EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000016078 (Gene tree)
Gene ID: 106958008
Gene Symbol: rbm28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 13377 bases
Position: chrKQ546270.1:55389-68765
Accession: 106958008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000012709	RRM_1	PF00076.22	1.9e-59	1	3
ENSPLAP00000012709	RRM_1	PF00076.22	1.9e-59	2	3
ENSPLAP00000012709	RRM_1	PF00076.22	1.9e-59	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000020477	-	2645	XM_015049654	ENSPLAP00000012709	788 (aa)	XP_014905140	-

Gene Model

Click here to download ENSPLAG00000016078's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000016078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000016078	rbm28	96	50.193	ENSG00000106344	RBM28	100	48.293	Homo_sapiens
ENSPLAG00000016078	rbm28	55	72.644	ENSAPOG00000015512	rbm28	58	72.422	Acanthochromis_polyacanthus
ENSPLAG00000016078	rbm28	94	58.947	ENSAMEG00000004776	RBM28	66	58.974	Ailuropoda_melanoleuca
ENSPLAG00000016078	rbm28	53	70.238	ENSACIG00000023153	rbm28	90	70.238	Amphilophus_citrinellus
ENSPLAG00000016078	rbm28	55	72.644	ENSAOCG00000000462	rbm28	99	66.448	Amphiprion_ocellaris
ENSPLAG00000016078	rbm28	55	72.414	ENSAPEG00000012996	rbm28	99	66.317	Amphiprion_percula
ENSPLAG00000016078	rbm28	56	64.557	ENSATEG00000001672	rbm28	61	64.557	Anabas_testudineus
ENSPLAG00000016078	rbm28	87	65.000	ENSANAG00000033922	RBM28	80	65.000	Aotus_nancymaae
ENSPLAG00000016078	rbm28	96	64.146	ENSACLG00000025024	rbm28	59	72.707	Astatotilapia_calliptera
ENSPLAG00000016078	rbm28	55	62.093	ENSAMXG00000000763	rbm28	96	62.558	Astyanax_mexicanus
ENSPLAG00000016078	rbm28	87	65.000	ENSBTAG00000017001	RBM28	80	65.000	Bos_taurus
ENSPLAG00000016078	rbm28	96	50.453	ENSCJAG00000017731	RBM28	79	65.000	Callithrix_jacchus
ENSPLAG00000016078	rbm28	96	49.022	ENSCAFG00000001667	RBM28	58	54.831	Canis_familiaris
ENSPLAG00000016078	rbm28	96	49.022	ENSCAFG00020021648	RBM28	58	54.831	Canis_lupus_dingo
ENSPLAG00000016078	rbm28	60	53.459	ENSCHIG00000014146	RBM28	58	54.688	Capra_hircus
ENSPLAG00000016078	rbm28	63	62.500	ENSTSYG00000002892	RBM28	78	62.500	Carlito_syrichta
ENSPLAG00000016078	rbm28	80	39.213	ENSCAPG00000013218	RBM28	84	49.640	Cavia_aperea
ENSPLAG00000016078	rbm28	96	49.612	ENSCPOG00000006253	RBM28	57	55.909	Cavia_porcellus
ENSPLAG00000016078	rbm28	75	65.000	ENSCCAG00000035105	RBM28	79	65.000	Cebus_capucinus
ENSPLAG00000016078	rbm28	96	48.799	ENSCATG00000040497	RBM28	79	65.000	Cercocebus_atys
ENSPLAG00000016078	rbm28	96	47.570	ENSCLAG00000003707	RBM28	60	55.481	Chinchilla_lanigera
ENSPLAG00000016078	rbm28	96	49.742	ENSCSAG00000010161	RBM28	57	55.631	Chlorocebus_sabaeus
ENSPLAG00000016078	rbm28	54	56.800	ENSCHOG00000001994	-	63	56.800	Choloepus_hoffmanni
ENSPLAG00000016078	rbm28	87	49.180	ENSCANG00000038397	RBM28	76	65.000	Colobus_angolensis_palliatus
ENSPLAG00000016078	rbm28	62	53.374	ENSCGRG00001021278	Rbm28	56	55.034	Cricetulus_griseus_chok1gshd
ENSPLAG00000016078	rbm28	62	53.374	ENSCGRG00000005098	Rbm28	58	55.257	Cricetulus_griseus_crigri
