EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000015305 (Gene tree)
Gene ID: 106965063
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 14576 bases
Position: chrKQ547068.1:94700-109275
Accession: 106965063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000027039	RRM_1	PF00076.22	6.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000019658	-	1985	XM_015060950	ENSPLAP00000027039	306 (aa)	XP_014916436	UPI00072DCF2D

Gene Model

Click here to download ENSPLAG00000015305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000015305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000015305	-	82	76.680	ENSPLAG00000000061	-	86	74.113
ENSPLAG00000015305	-	69	51.327	ENSPLAG00000009877	-	57	51.339
ENSPLAG00000015305	-	70	56.087	ENSPLAG00000011323	ralyl	76	56.502

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000015305	-	73	53.982	ENSG00000184672	RALYL	91	76.623	Homo_sapiens
ENSPLAG00000015305	-	93	86.620	ENSAPOG00000006963	hnrnpc	92	86.972	Acanthochromis_polyacanthus
ENSPLAG00000015305	-	89	89.051	ENSACIG00000000270	-	99	86.102	Amphilophus_citrinellus
ENSPLAG00000015305	-	96	70.130	ENSACIG00000016568	-	90	75.627	Amphilophus_citrinellus
ENSPLAG00000015305	-	82	74.704	ENSAOCG00000021616	-	87	73.404	Amphiprion_ocellaris
ENSPLAG00000015305	-	93	86.268	ENSAOCG00000003896	-	92	86.620	Amphiprion_ocellaris
ENSPLAG00000015305	-	93	86.268	ENSAPEG00000001489	-	92	86.620	Amphiprion_percula
ENSPLAG00000015305	-	83	75.486	ENSAPEG00000019962	-	88	73.818	Amphiprion_percula
ENSPLAG00000015305	-	86	75.472	ENSATEG00000018006	-	76	83.732	Anabas_testudineus
ENSPLAG00000015305	-	100	85.113	ENSATEG00000011734	-	100	83.495	Anabas_testudineus
ENSPLAG00000015305	-	73	48.954	ENSAPLG00000015574	RALYL	75	52.889	Anas_platyrhynchos
ENSPLAG00000015305	-	73	48.117	ENSACAG00000028464	RALYL	74	52.000	Anolis_carolinensis
ENSPLAG00000015305	-	73	53.540	ENSANAG00000023383	RALYL	73	55.660	Aotus_nancymaae
ENSPLAG00000015305	-	87	74.539	ENSACLG00000005707	-	92	76.103	Astatotilapia_calliptera
ENSPLAG00000015305	-	100	85.993	ENSACLG00000000995	-	100	85.342	Astatotilapia_calliptera
ENSPLAG00000015305	-	100	85.668	ENSACLG00000013636	-	95	86.972	Astatotilapia_calliptera
ENSPLAG00000015305	-	68	70.952	ENSAMXG00000042946	hnrnpc	95	71.277	Astyanax_mexicanus
ENSPLAG00000015305	-	85	74.615	ENSAMXG00000034915	zgc:55733	91	74.340	Astyanax_mexicanus
ENSPLAG00000015305	-	73	53.540	ENSCJAG00000000402	RALYL	73	56.132	Callithrix_jacchus
ENSPLAG00000015305	-	87	46.099	ENSCPOG00000012314	RALYL	74	54.018	Cavia_porcellus
ENSPLAG00000015305	-	73	53.982	ENSCCAG00000025003	RALYL	75	76.623	Cebus_capucinus
ENSPLAG00000015305	-	73	53.982	ENSCATG00000042145	RALYL	73	56.132	Cercocebus_atys
ENSPLAG00000015305	-	73	50.420	ENSCLAG00000005228	RALYL	74	54.018	Chinchilla_lanigera
ENSPLAG00000015305	-	69	50.220	ENSCHOG00000013228	RALYL	74	49.778	Choloepus_hoffmanni
ENSPLAG00000015305	-	73	53.982	ENSCANG00000039144	RALYL	73	56.132	Colobus_angolensis_palliatus
ENSPLAG00000015305	-	73	49.372	ENSCGRG00001009241	Ralyl	74	53.333	Cricetulus_griseus_chok1gshd
ENSPLAG00000015305	-	77	76.371	ENSCSEG00000021349	-	84	71.324	Cynoglossus_semilaevis
