EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000016295 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: -
Full Name: si:ch211-153b23.4
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 3002 bases
Position: chrKQ548634.1:45317-48318
Accession: ZDB-GENE-030131-7332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000012883	Sua5_yciO_yrdC	PF01300.18	5.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000020715	-	2398	-	ENSPLAP00000012883	799 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000016295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000016295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000016295	si:ch211-153b23.4	80	30.408	ENSPLAG00000016320	si:ch211-153b23.3	74	30.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000016295	si:ch211-153b23.4	95	83.290	ENSAPOG00000006178	si:ch211-153b23.4	89	83.290	Acanthochromis_polyacanthus
ENSPLAG00000016295	si:ch211-153b23.4	97	82.134	ENSAPOG00000006144	si:ch211-153b23.4	89	83.202	Acanthochromis_polyacanthus
ENSPLAG00000016295	si:ch211-153b23.4	98	83.838	ENSACIG00000006997	si:ch211-153b23.4	93	83.838	Amphilophus_citrinellus
ENSPLAG00000016295	si:ch211-153b23.4	97	78.599	ENSAOCG00000010999	si:ch211-153b23.4	95	78.599	Amphiprion_ocellaris
ENSPLAG00000016295	si:ch211-153b23.4	99	79.825	ENSAPEG00000014665	si:ch211-153b23.4	94	79.825	Amphiprion_percula
ENSPLAG00000016295	si:ch211-153b23.4	99	82.214	ENSATEG00000004948	si:ch211-153b23.4	92	82.214	Anabas_testudineus
ENSPLAG00000016295	si:ch211-153b23.4	99	59.627	ENSAPLG00000013596	-	97	59.627	Anas_platyrhynchos
ENSPLAG00000016295	si:ch211-153b23.4	99	80.348	ENSACLG00000005471	si:ch211-153b23.4	91	80.348	Astatotilapia_calliptera
ENSPLAG00000016295	si:ch211-153b23.4	80	31.674	ENSAMXG00000038564	si:ch211-153b23.3	74	31.674	Astyanax_mexicanus
ENSPLAG00000016295	si:ch211-153b23.4	100	72.478	ENSAMXG00000013879	si:ch211-153b23.4	95	72.478	Astyanax_mexicanus
ENSPLAG00000016295	si:ch211-153b23.4	99	78.980	ENSCSEG00000014838	si:ch211-153b23.4	95	78.980	Cynoglossus_semilaevis
ENSPLAG00000016295	si:ch211-153b23.4	64	33.459	ENSCSEG00000014853	si:ch211-153b23.3	58	33.459	Cynoglossus_semilaevis
ENSPLAG00000016295	si:ch211-153b23.4	99	91.635	ENSCVAG00000021145	si:ch211-153b23.4	99	91.635	Cyprinodon_variegatus
ENSPLAG00000016295	si:ch211-153b23.4	100	68.820	ENSDARG00000077169	si:ch211-153b23.4	92	68.820	Danio_rerio
ENSPLAG00000016295	si:ch211-153b23.4	80	30.804	ENSDARG00000104919	si:ch211-153b23.3	74	30.804	Danio_rerio
ENSPLAG00000016295	si:ch211-153b23.4	100	70.792	ENSELUG00000004961	si:ch211-153b23.4	91	70.792	Esox_lucius
ENSPLAG00000016295	si:ch211-153b23.4	99	56.929	ENSFALG00000011343	-	92	56.929	Ficedula_albicollis
ENSPLAG00000016295	si:ch211-153b23.4	99	91.092	ENSFHEG00000010001	si:ch211-153b23.4	99	91.092	Fundulus_heteroclitus
ENSPLAG00000016295	si:ch211-153b23.4	84	96.373	ENSFHEG00000009888	si:ch211-153b23.4	75	96.373	Fundulus_heteroclitus