ENSPLAG00000016078	rbm28	95	61.691	ENSCSEG00000004212	rbm28	58	70.023	Cynoglossus_semilaevis
ENSPLAG00000016078	rbm28	57	82.774	ENSCVAG00000010493	rbm28	99	77.094	Cyprinodon_variegatus
ENSPLAG00000016078	rbm28	86	60.274	ENSDARG00000025332	rbm28	76	60.739	Danio_rerio
ENSPLAG00000016078	rbm28	61	51.951	ENSDNOG00000001124	RBM28	57	53.708	Dasypus_novemcinctus
ENSPLAG00000016078	rbm28	71	51.509	ENSDORG00000004184	Rbm28	86	54.343	Dipodomys_ordii
ENSPLAG00000016078	rbm28	54	49.173	ENSETEG00000007130	RBM28	55	49.173	Echinops_telfairi
ENSPLAG00000016078	rbm28	95	38.391	ENSEBUG00000004419	rbm28	58	42.857	Eptatretus_burgeri
ENSPLAG00000016078	rbm28	61	52.642	ENSEASG00005008528	RBM28	57	55.180	Equus_asinus_asinus
ENSPLAG00000016078	rbm28	61	52.236	ENSECAG00000007745	RBM28	57	54.730	Equus_caballus
ENSPLAG00000016078	rbm28	96	47.865	ENSEEUG00000002389	RBM28	83	59.596	Erinaceus_europaeus
ENSPLAG00000016078	rbm28	96	55.939	ENSELUG00000020602	rbm28	58	61.135	Esox_lucius
ENSPLAG00000016078	rbm28	96	49.805	ENSFCAG00000000946	RBM28	81	65.000	Felis_catus
ENSPLAG00000016078	rbm28	96	50.000	ENSFDAG00000010169	RBM28	58	54.545	Fukomys_damarensis
ENSPLAG00000016078	rbm28	55	60.046	ENSGMOG00000007091	rbm28	59	60.046	Gadus_morhua
ENSPLAG00000016078	rbm28	57	91.946	ENSGAFG00000004802	rbm28	98	91.946	Gambusia_affinis
ENSPLAG00000016078	rbm28	55	70.046	ENSGACG00000012612	rbm28	98	61.383	Gasterosteus_aculeatus
ENSPLAG00000016078	rbm28	78	53.266	ENSGAGG00000008873	RBM28	86	58.173	Gopherus_agassizii
ENSPLAG00000016078	rbm28	91	49.389	ENSGGOG00000004644	RBM28	59	55.405	Gorilla_gorilla
ENSPLAG00000016078	rbm28	91	65.517	ENSHBUG00000009611	rbm28	56	74.020	Haplochromis_burtoni
ENSPLAG00000016078	rbm28	96	49.935	ENSHGLG00000005409	RBM28	58	54.018	Heterocephalus_glaber_female
ENSPLAG00000016078	rbm28	96	49.935	ENSHGLG00100016458	RBM28	58	54.018	Heterocephalus_glaber_male
ENSPLAG00000016078	rbm28	79	58.730	ENSHCOG00000010597	rbm28	83	56.085	Hippocampus_comes
ENSPLAG00000016078	rbm28	59	44.776	ENSIPUG00000007103	rbm28	78	48.201	Ictalurus_punctatus
ENSPLAG00000016078	rbm28	96	50.000	ENSSTOG00000002169	RBM28	57	54.324	Ictidomys_tridecemlineatus
ENSPLAG00000016078	rbm28	53	53.791	ENSJJAG00000022400	Rbm28	58	54.028	Jaculus_jaculus
ENSPLAG00000016078	rbm28	56	73.767	ENSKMAG00000013348	rbm28	99	66.667	Kryptolebias_marmoratus
ENSPLAG00000016078	rbm28	56	70.112	ENSLBEG00000012998	rbm28	99	63.764	Labrus_bergylta
ENSPLAG00000016078	rbm28	96	58.763	ENSLOCG00000015541	rbm28	75	61.333	Lepisosteus_oculatus
ENSPLAG00000016078	rbm28	96	50.129	ENSLAFG00000010717	RBM28	57	54.977	Loxodonta_africana
ENSPLAG00000016078	rbm28	68	65.000	ENSMFAG00000031036	RBM28	79	65.000	Macaca_fascicularis
ENSPLAG00000016078	rbm28	68	65.000	ENSMMUG00000007250	RBM28	79	65.000	Macaca_mulatta
ENSPLAG00000016078	rbm28	96	50.262	ENSMNEG00000036970	RBM28	78	65.000	Macaca_nemestrina
ENSPLAG00000016078	rbm28	81	50.518	ENSMLEG00000037717	RBM28	56	59.184	Mandrillus_leucophaeus
ENSPLAG00000016078	rbm28	96	66.362	ENSMAMG00000008525	rbm28	99	65.971	Mastacembelus_armatus
