EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000015969 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3653 bases
Position: chrLMXD01041202.1:5198-8850
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000027396	RRM_1	PF00076.22	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000029635	-	369	-	ENSPLAP00000027396	122 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000015969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000015969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000015969	-	74	50.000	ENSPLAG00000020810	ELAVL1	72	49.383
ENSPLAG00000015969	-	79	41.860	ENSPLAG00000001547	elavl3	68	41.860
ENSPLAG00000015969	-	75	93.478	ENSPLAG00000013524	-	74	93.478
ENSPLAG00000015969	-	100	100.000	ENSPLAG00000000224	-	100	100.000
ENSPLAG00000015969	-	69	41.975	ENSPLAG00000005203	ELAVL2	63	41.975
ENSPLAG00000015969	-	69	45.679	ENSPLAG00000008127	elavl1a	67	45.679
ENSPLAG00000015969	-	68	40.741	ENSPLAG00000008085	elavl4	62	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000015969	-	89	93.519	ENSACAG00000006079	-	50	92.308	Anolis_carolinensis
ENSPLAG00000015969	-	75	93.478	ENSAMXG00000034719	-	74	93.478	Astyanax_mexicanus
ENSPLAG00000015969	-	74	88.889	ENSBTAG00000051439	-	57	88.889	Bos_taurus
ENSPLAG00000015969	-	96	82.906	ENSCHIG00000009150	-	97	82.203	Capra_hircus
ENSPLAG00000015969	-	89	93.519	ENSCVAG00000018670	si:dkey-205h23.2	52	91.525	Cyprinodon_variegatus
ENSPLAG00000015969	-	96	83.761	ENSECAG00000036983	-	89	83.761	Equus_caballus
ENSPLAG00000015969	-	74	96.667	ENSGALG00000048972	-	83	96.667	Gallus_gallus
ENSPLAG00000015969	-	78	57.895	ENSNBRG00000010123	-	75	65.000	Neolamprologus_brichardi
ENSPLAG00000015969	-	57	91.304	ENSOANG00000031583	-	100	91.304	Ornithorhynchus_anatinus
ENSPLAG00000015969	-	89	84.259	ENSPTIG00000005413	-	91	81.513	Panthera_tigris_altaica
ENSPLAG00000015969	-	75	93.478	ENSPKIG00000024667	-	74	93.478	Paramormyrops_kingsleyae
ENSPLAG00000015969	-	75	93.478	ENSPMEG00000011603	-	74	93.478	Poecilia_mexicana
ENSPLAG00000015969	-	56	72.059	ENSPNYG00000011502	-	50	86.792	Pundamilia_nyererei
ENSPLAG00000015969	-	89	93.519	ENSSLDG00000015995	-	50	91.525	Seriola_lalandi_dorsalis
ENSPLAG00000015969	-	89	84.259	ENSUAMG00000025729	-	97	82.203	Ursus_americanus
ENSPLAG00000015969	-	89	84.259	ENSUMAG00000008820	-	97	82.203	Ursus_maritimus
ENSPLAG00000015969	-	96	82.906	ENSVVUG00000018262	-	90	82.906	Vulpes_vulpes
ENSPLAG00000015969	-	73	88.764	ENSVVUG00000003252	-	77	88.764	Vulpes_vulpes