSPLAG00000015223	-	74	43.777	ENSMNEG00000038943	-	74	45.405	Macaca_nemestrina
ENSPLAG00000015223	-	71	61.991	ENSMAMG00000017754	HNRNPA0	67	72.515	Mastacembelus_armatus
ENSPLAG00000015223	-	61	51.596	ENSMZEG00005004663	hnrnpa3	55	52.601	Maylandia_zebra
ENSPLAG00000015223	-	56	63.743	ENSMAUG00000018485	Hnrnpa0	57	63.743	Mesocricetus_auratus
ENSPLAG00000015223	-	56	63.158	ENSMODG00000014720	HNRNPA0	66	63.158	Monodelphis_domestica
ENSPLAG00000015223	-	59	61.988	ENSMODG00000002463	-	94	61.988	Monodelphis_domestica
ENSPLAG00000015223	-	67	49.756	ENSMALG00000009691	hnrnpa3	92	47.826	Monopterus_albus
ENSPLAG00000015223	-	86	57.090	ENSMPUG00000019790	HNRNPA0	58	62.570	Mustela_putorius_furo
ENSPLAG00000015223	-	56	60.819	ENSMLUG00000028644	-	74	47.101	Myotis_lucifugus
ENSPLAG00000015223	-	56	63.743	ENSNGAG00000008883	Hnrnpa0	60	63.006	Nannospalax_galili
ENSPLAG00000015223	-	56	63.158	ENSNLEG00000008518	HNRNPA0	61	60.000	Nomascus_leucogenys
ENSPLAG00000015223	-	57	54.598	ENSNLEG00000027151	-	53	54.913	Nomascus_leucogenys
ENSPLAG00000015223	-	56	63.743	ENSMEUG00000013675	HNRNPA0	56	63.743	Notamacropus_eugenii
ENSPLAG00000015223	-	64	55.051	ENSORLG00000025015	-	57	58.960	Oryzias_latipes
ENSPLAG00000015223	-	70	57.386	ENSORLG00000027074	-	79	58.480	Oryzias_latipes
ENSPLAG00000015223	-	64	55.051	ENSORLG00000025332	-	57	58.960	Oryzias_latipes
ENSPLAG00000015223	-	61	52.660	ENSORLG00000017561	hnrnpa3	56	53.757	Oryzias_latipes
ENSPLAG00000015223	-	61	52.128	ENSORLG00020020788	hnrnpa3	56	53.179	Oryzias_latipes_hni
ENSPLAG00000015223	-	93	46.102	ENSORLG00020022487	-	61	60.819	Oryzias_latipes_hni
ENSPLAG00000015223	-	90	45.277	ENSORLG00020007505	-	57	59.649	Oryzias_latipes_hni
ENSPLAG00000015223	-	92	48.993	ENSORLG00020008203	-	59	58.286	Oryzias_latipes_hni
ENSPLAG00000015223	-	90	44.654	ENSORLG00020007109	-	58	59.064	Oryzias_latipes_hni
ENSPLAG00000015223	-	90	46.226	ENSORLG00015016507	-	53	59.649	Oryzias_latipes_hsok
ENSPLAG00000015223	-	70	57.955	ENSORLG00015015182	-	75	59.064	Oryzias_latipes_hsok
ENSPLAG00000015223	-	91	48.239	ENSORLG00015015185	-	62	58.721	Oryzias_latipes_hsok
ENSPLAG00000015223	-	57	50.000	ENSORLG00015016236	HNRNPA0	57	51.020	Oryzias_latipes_hsok
ENSPLAG00000015223	-	61	52.660	ENSORLG00015014774	hnrnpa3	55	53.757	Oryzias_latipes_hsok
ENSPLAG00000015223	-	90	47.782	ENSORLG00015016157	-	60	58.480	Oryzias_latipes_hsok
ENSPLAG00000015223	-	76	46.792	ENSORLG00015016169	HNRNPA0	58	57.895	Oryzias_latipes_hsok
ENSPLAG00000015223	-	90	50.172	ENSORLG00015017144	-	57	59.064	Oryzias_latipes_hsok
ENSPLAG00000015223	-	89	84.672	ENSORLG00015016302	HNRNPA0	90	84.588	Oryzias_latipes_hsok
ENSPLAG00000015223	-	61	51.596	ENSOMEG00000004838	hnrnpa3	95	46.865	Oryzias_melastigma
ENSPLAG00000015223	-	56	63.158	ENSOGAG00000025754	HNRNPA0	73	62.428	Otolemur_garnettii
ENSPLAG00000015223	-	65	58.209	ENSOARG00000015434	HNRNPA0	59	62.428	Ovis_aries
ENSPLAG00000015223	-	56	63.158	ENSPPAG00000005303	HNRNPA0	61	60.000	Pan_paniscus