ENSPLAG00000016295	si:ch211-153b23.4	93	95.194	ENSGAFG00000007442	si:ch211-153b23.4	90	95.225	Gambusia_affinis
ENSPLAG00000016295	si:ch211-153b23.4	80	31.373	ENSGAFG00000007455	si:ch211-153b23.3	74	31.373	Gambusia_affinis
ENSPLAG00000016295	si:ch211-153b23.4	100	79.876	ENSGACG00000018253	si:ch211-153b23.4	95	79.876	Gasterosteus_aculeatus
ENSPLAG00000016295	si:ch211-153b23.4	86	63.362	ENSGAGG00000024601	-	93	63.362	Gopherus_agassizii
ENSPLAG00000016295	si:ch211-153b23.4	84	79.822	ENSHBUG00000000013	si:ch211-153b23.4	89	79.822	Haplochromis_burtoni
ENSPLAG00000016295	si:ch211-153b23.4	99	70.683	ENSIPUG00000015205	si:ch211-153b23.4	96	70.683	Ictalurus_punctatus
ENSPLAG00000016295	si:ch211-153b23.4	80	30.349	ENSIPUG00000015213	si:ch211-153b23.3	75	30.349	Ictalurus_punctatus
ENSPLAG00000016295	si:ch211-153b23.4	80	30.849	ENSKMAG00000006792	si:ch211-153b23.3	74	30.849	Kryptolebias_marmoratus
ENSPLAG00000016295	si:ch211-153b23.4	99	86.194	ENSKMAG00000006919	-	91	86.194	Kryptolebias_marmoratus
ENSPLAG00000016295	si:ch211-153b23.4	99	86.759	ENSKMAG00000006829	si:ch211-153b23.4	98	86.759	Kryptolebias_marmoratus
ENSPLAG00000016295	si:ch211-153b23.4	99	81.592	ENSLBEG00000026309	si:ch211-153b23.4	92	81.592	Labrus_bergylta
ENSPLAG00000016295	si:ch211-153b23.4	99	63.524	ENSLACG00000017592	si:ch211-153b23.4	96	63.524	Latimeria_chalumnae
ENSPLAG00000016295	si:ch211-153b23.4	99	84.145	ENSMAMG00000009358	si:ch211-153b23.4	98	84.145	Mastacembelus_armatus
ENSPLAG00000016295	si:ch211-153b23.4	99	83.794	ENSMAMG00000009277	si:ch211-153b23.4	96	83.794	Mastacembelus_armatus
ENSPLAG00000016295	si:ch211-153b23.4	64	32.258	ENSMAMG00000009328	si:ch211-153b23.3	58	32.258	Mastacembelus_armatus
ENSPLAG00000016295	si:ch211-153b23.4	99	80.524	ENSMZEG00005011433	si:ch211-153b23.4	98	80.524	Maylandia_zebra
ENSPLAG00000016295	si:ch211-153b23.4	99	59.900	ENSMGAG00000005478	-	97	59.900	Meleagris_gallopavo
ENSPLAG00000016295	si:ch211-153b23.4	99	81.101	ENSMMOG00000004425	si:ch211-153b23.4	99	81.101	Mola_mola
ENSPLAG00000016295	si:ch211-153b23.4	99	80.353	ENSNBRG00000013392	si:ch211-153b23.4	100	80.353	Neolamprologus_brichardi
ENSPLAG00000016295	si:ch211-153b23.4	99	80.473	ENSONIG00000017875	si:ch211-153b23.4	92	80.473	Oreochromis_niloticus
ENSPLAG00000016295	si:ch211-153b23.4	99	81.071	ENSORLG00000006169	si:ch211-153b23.4	92	81.071	Oryzias_latipes
ENSPLAG00000016295	si:ch211-153b23.4	80	30.723	ENSORLG00000006161	si:ch211-153b23.3	76	30.572	Oryzias_latipes
ENSPLAG00000016295	si:ch211-153b23.4	99	81.694	ENSORLG00020009905	si:ch211-153b23.4	92	81.694	Oryzias_latipes_hni
ENSPLAG00000016295	si:ch211-153b23.4	99	81.196	ENSORLG00015003709	si:ch211-153b23.4	92	81.196	Oryzias_latipes_hsok
ENSPLAG00000016295	si:ch211-153b23.4	80	30.317	ENSOMEG00000007661	si:ch211-153b23.3	76	30.166	Oryzias_melastigma
ENSPLAG00000016295	si:ch211-153b23.4	99	80.970	ENSOMEG00000007682	si:ch211-153b23.4	91	80.970	Oryzias_melastigma
ENSPLAG00000016295	si:ch211-153b23.4	100	66.998	ENSPKIG00000014429	si:ch211-153b23.4	95	66.833	Paramormyrops_kingsleyae
