EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000015623 (Gene tree)
Gene ID: 106960388
Gene Symbol: trnt1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 14933 bases
Position: chrKQ546497.1:101021-115953
Accession: 106960388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000012334	PolyA_pol	PF01743.20	3.9e-34	1	1
ENSPLAP00000012340	PolyA_pol	PF01743.20	4.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000019996	-	3078	XM_015053468	ENSPLAP00000012340	427 (aa)	XP_014908954	UPI00072E9F88
ENSPLAT00000019974	-	3094	XM_015053470	ENSPLAP00000012334	404 (aa)	XP_014908956	UPI000444233B

Gene Model

Click here to download ENSPLAG00000015623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000015623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000015623	trnt1	99	68.983	ENSG00000072756	TRNT1	94	69.212	Homo_sapiens
ENSPLAG00000015623	trnt1	99	85.075	ENSAPOG00000013687	trnt1	99	83.412	Acanthochromis_polyacanthus
ENSPLAG00000015623	trnt1	99	67.901	ENSAMEG00000014520	TRNT1	94	68.137	Ailuropoda_melanoleuca
ENSPLAG00000015623	trnt1	99	86.600	ENSACIG00000021706	trnt1	99	85.071	Amphilophus_citrinellus
ENSPLAG00000015623	trnt1	99	87.593	ENSAOCG00000024612	trnt1	99	85.816	Amphiprion_ocellaris
ENSPLAG00000015623	trnt1	96	80.155	ENSAPEG00000022627	trnt1	95	78.676	Amphiprion_percula
ENSPLAG00000015623	trnt1	99	87.097	ENSATEG00000008928	trnt1	99	87.097	Anabas_testudineus
ENSPLAG00000015623	trnt1	95	72.063	ENSAPLG00000004258	TRNT1	95	72.063	Anas_platyrhynchos
ENSPLAG00000015623	trnt1	99	67.742	ENSACAG00000005657	TRNT1	95	66.346	Anolis_carolinensis
ENSPLAG00000015623	trnt1	99	68.486	ENSANAG00000024802	TRNT1	94	68.719	Aotus_nancymaae
ENSPLAG00000015623	trnt1	100	84.406	ENSACLG00000022227	trnt1	99	82.547	Astatotilapia_calliptera
ENSPLAG00000015623	trnt1	99	79.104	ENSAMXG00000003960	trnt1	98	77.305	Astyanax_mexicanus
ENSPLAG00000015623	trnt1	99	67.246	ENSBTAG00000019534	TRNT1	94	67.322	Bos_taurus
ENSPLAG00000015623	trnt1	99	43.237	WBGene00010089	hpo-31	94	43.373	Caenorhabditis_elegans
ENSPLAG00000015623	trnt1	99	68.734	ENSCJAG00000015466	TRNT1	94	68.966	Callithrix_jacchus
ENSPLAG00000015623	trnt1	99	68.734	ENSCAFG00000005985	TRNT1	93	68.966	Canis_familiaris
ENSPLAG00000015623	trnt1	99	68.734	ENSCAFG00020014746	TRNT1	93	68.966	Canis_lupus_dingo
ENSPLAG00000015623	trnt1	99	67.990	ENSCHIG00000007030	TRNT1	95	66.986	Capra_hircus
ENSPLAG00000015623	trnt1	99	69.479	ENSTSYG00000013390	TRNT1	94	69.704	Carlito_syrichta
ENSPLAG00000015623	trnt1	93	55.053	ENSCAPG00000006891	TRNT1	99	54.787	Cavia_aperea
ENSPLAG00000015623	trnt1	99	67.494	ENSCPOG00000007849	TRNT1	94	67.734	Cavia_porcellus
ENSPLAG00000015623	trnt1	98	69.192	ENSCCAG00000002919	TRNT1	98	68.957	Cebus_capucinus
