EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000016320 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: uncharacterized LOC106940816
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3532 bases
Position: chrKQ548634.1:20932-24463
Accession: 106940816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000012903	Sua5_yciO_yrdC	PF01300.18	4.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000020730	-	2632	XM_015023644	ENSPLAP00000012903	877 (aa)	XP_014879130	-

Gene Model

Click here to download ENSPLAG00000016320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000016320's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000016320	si:ch211-153b23.3	74	30.408	ENSPLAG00000016295	si:ch211-153b23.4	80	30.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000016320	si:ch211-153b23.3	59	32.453	ENSAPOG00000006178	si:ch211-153b23.4	59	32.453	Acanthochromis_polyacanthus
ENSPLAG00000016320	si:ch211-153b23.3	59	32.453	ENSAPOG00000006144	si:ch211-153b23.4	60	32.453	Acanthochromis_polyacanthus
ENSPLAG00000016320	si:ch211-153b23.3	100	74.886	ENSACIG00000006968	si:ch211-153b23.3	99	74.886	Amphilophus_citrinellus
ENSPLAG00000016320	si:ch211-153b23.3	100	85.131	ENSAOCG00000010974	si:ch211-153b23.3	99	85.131	Amphiprion_ocellaris
ENSPLAG00000016320	si:ch211-153b23.3	59	32.184	ENSAPEG00000014665	si:ch211-153b23.4	59	32.184	Amphiprion_percula
ENSPLAG00000016320	si:ch211-153b23.3	100	84.790	ENSAPEG00000014700	si:ch211-153b23.3	99	84.790	Amphiprion_percula
ENSPLAG00000016320	si:ch211-153b23.3	100	80.568	ENSATEG00000004956	si:ch211-153b23.3	99	80.568	Anabas_testudineus
ENSPLAG00000016320	si:ch211-153b23.3	59	33.776	ENSACLG00000005471	si:ch211-153b23.4	58	33.776	Astatotilapia_calliptera
ENSPLAG00000016320	si:ch211-153b23.3	100	80.795	ENSACLG00000005894	si:ch211-153b23.3	99	80.795	Astatotilapia_calliptera
ENSPLAG00000016320	si:ch211-153b23.3	59	33.270	ENSAMXG00000013879	si:ch211-153b23.4	77	30.435	Astyanax_mexicanus
ENSPLAG00000016320	si:ch211-153b23.3	100	71.493	ENSAMXG00000038564	si:ch211-153b23.3	99	71.722	Astyanax_mexicanus
ENSPLAG00000016320	si:ch211-153b23.3	100	79.342	ENSCSEG00000014853	si:ch211-153b23.3	100	79.342	Cynoglossus_semilaevis
ENSPLAG00000016320	si:ch211-153b23.3	100	92.360	ENSCVAG00000021124	si:ch211-153b23.3	99	92.360	Cyprinodon_variegatus
ENSPLAG00000016320	si:ch211-153b23.3	74	30.422	ENSCVAG00000021145	si:ch211-153b23.4	80	30.422	Cyprinodon_variegatus
ENSPLAG00000016320	si:ch211-153b23.3	100	71.251	ENSDARG00000104919	si:ch211-153b23.3	99	71.251	Danio_rerio
ENSPLAG00000016320	si:ch211-153b23.3	80	85.047	ENSELUG00000004912	si:ch211-153b23.3	99	85.047	Esox_lucius
ENSPLAG00000016320	si:ch211-153b23.3	100	92.588	ENSFHEG00000010030	si:ch211-153b23.3	99	92.588	Fundulus_heteroclitus