ENSPLAG00000016078	rbm28	89	62.745	ENSMZEG00005019625	rbm28	63	72.707	Maylandia_zebra
ENSPLAG00000016078	rbm28	62	52.236	ENSMAUG00000002263	Rbm28	56	54.484	Mesocricetus_auratus
ENSPLAG00000016078	rbm28	62	52.000	ENSMICG00000000107	RBM28	60	55.882	Microcebus_murinus
ENSPLAG00000016078	rbm28	96	49.550	ENSMOCG00000014615	Rbm28	58	54.867	Microtus_ochrogaster
ENSPLAG00000016078	rbm28	55	64.989	ENSMMOG00000008600	rbm28	88	64.989	Mola_mola
ENSPLAG00000016078	rbm28	60	54.507	ENSMODG00000015151	RBM28	56	57.240	Monodelphis_domestica
ENSPLAG00000016078	rbm28	56	69.888	ENSMALG00000006419	rbm28	57	69.888	Monopterus_albus
ENSPLAG00000016078	rbm28	96	50.458	MGP_CAROLIEiJ_G0028162	Rbm28	58	55.405	Mus_caroli
ENSPLAG00000016078	rbm28	96	50.260	ENSMUSG00000029701	Rbm28	58	56.081	Mus_musculus
ENSPLAG00000016078	rbm28	96	51.765	MGP_PahariEiJ_G0021920	Rbm28	58	56.306	Mus_pahari
ENSPLAG00000016078	rbm28	96	50.585	MGP_SPRETEiJ_G0029162	Rbm28	58	55.631	Mus_spretus
ENSPLAG00000016078	rbm28	96	48.590	ENSMPUG00000006511	RBM28	57	54.362	Mustela_putorius_furo
ENSPLAG00000016078	rbm28	62	52.846	ENSMLUG00000002186	RBM28	57	54.607	Myotis_lucifugus
ENSPLAG00000016078	rbm28	96	47.556	ENSNGAG00000017946	-	56	52.982	Nannospalax_galili
ENSPLAG00000016078	rbm28	96	48.681	ENSNGAG00000006480	-	58	54.566	Nannospalax_galili
ENSPLAG00000016078	rbm28	66	65.000	ENSNLEG00000012307	RBM28	79	65.000	Nomascus_leucogenys
ENSPLAG00000016078	rbm28	78	57.595	ENSMEUG00000009611	RBM28	81	59.119	Notamacropus_eugenii
ENSPLAG00000016078	rbm28	96	46.424	ENSODEG00000003213	-	56	52.125	Octodon_degus
ENSPLAG00000016078	rbm28	73	55.890	ENSODEG00000013217	-	82	57.614	Octodon_degus
ENSPLAG00000016078	rbm28	56	73.438	ENSONIG00000014924	rbm28	58	73.884	Oreochromis_niloticus
ENSPLAG00000016078	rbm28	58	49.356	ENSOANG00000000815	-	58	50.224	Ornithorhynchus_anatinus
ENSPLAG00000016078	rbm28	96	49.486	ENSOCUG00000003009	RBM28	57	55.204	Oryctolagus_cuniculus
ENSPLAG00000016078	rbm28	96	64.829	ENSORLG00000009636	rbm28	58	71.300	Oryzias_latipes
ENSPLAG00000016078	rbm28	56	71.111	ENSORLG00020002123	rbm28	61	71.111	Oryzias_latipes_hni
ENSPLAG00000016078	rbm28	82	70.936	ENSORLG00015015030	rbm28	99	70.936	Oryzias_latipes_hsok
ENSPLAG00000016078	rbm28	56	72.260	ENSOMEG00000007801	rbm28	59	72.260	Oryzias_melastigma
ENSPLAG00000016078	rbm28	66	62.500	ENSOGAG00000006011	RBM28	78	62.500	Otolemur_garnettii
ENSPLAG00000016078	rbm28	96	50.327	ENSOARG00000002547	RBM28	58	54.688	Ovis_aries
ENSPLAG00000016078	rbm28	96	49.100	ENSPPAG00000041730	RBM28	79	65.000	Pan_paniscus
ENSPLAG00000016078	rbm28	96	49.805	ENSPPRG00000004420	RBM28	81	65.000	Panthera_pardus
ENSPLAG00000016078	rbm28	96	49.419	ENSPTIG00000008550	RBM28	81	65.000	Panthera_tigris_altaica
ENSPLAG00000016078	rbm28	96	49.229	ENSPTRG00000019659	RBM28	79	65.000	Pan_troglodytes
ENSPLAG00000016078	rbm28	96	48.747	ENSPANG00000022295	RBM28	79	65.000	Papio_anubis
ENSPLAG00000016078	rbm28	95	54.545	ENSPKIG00000023453	rbm28	60	56.930	Paramormyrops_kingsleyae