ENSPLAG00000015305	-	71	78.440	ENSCSEG00000019769	-	70	78.846	Cynoglossus_semilaevis
ENSPLAG00000015305	-	82	79.216	ENSCVAG00000016981	-	87	72.378	Cyprinodon_variegatus
ENSPLAG00000015305	-	96	76.610	ENSCVAG00000002797	-	98	76.289	Cyprinodon_variegatus
ENSPLAG00000015305	-	91	75.269	ENSDARG00000103845	zgc:55733	94	76.336	Danio_rerio
ENSPLAG00000015305	-	79	73.663	ENSDARG00000053810	hnrnpc	86	72.101	Danio_rerio
ENSPLAG00000015305	-	73	49.791	ENSDORG00000003721	Ralyl	74	53.778	Dipodomys_ordii
ENSPLAG00000015305	-	53	54.286	ENSETEG00000014028	RALYL	86	56.977	Echinops_telfairi
ENSPLAG00000015305	-	70	47.162	ENSEBUG00000012363	hnrnpc	64	46.818	Eptatretus_burgeri
ENSPLAG00000015305	-	73	46.121	ENSEBUG00000006049	RALYL	93	41.455	Eptatretus_burgeri
ENSPLAG00000015305	-	73	50.209	ENSEEUG00000007202	RALYL	76	53.778	Erinaceus_europaeus
ENSPLAG00000015305	-	83	76.471	ENSELUG00000004132	-	93	73.913	Esox_lucius
ENSPLAG00000015305	-	81	78.030	ENSELUG00000007714	-	96	75.352	Esox_lucius
ENSPLAG00000015305	-	69	56.682	ENSFALG00000008647	RALYL	96	56.744	Ficedula_albicollis
ENSPLAG00000015305	-	83	74.725	ENSFHEG00000007278	-	90	68.896	Fundulus_heteroclitus
ENSPLAG00000015305	-	93	89.789	ENSFHEG00000003605	-	93	89.789	Fundulus_heteroclitus
ENSPLAG00000015305	-	73	52.193	ENSGALG00000036938	RALYL	74	52.889	Gallus_gallus
ENSPLAG00000015305	-	95	71.186	ENSGAFG00000020992	-	89	74.275	Gambusia_affinis
ENSPLAG00000015305	-	100	95.098	ENSGAFG00000020486	-	100	95.098	Gambusia_affinis
ENSPLAG00000015305	-	87	75.646	ENSGACG00000017772	-	99	73.881	Gasterosteus_aculeatus
ENSPLAG00000015305	-	71	68.750	ENSGACG00000018932	-	83	68.750	Gasterosteus_aculeatus
ENSPLAG00000015305	-	73	53.982	ENSGGOG00000000841	RALYL	73	56.132	Gorilla_gorilla
ENSPLAG00000015305	-	100	86.319	ENSHBUG00000018342	-	100	85.668	Haplochromis_burtoni
ENSPLAG00000015305	-	99	69.470	ENSHBUG00000010527	-	87	75.445	Haplochromis_burtoni
ENSPLAG00000015305	-	73	50.000	ENSHGLG00000004866	RALYL	74	53.571	Heterocephalus_glaber_female
ENSPLAG00000015305	-	73	50.000	ENSHGLG00100017480	RALYL	74	53.571	Heterocephalus_glaber_male
ENSPLAG00000015305	-	84	72.794	ENSHCOG00000012333	hnrnpc	95	69.388	Hippocampus_comes
ENSPLAG00000015305	-	84	75.676	ENSIPUG00000011271	hnrnpc	95	76.256	Ictalurus_punctatus
ENSPLAG00000015305	-	85	74.231	ENSIPUG00000008666	zgc:55733	91	78.846	Ictalurus_punctatus
ENSPLAG00000015305	-	73	49.372	ENSSTOG00000012583	RALYL	76	53.333	Ictidomys_tridecemlineatus
ENSPLAG00000015305	-	82	75.984	ENSKMAG00000018265	-	86	74.286	Kryptolebias_marmoratus
ENSPLAG00000015305	-	92	87.943	ENSKMAG00000011170	-	91	87.676	Kryptolebias_marmoratus
ENSPLAG00000015305	-	89	76.241	ENSLBEG00000024418	-	91	75.177	Labrus_bergylta
ENSPLAG00000015305	-	88	80.741	ENSLBEG00000006979	-	91	78.439	Labrus_bergylta
ENSPLAG00000015305	-	85	75.665	ENSLBEG00000006193	-	86	74.101	Labrus_bergylta
ENSPLAG00000015305	-	86	66.300	ENSLOCG00000002560	hnrnpc	93	68.248	Lepisosteus_oculatus
ENSPLAG00000015305	-	73	53.982	ENSMNEG00000033288	RALYL	73	56.132	Macaca_nemestrina
ENSPLAG00000015305	-	73	53.982	ENSMLEG00000038284	RALYL	73	56.132	Mandrillus_leucophaeus