ENSPLAG00000016320	si:ch211-153b23.3	74	30.030	ENSFHEG00000010001	si:ch211-153b23.4	80	30.030	Fundulus_heteroclitus
ENSPLAG00000016320	si:ch211-153b23.3	100	96.123	ENSGAFG00000007455	si:ch211-153b23.3	99	96.123	Gambusia_affinis
ENSPLAG00000016320	si:ch211-153b23.3	58	32.952	ENSGACG00000018253	si:ch211-153b23.4	60	32.952	Gasterosteus_aculeatus
ENSPLAG00000016320	si:ch211-153b23.3	100	81.023	ENSHBUG00000001760	si:ch211-153b23.3	99	81.023	Haplochromis_burtoni
ENSPLAG00000016320	si:ch211-153b23.3	55	32.932	ENSHBUG00000000013	si:ch211-153b23.4	64	33.333	Haplochromis_burtoni
ENSPLAG00000016320	si:ch211-153b23.3	100	70.843	ENSIPUG00000015213	si:ch211-153b23.3	99	70.843	Ictalurus_punctatus
ENSPLAG00000016320	si:ch211-153b23.3	59	33.270	ENSKMAG00000006919	-	58	33.270	Kryptolebias_marmoratus
ENSPLAG00000016320	si:ch211-153b23.3	100	85.291	ENSKMAG00000006792	si:ch211-153b23.3	99	85.291	Kryptolebias_marmoratus
ENSPLAG00000016320	si:ch211-153b23.3	58	32.890	ENSKMAG00000006829	si:ch211-153b23.4	63	32.890	Kryptolebias_marmoratus
ENSPLAG00000016320	si:ch211-153b23.3	59	32.386	ENSLBEG00000026309	si:ch211-153b23.4	59	32.386	Labrus_bergylta
ENSPLAG00000016320	si:ch211-153b23.3	100	80.839	ENSLBEG00000026324	si:ch211-153b23.3	99	80.839	Labrus_bergylta
ENSPLAG00000016320	si:ch211-153b23.3	94	57.432	ENSLACG00000005800	-	99	57.788	Latimeria_chalumnae
ENSPLAG00000016320	si:ch211-153b23.3	84	53.061	ENSLOCG00000015063	si:ch211-153b23.3	98	53.061	Lepisosteus_oculatus
ENSPLAG00000016320	si:ch211-153b23.3	100	82.386	ENSMAMG00000009328	si:ch211-153b23.3	99	82.386	Mastacembelus_armatus
ENSPLAG00000016320	si:ch211-153b23.3	100	80.909	ENSMZEG00005011450	si:ch211-153b23.3	99	80.909	Maylandia_zebra
ENSPLAG00000016320	si:ch211-153b23.3	59	33.207	ENSMZEG00005011433	si:ch211-153b23.4	63	33.207	Maylandia_zebra
ENSPLAG00000016320	si:ch211-153b23.3	100	80.861	ENSMMOG00000004436	si:ch211-153b23.3	99	80.861	Mola_mola
ENSPLAG00000016320	si:ch211-153b23.3	59	33.524	ENSMMOG00000004425	si:ch211-153b23.4	64	33.143	Mola_mola
ENSPLAG00000016320	si:ch211-153b23.3	100	81.136	ENSNBRG00000013370	si:ch211-153b23.3	99	81.136	Neolamprologus_brichardi
ENSPLAG00000016320	si:ch211-153b23.3	59	33.017	ENSNBRG00000013392	si:ch211-153b23.4	64	33.017	Neolamprologus_brichardi
ENSPLAG00000016320	si:ch211-153b23.3	59	33.586	ENSONIG00000017875	si:ch211-153b23.4	59	33.586	Oreochromis_niloticus
ENSPLAG00000016320	si:ch211-153b23.3	59	32.762	ENSORLG00000006169	si:ch211-153b23.4	59	32.762	Oryzias_latipes
ENSPLAG00000016320	si:ch211-153b23.3	100	80.813	ENSORLG00000006161	si:ch211-153b23.3	99	80.813	Oryzias_latipes
ENSPLAG00000016320	si:ch211-153b23.3	97	81.871	ENSORLG00020000910	si:ch211-153b23.3	100	81.871	Oryzias_latipes_hni
ENSPLAG00000016320	si:ch211-153b23.3	97	81.447	ENSORLG00015003698	si:ch211-153b23.3	100	81.447	Oryzias_latipes_hsok