ENSPLAG00000015623	trnt1	99	69.479	ENSCATG00000031985	TRNT1	92	69.704	Cercocebus_atys
ENSPLAG00000015623	trnt1	99	67.990	ENSCLAG00000005186	TRNT1	84	79.330	Chinchilla_lanigera
ENSPLAG00000015623	trnt1	99	69.479	ENSCSAG00000011052	TRNT1	94	69.704	Chlorocebus_sabaeus
ENSPLAG00000015623	trnt1	83	78.613	ENSCHOG00000005712	TRNT1	78	78.977	Choloepus_hoffmanni
ENSPLAG00000015623	trnt1	99	70.471	ENSCPBG00000017636	TRNT1	93	70.343	Chrysemys_picta_bellii
ENSPLAG00000015623	trnt1	99	40.741	ENSCING00000007069	-	99	40.741	Ciona_intestinalis
ENSPLAG00000015623	trnt1	99	41.832	ENSCSAVG00000007494	-	95	41.832	Ciona_savignyi
ENSPLAG00000015623	trnt1	99	69.727	ENSCANG00000039030	TRNT1	94	69.951	Colobus_angolensis_palliatus
ENSPLAG00000015623	trnt1	99	68.734	ENSCGRG00001009998	Trnt1	94	69.118	Cricetulus_griseus_chok1gshd
ENSPLAG00000015623	trnt1	99	68.734	ENSCGRG00000013410	Trnt1	86	79.121	Cricetulus_griseus_crigri
ENSPLAG00000015623	trnt1	100	81.436	ENSCSEG00000008157	trnt1	98	80.622	Cynoglossus_semilaevis
ENSPLAG00000015623	trnt1	99	89.578	ENSCVAG00000019770	trnt1	99	88.571	Cyprinodon_variegatus
ENSPLAG00000015623	trnt1	99	80.750	ENSDARG00000075297	trnt1	98	78.622	Danio_rerio
ENSPLAG00000015623	trnt1	99	70.223	ENSDNOG00000008837	TRNT1	94	70.098	Dasypus_novemcinctus
ENSPLAG00000015623	trnt1	99	68.734	ENSDORG00000014035	Trnt1	94	68.627	Dipodomys_ordii
ENSPLAG00000015623	trnt1	99	49.257	FBgn0037369	CG2100	83	49.257	Drosophila_melanogaster
ENSPLAG00000015623	trnt1	59	73.529	ENSETEG00000018177	TRNT1	97	73.859	Echinops_telfairi
ENSPLAG00000015623	trnt1	99	64.677	ENSEBUG00000012779	-	95	64.677	Eptatretus_burgeri
ENSPLAG00000015623	trnt1	99	69.727	ENSEASG00005003577	TRNT1	94	69.951	Equus_asinus_asinus
ENSPLAG00000015623	trnt1	99	69.975	ENSECAG00000014420	TRNT1	94	70.197	Equus_caballus
ENSPLAG00000015623	trnt1	99	68.734	ENSEEUG00000009567	TRNT1	94	68.627	Erinaceus_europaeus
ENSPLAG00000015623	trnt1	99	82.338	ENSELUG00000003802	trnt1	99	79.953	Esox_lucius
ENSPLAG00000015623	trnt1	99	68.486	ENSFCAG00000026805	TRNT1	93	68.719	Felis_catus
ENSPLAG00000015623	trnt1	95	71.802	ENSFALG00000013539	TRNT1	99	71.802	Ficedula_albicollis
ENSPLAG00000015623	trnt1	99	67.494	ENSFDAG00000018412	TRNT1	94	67.734	Fukomys_damarensis
ENSPLAG00000015623	trnt1	99	89.082	ENSFHEG00000019294	trnt1	99	88.361	Fundulus_heteroclitus
ENSPLAG00000015623	trnt1	99	81.592	ENSGMOG00000007460	trnt1	99	79.433	Gadus_morhua
ENSPLAG00000015623	trnt1	99	69.479	ENSGALG00000017368	TRNT1	97	67.458	Gallus_gallus
ENSPLAG00000015623	trnt1	100	96.535	ENSGAFG00000008647	trnt1	99	96.209	Gambusia_affinis
ENSPLAG00000015623	trnt1	99	83.871	ENSGACG00000011903	trnt1	99	82.506	Gasterosteus_aculeatus
ENSPLAG00000015623	trnt1	99	71.712	ENSGAGG00000020942	TRNT1	93	71.569	Gopherus_agassizii