ENSPLAG00000015305	-	93	84.211	ENSMAMG00000012236	-	92	85.614	Mastacembelus_armatus
ENSPLAG00000015305	-	86	75.655	ENSMAMG00000008033	-	94	74.182	Mastacembelus_armatus
ENSPLAG00000015305	-	99	69.470	ENSMZEG00005024249	-	87	75.445	Maylandia_zebra
ENSPLAG00000015305	-	100	85.993	ENSMZEG00005020460	-	100	85.342	Maylandia_zebra
ENSPLAG00000015305	-	73	49.372	ENSMAUG00000015149	Ralyl	74	53.333	Mesocricetus_auratus
ENSPLAG00000015305	-	73	53.304	ENSMICG00000005558	RALYL	78	76.623	Microcebus_murinus
ENSPLAG00000015305	-	73	49.372	ENSMOCG00000017371	Ralyl	74	53.333	Microtus_ochrogaster
ENSPLAG00000015305	-	83	84.706	ENSMMOG00000021465	-	93	84.211	Mola_mola
ENSPLAG00000015305	-	81	77.108	ENSMMOG00000019520	-	88	76.046	Mola_mola
ENSPLAG00000015305	-	83	75.686	ENSMALG00000007520	-	98	76.289	Monopterus_albus
ENSPLAG00000015305	-	86	79.167	ENSMALG00000014623	-	86	75.636	Monopterus_albus
ENSPLAG00000015305	-	73	48.954	ENSMUSG00000039717	Ralyl	91	75.325	Mus_musculus
ENSPLAG00000015305	-	73	50.628	ENSMPUG00000010724	RALYL	74	52.444	Mustela_putorius_furo
ENSPLAG00000015305	-	73	49.372	ENSNGAG00000013375	Ralyl	74	53.333	Nannospalax_galili
ENSPLAG00000015305	-	99	66.770	ENSNBRG00000015676	-	87	75.445	Neolamprologus_brichardi
ENSPLAG00000015305	-	95	84.564	ENSNBRG00000004912	-	89	88.104	Neolamprologus_brichardi
ENSPLAG00000015305	-	73	53.982	ENSNLEG00000002702	RALYL	70	56.132	Nomascus_leucogenys
ENSPLAG00000015305	-	58	47.423	ENSOPRG00000013650	-	98	46.392	Ochotona_princeps
ENSPLAG00000015305	-	73	50.840	ENSODEG00000001012	RALYL	74	54.018	Octodon_degus
ENSPLAG00000015305	-	92	83.624	ENSONIG00000007859	-	99	83.275	Oreochromis_niloticus
ENSPLAG00000015305	-	99	69.159	ENSONIG00000018350	-	87	75.089	Oreochromis_niloticus
ENSPLAG00000015305	-	82	74.330	ENSORLG00000003144	-	95	67.925	Oryzias_latipes
ENSPLAG00000015305	-	100	76.299	ENSORLG00000009999	-	100	75.649	Oryzias_latipes
ENSPLAG00000015305	-	100	75.974	ENSORLG00020018228	hnrnpc	100	75.325	Oryzias_latipes_hni
ENSPLAG00000015305	-	100	76.299	ENSORLG00015019755	-	100	75.649	Oryzias_latipes_hsok
ENSPLAG00000015305	-	82	74.330	ENSORLG00015009460	-	85	73.333	Oryzias_latipes_hsok
ENSPLAG00000015305	-	87	76.866	ENSOMEG00000020488	-	100	76.375	Oryzias_melastigma
ENSPLAG00000015305	-	82	77.165	ENSOMEG00000022665	-	86	76.344	Oryzias_melastigma
ENSPLAG00000015305	-	73	53.982	ENSPPAG00000038705	RALYL	73	56.132	Pan_paniscus
ENSPLAG00000015305	-	73	53.070	ENSPPRG00000018612	RALYL	73	55.140	Panthera_pardus
ENSPLAG00000015305	-	73	53.070	ENSPTIG00000020331	RALYL	73	55.140	Panthera_tigris_altaica
ENSPLAG00000015305	-	73	53.982	ENSPTRG00000020381	RALYL	73	56.132	Pan_troglodytes
ENSPLAG00000015305	-	73	53.982	ENSPANG00000029305	RALYL	73	56.132	Papio_anubis
ENSPLAG00000015305	-	91	73.519	ENSPKIG00000008592	-	87	74.729	Paramormyrops_kingsleyae
ENSPLAG00000015305	-	91	72.982	ENSPKIG00000022837	-	86	77.174	Paramormyrops_kingsleyae
ENSPLAG00000015305	-	73	48.954	ENSPSIG00000011135	RALYL	74	52.889	Pelodiscus_sinensis
ENSPLAG00000015305	-	71	84.793	ENSPMGG00000013144	-	78	81.731	Periophthalmus_magnuspinnatus
