EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000016333 (Gene tree)
Gene ID
106949789
Gene Symbol
-
Alias
-
Full Name
ras-related protein Rab-5C-like
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Plus strand
Length
12019 bases
Position
chrKQ545337.1:524544-536562
Accession
106949789
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000012907MMR_HSR1PF01926.230.0001811
ENSPLAP00000027605MMR_HSR1PF01926.230.0001911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000020759-2243XM_015036290ENSPLAP00000027605223 (aa)XP_014891776UPI00072E0BBC
ENSPLAT00000020741-657-ENSPLAP00000012907218 (aa)--
Gene Model
Click here to download ENSPLAG00000016333's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000016333's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000016333-8738.624ENSPLAG00000004551-8738.624
ENSPLAG00000016333-8841.584ENSPLAG00000007986rab11al7347.771
ENSPLAG00000016333-7231.875ENSPLAG00000005074rab34b6331.875
ENSPLAG00000016333-7744.643ENSPLAG00000015383rab308344.643
ENSPLAG00000016333-7333.750ENSPLAG00000011697rab237436.184
ENSPLAG00000016333-8938.500ENSPLAG00000001065-9638.500
ENSPLAG00000016333-8837.313ENSPLAG00000021043si:dkey-16l2.167641.509
ENSPLAG00000016333-8931.034ENSPLAG00000002600RAB299431.034
ENSPLAG00000016333-8844.670ENSPLAG00000015592-9642.268
ENSPLAG00000016333-8038.660ENSPLAG00000021278rab33ba7938.220
ENSPLAG00000016333-7333.742ENSPLAG00000019688si:dkey-13a21.47933.742
ENSPLAG00000016333-8948.969ENSPLAG00000018718rab22a9848.969
ENSPLAG00000016333-7230.435ENSPLAG00000009163rras8130.435
ENSPLAG00000016333-6737.086ENSPLAG00000016172-6337.086
ENSPLAG00000016333-9438.835ENSPLAG00000019707rab6bb9938.835
ENSPLAG00000016333-6938.065ENSPLAG00000007015rab9a7338.065
ENSPLAG00000016333-7439.130ENSPLAG00000006354rab157639.130
ENSPLAG00000016333-9439.024ENSPLAG00000000376rab419739.024
ENSPLAG00000016333-8938.144ENSPLAG00000020989rab35b9638.144
ENSPLAG00000016333-8843.655ENSPLAG00000018655rab1ba9641.451
ENSPLAG00000016333-8935.149ENSPLAG00000005189rab33a8835.149
ENSPLAG00000016333-10089.954ENSPLAG00000004790rab5c9989.954
ENSPLAG00000016333-8938.500ENSPLAG00000002799RAB7A9638.500
ENSPLAG00000016333-8043.407ENSPLAG00000010104rab18a8943.407
ENSPLAG00000016333-7435.542ENSPLAG00000007773si:dkey-34d22.57535.542
ENSPLAG00000016333-7442.857ENSPLAG00000014563rab4a7642.857
ENSPLAG00000016333-7446.584ENSPLAG00000014243rab11ba7446.584
ENSPLAG00000016333-7531.515ENSPLAG00000009352KRAS9030.409
ENSPLAG00000016333-7931.285ENSPLAG00000003379hrasb9431.285
ENSPLAG00000016333-7941.379ENSPLAG00000003181-8741.379
ENSPLAG00000016333-9433.014ENSPLAG00000006777-9233.014
ENSPLAG00000016333-8043.103ENSPLAG00000005869zgc:1719278143.103
ENSPLAG00000016333-9033.173ENSPLAG00000018322-9833.173
ENSPLAG00000016333-9984.332ENSPLAG00000017838rab5aa9984.332
ENSPLAG00000016333-8839.706ENSPLAG00000001598rab11bb7546.012