ENSPLAG00000016078	rbm28	81	64.858	ENSPMGG00000012840	rbm28	93	64.858	Periophthalmus_magnuspinnatus
ENSPLAG00000016078	rbm28	87	51.006	ENSPCIG00000012810	RBM28	57	54.628	Phascolarctos_cinereus
ENSPLAG00000016078	rbm28	96	97.244	ENSPFOG00000018209	rbm28	99	97.244	Poecilia_formosa
ENSPLAG00000016078	rbm28	96	96.982	ENSPMEG00000004292	rbm28	99	96.982	Poecilia_mexicana
ENSPLAG00000016078	rbm28	96	91.350	ENSPREG00000014287	rbm28	99	93.316	Poecilia_reticulata
ENSPLAG00000016078	rbm28	96	50.129	ENSPPYG00000017975	RBM28	57	55.180	Pongo_abelii
ENSPLAG00000016078	rbm28	70	52.089	ENSPCAG00000008223	RBM28	82	51.913	Procavia_capensis
ENSPLAG00000016078	rbm28	67	65.000	ENSPCOG00000016797	RBM28	76	65.000	Propithecus_coquereli
ENSPLAG00000016078	rbm28	72	60.369	ENSPVAG00000005443	RBM28	66	63.682	Pteropus_vampyrus
ENSPLAG00000016078	rbm28	96	64.453	ENSPNYG00000014003	rbm28	59	72.991	Pundamilia_nyererei
ENSPLAG00000016078	rbm28	96	50.065	ENSRNOG00000005468	Rbm28	85	55.708	Rattus_norvegicus
ENSPLAG00000016078	rbm28	68	65.000	ENSRBIG00000033990	RBM28	79	65.000	Rhinopithecus_bieti
ENSPLAG00000016078	rbm28	68	65.000	ENSRROG00000040747	RBM28	79	65.000	Rhinopithecus_roxellana
ENSPLAG00000016078	rbm28	87	43.500	ENSSBOG00000012308	RBM28	71	57.711	Saimiri_boliviensis_boliviensis
ENSPLAG00000016078	rbm28	91	49.256	ENSSHAG00000017017	RBM28	59	56.264	Sarcophilus_harrisii
ENSPLAG00000016078	rbm28	95	54.244	ENSSFOG00015001231	rbm28	59	59.234	Scleropages_formosus
ENSPLAG00000016078	rbm28	63	60.672	ENSSMAG00000003885	rbm28	89	66.147	Scophthalmus_maximus
ENSPLAG00000016078	rbm28	56	73.378	ENSSDUG00000014270	rbm28	87	73.438	Seriola_dumerili
ENSPLAG00000016078	rbm28	56	72.483	ENSSLDG00000020099	rbm28	58	72.545	Seriola_lalandi_dorsalis
ENSPLAG00000016078	rbm28	71	58.556	ENSSARG00000008303	RBM28	80	56.965	Sorex_araneus
ENSPLAG00000016078	rbm28	65	51.899	ENSSPUG00000000838	RBM28	81	52.116	Sphenodon_punctatus
ENSPLAG00000016078	rbm28	55	71.946	ENSSPAG00000023305	rbm28	61	72.444	Stegastes_partitus
ENSPLAG00000016078	rbm28	96	49.871	ENSSSCG00000031847	RBM28	58	55.408	Sus_scrofa
ENSPLAG00000016078	rbm28	56	64.653	ENSTRUG00000013311	rbm28	57	64.653	Takifugu_rubripes
ENSPLAG00000016078	rbm28	96	57.526	ENSTNIG00000017962	rbm28	59	67.261	Tetraodon_nigroviridis
ENSPLAG00000016078	rbm28	68	55.556	ENSTBEG00000012749	RBM28	72	54.438	Tupaia_belangeri
ENSPLAG00000016078	rbm28	96	49.683	ENSTTRG00000013647	RBM28	92	54.867	Tursiops_truncatus
ENSPLAG00000016078	rbm28	96	46.701	ENSUAMG00000006949	RBM28	59	50.223	Ursus_americanus
ENSPLAG00000016078	rbm28	96	48.649	ENSUMAG00000005997	RBM28	57	54.607	Ursus_maritimus
ENSPLAG00000016078	rbm28	82	45.789	ENSVPAG00000008304	RBM28	58	49.664	Vicugna_pacos
ENSPLAG00000016078	rbm28	96	48.892	ENSVVUG00000007270	RBM28	58	54.607	Vulpes_vulpes
ENSPLAG00000016078	rbm28	59	50.833	ENSXETG00000009271	rbm28	57	53.363	Xenopus_tropicalis
ENSPLAG00000016078	rbm28	56	86.456	ENSXCOG00000020357	rbm28	91	86.456	Xiphophorus_couchianus
ENSPLAG00000016078	rbm28	57	93.065	ENSXMAG00000004415	rbm28	59	93.065	Xiphophorus_maculatus