ENSPLAG00000015223	-	86	55.224	ENSPPRG00000014655	HNRNPA0	95	53.642	Panthera_pardus
ENSPLAG00000015223	-	56	63.158	ENSPTRG00000017273	HNRNPA0	61	60.000	Pan_troglodytes
ENSPLAG00000015223	-	56	77.193	ENSPKIG00000020281	-	51	77.193	Paramormyrops_kingsleyae
ENSPLAG00000015223	-	56	76.608	ENSPKIG00000020270	HNRNPA0	61	76.608	Paramormyrops_kingsleyae
ENSPLAG00000015223	-	69	50.237	ENSPKIG00000022916	hnrnpa3	70	49.479	Paramormyrops_kingsleyae
ENSPLAG00000015223	-	56	52.601	ENSPMGG00000000747	hnrnpa3	75	51.370	Periophthalmus_magnuspinnatus
ENSPLAG00000015223	-	56	63.743	ENSPEMG00000020274	Hnrnpa0	68	63.743	Peromyscus_maniculatus_bairdii
ENSPLAG00000015223	-	65	50.754	ENSPMAG00000004449	-	74	54.386	Petromyzon_marinus
ENSPLAG00000015223	-	61	51.596	ENSPFOG00000014049	hnrnpa3	55	52.601	Poecilia_formosa
ENSPLAG00000015223	-	61	51.596	ENSPMEG00000006390	hnrnpa3	55	52.601	Poecilia_mexicana
ENSPLAG00000015223	-	57	70.455	ENSPMEG00000017025	HNRNPA0	92	72.189	Poecilia_mexicana
ENSPLAG00000015223	-	70	73.377	ENSPREG00000010619	HNRNPA0	73	73.377	Poecilia_reticulata
ENSPLAG00000015223	-	77	45.992	ENSPREG00000005411	hnrnpa3	61	53.216	Poecilia_reticulata
ENSPLAG00000015223	-	58	50.679	ENSPPYG00000015814	HNRNPA0	56	63.158	Pongo_abelii
ENSPLAG00000015223	-	57	53.448	ENSPPYG00000001012	-	60	53.757	Pongo_abelii
ENSPLAG00000015223	-	86	43.137	ENSPPYG00000012967	-	77	52.941	Pongo_abelii
ENSPLAG00000015223	-	56	52.907	ENSPNYG00000008424	hnrnpa3	74	52.601	Pundamilia_nyererei
ENSPLAG00000015223	-	56	70.690	ENSPNAG00000023333	HNRNPA0	59	71.098	Pygocentrus_nattereri
ENSPLAG00000015223	-	64	46.429	ENSRROG00000034643	-	53	45.946	Rhinopithecus_roxellana
ENSPLAG00000015223	-	65	55.276	ENSSFOG00015016280	hnrnpa1	94	49.180	Scleropages_formosus
ENSPLAG00000015223	-	56	77.778	ENSSFOG00015002650	HNRNPA0	54	77.778	Scleropages_formosus
ENSPLAG00000015223	-	59	54.396	ENSSFOG00015001814	hnrnpa3	95	47.756	Scleropages_formosus
ENSPLAG00000015223	-	61	51.064	ENSSDUG00000000381	hnrnpa3	93	47.670	Seriola_dumerili
ENSPLAG00000015223	-	61	51.596	ENSSPAG00000008969	hnrnpa3	53	52.601	Stegastes_partitus
ENSPLAG00000015223	-	90	83.453	ENSSPAG00000001272	-	74	83.453	Stegastes_partitus
ENSPLAG00000015223	-	56	61.988	ENSTGUG00000001186	HNRNPA0	57	61.988	Taeniopygia_guttata
ENSPLAG00000015223	-	56	78.736	ENSTRUG00000021494	-	93	74.101	Takifugu_rubripes
ENSPLAG00000015223	-	61	51.596	ENSTNIG00000016958	hnrnpa3	95	46.405	Tetraodon_nigroviridis
ENSPLAG00000015223	-	56	63.158	ENSVVUG00000014736	HNRNPA0	58	62.570	Vulpes_vulpes
ENSPLAG00000015223	-	61	55.319	ENSXETG00000001806	hnrnpa3	89	45.963	Xenopus_tropicalis
ENSPLAG00000015223	-	93	53.125	ENSXETG00000003833	hnrnpa0	55	65.116	Xenopus_tropicalis
ENSPLAG00000015223	-	96	98.990	ENSXMAG00000029150	HNRNPA0	99	98.990	Xiphophorus_maculatus
ENSPLAG00000015223	-	61	51.596	ENSXMAG00000000439	hnrnpa3	55	52.601	Xiphophorus_maculatus
ENSPLAG00000015223	-	57	70.455	ENSXMAG00000019804	HNRNPA0	90	72.189	Xiphophorus_maculatus