ENSPLAG00000016320	si:ch211-153b23.3	59	33.143	ENSORLG00015003709	si:ch211-153b23.4	59	33.143	Oryzias_latipes_hsok
ENSPLAG00000016320	si:ch211-153b23.3	100	82.054	ENSOMEG00000007661	si:ch211-153b23.3	99	82.054	Oryzias_melastigma
ENSPLAG00000016320	si:ch211-153b23.3	99	49.834	ENSPKIG00000021029	-	99	49.834	Paramormyrops_kingsleyae
ENSPLAG00000016320	si:ch211-153b23.3	97	72.125	ENSPKIG00000022450	si:ch211-153b23.3	100	72.125	Paramormyrops_kingsleyae
ENSPLAG00000016320	si:ch211-153b23.3	82	79.592	ENSPMGG00000001311	si:ch211-153b23.3	99	82.979	Periophthalmus_magnuspinnatus
ENSPLAG00000016320	si:ch211-153b23.3	74	30.435	ENSPFOG00000012164	si:ch211-153b23.4	90	30.435	Poecilia_formosa
ENSPLAG00000016320	si:ch211-153b23.3	100	98.416	ENSPFOG00000012289	si:ch211-153b23.3	99	98.416	Poecilia_formosa
ENSPLAG00000016320	si:ch211-153b23.3	58	33.270	ENSPMEG00000007538	si:ch211-153b23.4	63	33.270	Poecilia_mexicana
ENSPLAG00000016320	si:ch211-153b23.3	100	99.088	ENSPMEG00000008884	si:ch211-153b23.3	99	99.088	Poecilia_mexicana
ENSPLAG00000016320	si:ch211-153b23.3	100	80.795	ENSPNYG00000000251	si:ch211-153b23.3	99	80.795	Pundamilia_nyererei
ENSPLAG00000016320	si:ch211-153b23.3	59	33.207	ENSPNYG00000000250	si:ch211-153b23.4	63	33.207	Pundamilia_nyererei
ENSPLAG00000016320	si:ch211-153b23.3	59	32.892	ENSPNAG00000019554	si:ch211-153b23.4	58	32.892	Pygocentrus_nattereri
ENSPLAG00000016320	si:ch211-153b23.3	100	72.893	ENSPNAG00000019592	si:ch211-153b23.3	99	72.893	Pygocentrus_nattereri
ENSPLAG00000016320	si:ch211-153b23.3	68	51.050	ENSSFOG00015009030	-	96	51.050	Scleropages_formosus
ENSPLAG00000016320	si:ch211-153b23.3	100	72.778	ENSSFOG00015010910	si:ch211-153b23.3	99	72.778	Scleropages_formosus
ENSPLAG00000016320	si:ch211-153b23.3	59	32.768	ENSSFOG00015010891	si:ch211-153b23.4	59	32.768	Scleropages_formosus
ENSPLAG00000016320	si:ch211-153b23.3	99	83.504	ENSSMAG00000005446	si:ch211-153b23.3	100	83.504	Scophthalmus_maximus
ENSPLAG00000016320	si:ch211-153b23.3	59	32.514	ENSSDUG00000006671	si:ch211-153b23.4	63	32.136	Seriola_dumerili
ENSPLAG00000016320	si:ch211-153b23.3	100	84.014	ENSSLDG00000008629	si:ch211-153b23.3	99	84.014	Seriola_lalandi_dorsalis
ENSPLAG00000016320	si:ch211-153b23.3	53	33.817	ENSTGUG00000005499	-	57	33.817	Taeniopygia_guttata
ENSPLAG00000016320	si:ch211-153b23.3	99	76.720	ENSTRUG00000020530	si:ch211-153b23.3	99	77.064	Takifugu_rubripes
ENSPLAG00000016320	si:ch211-153b23.3	93	80.682	ENSTNIG00000008962	si:ch211-153b23.3	99	80.682	Tetraodon_nigroviridis
ENSPLAG00000016320	si:ch211-153b23.3	59	33.397	ENSXMAG00000009416	-	60	33.397	Xiphophorus_maculatus
ENSPLAG00000016320	si:ch211-153b23.3	59	33.397	ENSXMAG00000021388	si:ch211-153b23.4	62	33.397	Xiphophorus_maculatus
ENSPLAG00000016320	si:ch211-153b23.3	100	96.123	ENSXMAG00000029318	si:ch211-153b23.3	99	96.123	Xiphophorus_maculatus