ENSPLAG00000016295	si:ch211-153b23.4	99	70.932	ENSPKIG00000025681	si:ch211-153b23.4	93	70.932	Paramormyrops_kingsleyae
ENSPLAG00000016295	si:ch211-153b23.4	52	35.748	ENSPKIG00000022450	si:ch211-153b23.3	50	35.129	Paramormyrops_kingsleyae
ENSPLAG00000016295	si:ch211-153b23.4	97	63.532	ENSPMGG00000001313	si:ch211-153b23.4	85	64.267	Periophthalmus_magnuspinnatus
ENSPLAG00000016295	si:ch211-153b23.4	80	30.920	ENSPFOG00000012289	si:ch211-153b23.3	74	30.920	Poecilia_formosa
ENSPLAG00000016295	si:ch211-153b23.4	84	98.222	ENSPFOG00000012164	si:ch211-153b23.4	95	98.222	Poecilia_formosa
ENSPLAG00000016295	si:ch211-153b23.4	97	95.769	ENSPMEG00000007538	si:ch211-153b23.4	95	95.769	Poecilia_mexicana
ENSPLAG00000016295	si:ch211-153b23.4	80	30.769	ENSPMEG00000008884	si:ch211-153b23.3	74	30.769	Poecilia_mexicana
ENSPLAG00000016295	si:ch211-153b23.4	99	80.275	ENSPNYG00000000250	si:ch211-153b23.4	98	80.275	Pundamilia_nyererei
ENSPLAG00000016295	si:ch211-153b23.4	100	72.119	ENSPNAG00000019554	si:ch211-153b23.4	91	72.119	Pygocentrus_nattereri
ENSPLAG00000016295	si:ch211-153b23.4	80	30.873	ENSPNAG00000019592	si:ch211-153b23.3	74	30.781	Pygocentrus_nattereri
ENSPLAG00000016295	si:ch211-153b23.4	100	67.564	ENSSFOG00015003920	-	93	67.564	Scleropages_formosus
ENSPLAG00000016295	si:ch211-153b23.4	64	33.144	ENSSFOG00015010910	si:ch211-153b23.3	60	33.144	Scleropages_formosus
ENSPLAG00000016295	si:ch211-153b23.4	100	71.553	ENSSFOG00015010891	si:ch211-153b23.4	93	71.553	Scleropages_formosus
ENSPLAG00000016295	si:ch211-153b23.4	51	36.603	ENSSFOG00015009030	-	65	36.364	Scleropages_formosus
ENSPLAG00000016295	si:ch211-153b23.4	99	81.219	ENSSMAG00000010067	si:ch211-153b23.4	93	81.219	Scophthalmus_maximus
ENSPLAG00000016295	si:ch211-153b23.4	83	80.655	ENSSDUG00000006931	si:ch211-153b23.4	92	80.655	Seriola_dumerili
ENSPLAG00000016295	si:ch211-153b23.4	99	82.397	ENSSDUG00000006671	si:ch211-153b23.4	99	82.397	Seriola_dumerili
ENSPLAG00000016295	si:ch211-153b23.4	99	58.032	ENSSDUG00000006842	si:ch211-153b23.4	93	57.410	Seriola_dumerili
ENSPLAG00000016295	si:ch211-153b23.4	99	59.651	ENSTGUG00000005499	-	98	59.651	Taeniopygia_guttata
ENSPLAG00000016295	si:ch211-153b23.4	53	34.651	ENSTRUG00000020530	si:ch211-153b23.3	77	30.000	Takifugu_rubripes
ENSPLAG00000016295	si:ch211-153b23.4	99	78.207	ENSTRUG00000003247	si:ch211-153b23.4	99	78.207	Takifugu_rubripes
ENSPLAG00000016295	si:ch211-153b23.4	99	76.770	ENSTNIG00000008958	si:ch211-153b23.4	97	76.770	Tetraodon_nigroviridis
ENSPLAG00000016295	si:ch211-153b23.4	99	54.753	ENSXETG00000004489	-	91	54.753	Xenopus_tropicalis
ENSPLAG00000016295	si:ch211-153b23.4	99	96.000	ENSXMAG00000009416	-	94	96.000	Xiphophorus_maculatus
ENSPLAG00000016295	si:ch211-153b23.4	80	30.827	ENSXMAG00000029318	si:ch211-153b23.3	74	30.827	Xiphophorus_maculatus
ENSPLAG00000016295	si:ch211-153b23.4	99	95.647	ENSXMAG00000021388	si:ch211-153b23.4	96	95.647	Xiphophorus_maculatus