ENSPLAG00000015623	trnt1	99	69.231	ENSGGOG00000015286	TRNT1	94	69.458	Gorilla_gorilla
ENSPLAG00000015623	trnt1	100	84.653	ENSHBUG00000002797	trnt1	99	82.783	Haplochromis_burtoni
ENSPLAG00000015623	trnt1	99	67.494	ENSHGLG00000003649	TRNT1	94	67.647	Heterocephalus_glaber_female
ENSPLAG00000015623	trnt1	99	63.524	ENSHGLG00000000221	-	94	63.391	Heterocephalus_glaber_female
ENSPLAG00000015623	trnt1	99	66.501	ENSHGLG00100016421	TRNT1	94	66.667	Heterocephalus_glaber_male
ENSPLAG00000015623	trnt1	99	77.916	ENSHCOG00000010618	trnt1	99	76.540	Hippocampus_comes
ENSPLAG00000015623	trnt1	99	78.856	ENSIPUG00000000971	trnt1	94	78.624	Ictalurus_punctatus
ENSPLAG00000015623	trnt1	99	68.983	ENSSTOG00000000150	TRNT1	86	79.330	Ictidomys_tridecemlineatus
ENSPLAG00000015623	trnt1	99	68.486	ENSJJAG00000018561	Trnt1	94	68.627	Jaculus_jaculus
ENSPLAG00000015623	trnt1	100	86.634	ENSKMAG00000011307	trnt1	96	86.375	Kryptolebias_marmoratus
ENSPLAG00000015623	trnt1	96	78.351	ENSLBEG00000019457	trnt1	96	76.961	Labrus_bergylta
ENSPLAG00000015623	trnt1	99	71.891	ENSLACG00000013227	TRNT1	94	71.990	Latimeria_chalumnae
ENSPLAG00000015623	trnt1	99	74.938	ENSLOCG00000011105	trnt1	99	71.991	Lepisosteus_oculatus
ENSPLAG00000015623	trnt1	99	68.983	ENSLAFG00000023191	TRNT1	94	69.212	Loxodonta_africana
ENSPLAG00000015623	trnt1	99	69.479	ENSMFAG00000045113	TRNT1	92	69.704	Macaca_fascicularis
ENSPLAG00000015623	trnt1	99	69.479	ENSMMUG00000017983	TRNT1	92	69.704	Macaca_mulatta
ENSPLAG00000015623	trnt1	99	69.479	ENSMNEG00000037805	TRNT1	92	69.704	Macaca_nemestrina
ENSPLAG00000015623	trnt1	95	70.419	ENSMLEG00000033671	TRNT1	99	70.419	Mandrillus_leucophaeus
ENSPLAG00000015623	trnt1	99	85.112	ENSMAMG00000023401	trnt1	99	83.688	Mastacembelus_armatus
ENSPLAG00000015623	trnt1	100	84.406	ENSMZEG00005009141	trnt1	99	82.547	Maylandia_zebra
ENSPLAG00000015623	trnt1	79	67.398	ENSMGAG00000009971	TRNT1	99	67.398	Meleagris_gallopavo
ENSPLAG00000015623	trnt1	99	68.734	ENSMAUG00000020707	Trnt1	94	68.873	Mesocricetus_auratus
ENSPLAG00000015623	trnt1	99	69.231	ENSMICG00000016615	TRNT1	94	69.363	Microcebus_murinus
ENSPLAG00000015623	trnt1	99	68.734	ENSMOCG00000004539	Trnt1	94	68.873	Microtus_ochrogaster
ENSPLAG00000015623	trnt1	99	82.630	ENSMMOG00000010742	trnt1	96	82.598	Mola_mola
ENSPLAG00000015623	trnt1	99	68.734	ENSMODG00000004368	TRNT1	94	68.627	Monodelphis_domestica
ENSPLAG00000015623	trnt1	99	81.886	ENSMALG00000008376	trnt1	96	81.752	Monopterus_albus
ENSPLAG00000015623	trnt1	99	68.734	MGP_CAROLIEiJ_G0028698	Trnt1	90	74.590	Mus_caroli
ENSPLAG00000015623	trnt1	99	68.486	ENSMUSG00000013736	Trnt1	83	80.447	Mus_musculus
ENSPLAG00000015623	trnt1	99	69.975	MGP_PahariEiJ_G0022449	Trnt1	88	81.564	Mus_pahari