ENSPLAG00000015305	-	94	63.793	ENSPMGG00000017774	-	86	66.019	Periophthalmus_magnuspinnatus
ENSPLAG00000015305	-	73	49.372	ENSPEMG00000016447	Ralyl	74	53.333	Peromyscus_maniculatus_bairdii
ENSPLAG00000015305	-	69	52.632	ENSPMAG00000002407	RALYL	96	52.655	Petromyzon_marinus
ENSPLAG00000015305	-	100	97.720	ENSPFOG00000001583	-	100	97.720	Poecilia_formosa
ENSPLAG00000015305	-	95	69.055	ENSPFOG00000002643	-	87	74.113	Poecilia_formosa
ENSPLAG00000015305	-	100	97.712	ENSPMEG00000004802	-	100	97.712	Poecilia_mexicana
ENSPLAG00000015305	-	82	76.285	ENSPMEG00000016524	-	87	73.759	Poecilia_mexicana
ENSPLAG00000015305	-	100	94.771	ENSPREG00000007928	-	100	94.771	Poecilia_reticulata
ENSPLAG00000015305	-	82	75.889	ENSPREG00000001852	-	92	73.551	Poecilia_reticulata
ENSPLAG00000015305	-	73	45.946	ENSPPYG00000018710	-	67	46.154	Pongo_abelii
ENSPLAG00000015305	-	73	50.000	ENSPVAG00000010821	RALYL	78	51.271	Pteropus_vampyrus
ENSPLAG00000015305	-	87	74.539	ENSPNYG00000003747	-	91	75.547	Pundamilia_nyererei
ENSPLAG00000015305	-	91	86.643	ENSPNYG00000020293	-	92	86.989	Pundamilia_nyererei
ENSPLAG00000015305	-	81	74.194	ENSPNAG00000015686	hnrnpc	88	75.285	Pygocentrus_nattereri
ENSPLAG00000015305	-	85	71.269	ENSPNAG00000019200	zgc:55733	87	70.652	Pygocentrus_nattereri
ENSPLAG00000015305	-	73	53.982	ENSRROG00000023925	RALYL	80	74.684	Rhinopithecus_roxellana
ENSPLAG00000015305	-	83	74.427	ENSSFOG00015012924	-	78	92.208	Scleropages_formosus
ENSPLAG00000015305	-	93	65.965	ENSSFOG00015012015	-	80	81.818	Scleropages_formosus
ENSPLAG00000015305	-	84	73.180	ENSSMAG00000011147	-	96	70.260	Scophthalmus_maximus
ENSPLAG00000015305	-	93	83.217	ENSSMAG00000013592	-	91	83.566	Scophthalmus_maximus
ENSPLAG00000015305	-	93	86.268	ENSSDUG00000001723	-	100	83.442	Seriola_dumerili
ENSPLAG00000015305	-	98	72.115	ENSSDUG00000006730	-	87	75.725	Seriola_dumerili
ENSPLAG00000015305	-	86	78.030	ENSSLDG00000007474	-	92	75.836	Seriola_lalandi_dorsalis
ENSPLAG00000015305	-	91	86.022	ENSSLDG00000007454	-	92	85.816	Seriola_lalandi_dorsalis
ENSPLAG00000015305	-	92	86.833	ENSSPAG00000023204	-	92	87.324	Stegastes_partitus
ENSPLAG00000015305	-	98	70.476	ENSSPAG00000013996	-	87	74.286	Stegastes_partitus
ENSPLAG00000015305	-	71	50.000	ENSTGUG00000011689	RALYL	76	52.889	Taeniopygia_guttata
ENSPLAG00000015305	-	86	79.389	ENSTRUG00000020158	-	89	80.741	Takifugu_rubripes
ENSPLAG00000015305	-	83	75.096	ENSTNIG00000007427	-	88	74.182	Tetraodon_nigroviridis
ENSPLAG00000015305	-	83	73.438	ENSTNIG00000000334	-	98	73.408	Tetraodon_nigroviridis
ENSPLAG00000015305	-	70	46.154	ENSTBEG00000005551	RALYL	86	47.085	Tupaia_belangeri
ENSPLAG00000015305	-	73	49.145	ENSTTRG00000015762	RALYL	74	52.273	Tursiops_truncatus
ENSPLAG00000015305	-	73	48.458	ENSVPAG00000008501	RALYL	74	51.869	Vicugna_pacos
ENSPLAG00000015305	-	51	84.146	ENSXCOG00000019434	-	71	82.249	Xiphophorus_couchianus
ENSPLAG00000015305	-	88	87.407	ENSXCOG00000006552	-	86	88.636	Xiphophorus_couchianus
ENSPLAG00000015305	-	82	75.889	ENSXMAG00000022849	-	89	73.551	Xiphophorus_maculatus
ENSPLAG00000015305	-	100	94.771	ENSXMAG00000009333	-	100	94.771	Xiphophorus_maculatus