ENSPLAG00000015623	trnt1	99	68.734	MGP_SPRETEiJ_G0029726	Trnt1	83	80.447	Mus_spretus
ENSPLAG00000015623	trnt1	99	68.238	ENSMPUG00000017017	TRNT1	93	68.473	Mustela_putorius_furo
ENSPLAG00000015623	trnt1	95	69.792	ENSMLUG00000011864	TRNT1	99	69.792	Myotis_lucifugus
ENSPLAG00000015623	trnt1	99	68.238	ENSNGAG00000000537	Trnt1	94	68.382	Nannospalax_galili
ENSPLAG00000015623	trnt1	80	84.830	ENSNBRG00000023606	trnt1	99	82.507	Neolamprologus_brichardi
ENSPLAG00000015623	trnt1	99	69.479	ENSNLEG00000003226	TRNT1	94	69.704	Nomascus_leucogenys
ENSPLAG00000015623	trnt1	99	68.238	ENSMEUG00000004684	TRNT1	94	68.137	Notamacropus_eugenii
ENSPLAG00000015623	trnt1	95	66.230	ENSOPRG00000015067	TRNT1	99	66.230	Ochotona_princeps
ENSPLAG00000015623	trnt1	99	68.238	ENSODEG00000007597	TRNT1	99	65.893	Octodon_degus
ENSPLAG00000015623	trnt1	99	85.608	ENSONIG00000020273	trnt1	94	85.819	Oreochromis_niloticus
ENSPLAG00000015623	trnt1	99	65.757	ENSOANG00000007514	TRNT1	97	64.218	Ornithorhynchus_anatinus
ENSPLAG00000015623	trnt1	99	67.246	ENSOCUG00000008580	TRNT1	94	67.488	Oryctolagus_cuniculus
ENSPLAG00000015623	trnt1	100	82.673	ENSORLG00000003165	trnt1	97	82.641	Oryzias_latipes
ENSPLAG00000015623	trnt1	100	83.168	ENSORLG00020022060	trnt1	97	83.130	Oryzias_latipes_hni
ENSPLAG00000015623	trnt1	100	82.921	ENSORLG00015018915	trnt1	96	82.885	Oryzias_latipes_hsok
ENSPLAG00000015623	trnt1	100	79.208	ENSOMEG00000003331	trnt1	99	77.910	Oryzias_melastigma
ENSPLAG00000015623	trnt1	99	67.990	ENSOARG00000008631	TRNT1	95	66.986	Ovis_aries
ENSPLAG00000015623	trnt1	99	68.983	ENSPPAG00000043566	TRNT1	94	69.212	Pan_paniscus
ENSPLAG00000015623	trnt1	99	68.238	ENSPPRG00000001327	TRNT1	93	68.473	Panthera_pardus
ENSPLAG00000015623	trnt1	99	68.238	ENSPTIG00000011448	TRNT1	93	68.473	Panthera_tigris_altaica
ENSPLAG00000015623	trnt1	99	68.983	ENSPTRG00000014564	TRNT1	94	69.212	Pan_troglodytes
ENSPLAG00000015623	trnt1	99	69.479	ENSPANG00000025944	TRNT1	92	69.704	Papio_anubis
ENSPLAG00000015623	trnt1	99	77.363	ENSPKIG00000020015	trnt1	98	75.887	Paramormyrops_kingsleyae
ENSPLAG00000015623	trnt1	98	71.139	ENSPSIG00000017356	TRNT1	99	71.389	Pelodiscus_sinensis
ENSPLAG00000015623	trnt1	99	80.149	ENSPMGG00000008888	trnt1	98	78.487	Periophthalmus_magnuspinnatus
ENSPLAG00000015623	trnt1	99	68.734	ENSPEMG00000019845	Trnt1	94	68.873	Peromyscus_maniculatus_bairdii
ENSPLAG00000015623	trnt1	99	69.479	ENSPCIG00000030436	TRNT1	94	69.363	Phascolarctos_cinereus
ENSPLAG00000015623	trnt1	100	100.000	ENSPFOG00000006194	trnt1	100	99.766	Poecilia_formosa
ENSPLAG00000015623	trnt1	100	99.257	ENSPMEG00000012216	trnt1	100	99.257	Poecilia_mexicana
ENSPLAG00000015623	trnt1	100	98.762	ENSPREG00000021470	trnt1	99	98.341	Poecilia_reticulata
ENSPLAG00000015623	trnt1	99	68.734	ENSPPYG00000013702	TRNT1	94	68.873	Pongo_abelii
ENSPLAG00000015623	trnt1	95	70.419	ENSPCAG00000001951	TRNT1	99	70.419	Procavia_capensis
ENSPLAG00000015623	trnt1	99	68.983	ENSPCOG00000022228	TRNT1	94	69.212	Propithecus_coquereli
ENSPLAG00000015623	trnt1	95	69.372	ENSPVAG00000008784	TRNT1	99	69.372	Pteropus_vampyrus
ENSPLAG00000015623	trnt1	100	84.158	ENSPNYG00000003120	trnt1	99	82.311	Pundamilia_nyererei
ENSPLAG00000015623	trnt1	99	79.104	ENSPNAG00000000565	trnt1	98	77.305	Pygocentrus_nattereri
ENSPLAG00000015623	trnt1	99	69.231	ENSRNOG00000006432	Trnt1	94	69.363	Rattus_norvegicus
ENSPLAG00000015623	trnt1	99	68.486	ENSRBIG00000042632	TRNT1	93	68.719	Rhinopithecus_bieti
ENSPLAG00000015623	trnt1	99	69.479	ENSRROG00000036866	TRNT1	94	69.704	Rhinopithecus_roxellana
ENSPLAG00000015623	trnt1	99	68.734	ENSSBOG00000021208	TRNT1	94	68.966	Saimiri_boliviensis_boliviensis
ENSPLAG00000015623	trnt1	99	67.990	ENSSHAG00000018861	TRNT1	94	68.227	Sarcophilus_harrisii
ENSPLAG00000015623	trnt1	99	77.612	ENSSFOG00015020844	trnt1	94	77.206	Scleropages_formosus
ENSPLAG00000015623	trnt1	99	85.608	ENSSMAG00000015432	trnt1	97	83.452	Scophthalmus_maximus
ENSPLAG00000015623	trnt1	99	85.856	ENSSDUG00000012320	trnt1	99	83.924	Seriola_dumerili
ENSPLAG00000015623	trnt1	99	85.608	ENSSLDG00000009325	trnt1	99	83.688	Seriola_lalandi_dorsalis
ENSPLAG00000015623	trnt1	60	82.573	ENSSLDG00000016463	-	91	82.845	Seriola_lalandi_dorsalis
ENSPLAG00000015623	trnt1	95	71.204	ENSSPUG00000014153	TRNT1	99	71.204	Sphenodon_punctatus
ENSPLAG00000015623	trnt1	99	85.112	ENSSPAG00000021005	trnt1	99	83.215	Stegastes_partitus
ENSPLAG00000015623	trnt1	99	68.486	ENSSSCG00000011529	TRNT1	94	68.293	Sus_scrofa
ENSPLAG00000015623	trnt1	99	70.720	ENSTGUG00000010192	TRNT1	99	70.792	Taeniopygia_guttata
ENSPLAG00000015623	trnt1	99	82.878	ENSTRUG00000001088	trnt1	99	80.851	Takifugu_rubripes
ENSPLAG00000015623	trnt1	99	83.127	ENSTNIG00000007363	trnt1	99	80.140	Tetraodon_nigroviridis
ENSPLAG00000015623	trnt1	59	60.504	ENSTBEG00000006367	TRNT1	80	60.996	Tupaia_belangeri
ENSPLAG00000015623	trnt1	99	67.494	ENSTTRG00000007803	TRNT1	94	67.813	Tursiops_truncatus
ENSPLAG00000015623	trnt1	99	68.486	ENSUAMG00000022574	TRNT1	93	68.719	Ursus_americanus
ENSPLAG00000015623	trnt1	99	68.238	ENSUMAG00000024092	TRNT1	93	68.473	Ursus_maritimus
ENSPLAG00000015623	trnt1	99	68.734	ENSVVUG00000012810	TRNT1	93	68.966	Vulpes_vulpes
ENSPLAG00000015623	trnt1	99	62.935	ENSXETG00000025091	trnt1	99	62.935	Xenopus_tropicalis
ENSPLAG00000015623	trnt1	100	95.545	ENSXCOG00000010150	trnt1	99	95.498	Xiphophorus_couchianus
ENSPLAG00000015623	trnt1	100	96.535	ENSXMAG00000002227	trnt1	99	96.445	Xiphophorus_maculatus