ENSPLAG00000016333-5430.328ENSPLAG00000004167arl8a6130.328
ENSPLAG00000016333-6938.065ENSPLAG00000022926rab9a7638.065
ENSPLAG00000016333-7442.857ENSPLAG00000005832RAB138642.857
ENSPLAG00000016333-8935.149ENSPLAG00000023128RAB159635.149
ENSPLAG00000016333-9032.212ENSPLAG00000007237RAB39B9832.212
ENSPLAG00000016333-8837.864ENSPLAG00000023374rab2a7941.071
ENSPLAG00000016333-9039.604ENSPLAG00000019570rab6a8043.713
ENSPLAG00000016333-7737.500ENSPLAG00000013594rab126938.690
ENSPLAG00000016333-7638.012ENSPLAG00000020627zgc:1015597338.012
ENSPLAG00000016333-8940.299ENSPLAG00000011175rab11a9340.299
ENSPLAG00000016333-9337.615ENSPLAG00000022515-9937.615
ENSPLAG00000016333-7138.710ENSPLAG00000015685rabl26938.710
ENSPLAG00000016333-9832.579ENSPLAG00000011866rab9b9632.579
ENSPLAG00000016333-8942.233ENSPLAG00000019136rab18b9442.079
ENSPLAG00000016333-7546.012ENSPLAG00000014207-7546.012
ENSPLAG00000016333-8943.367ENSPLAG00000006520rab1ab9643.367
ENSPLAG00000016333-5530.645ENSPLAG00000007941-6330.645
ENSPLAG00000016333-7232.298ENSPLAG00000022991rab34a5732.298
ENSPLAG00000016333-9440.000ENSPLAG00000022260rab6ba9940.000
ENSPLAG00000016333-7844.828ENSPLAG00000008004rab25b8244.828
ENSPLAG00000016333-7031.818ENSPLAG00000001529rheb8431.818
ENSPLAG00000016333-8943.500ENSPLAG00000003558rab25a9343.500
ENSPLAG00000016333-7437.195ENSPLAG00000005628rab42a7537.195
ENSPLAG00000016333-8948.969ENSPLAG00000017232rab22a9848.969
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000016333-9989.862ENSG00000108774RAB5C10094.565Homo_sapiens
ENSPLAG00000016333-10090.367ENSAPOG00000016864rab5c9990.367Acanthochromis_polyacanthus
ENSPLAG00000016333-9989.862ENSAMEG00000006003RAB5C9989.862Ailuropoda_melanoleuca
ENSPLAG00000016333-10089.954ENSACIG00000010896rab5c9989.954Amphilophus_citrinellus
ENSPLAG00000016333-10090.411ENSAOCG00000016614rab5c9990.411Amphiprion_ocellaris
ENSPLAG00000016333-9989.352ENSAPEG00000017868-9989.352Amphiprion_percula
ENSPLAG00000016333-10090.367ENSATEG00000001937rab5c9990.367Anabas_testudineus
ENSPLAG00000016333-9491.262ENSANAG00000025390RAB5C10091.262Aotus_nancymaae
ENSPLAG00000016333-9792.958ENSACLG00000008615-9992.760Astatotilapia_calliptera
ENSPLAG00000016333-10088.584ENSACLG00000002706rab5c9988.584Astatotilapia_calliptera
ENSPLAG00000016333-9588.571ENSAMXG00000037267-9988.571Astyanax_mexicanus
ENSPLAG00000016333-10090.909ENSAMXG00000043717rab5c9990.909Astyanax_mexicanus
ENSPLAG00000016333-9989.862ENSBTAG00000006982RAB5C9989.862Bos_taurus
ENSPLAG00000016333-9974.074WBGene00004268rab-59974.074Caenorhabditis_elegans
ENSPLAG00000016333-9989.862ENSCAFG00000015629RAB5C9989.862Canis_familiaris
ENSPLAG00000016333-9989.862ENSCAFG00020013537RAB5C9989.862Canis_lupus_dingo
ENSPLAG00000016333-9989.862ENSCHIG00000012960RAB5C9989.862Capra_hircus
ENSPLAG00000016333-9990.323ENSTSYG00000030531RAB5C9990.323Carlito_syrichta
ENSPLAG00000016333-9989.862ENSCCAG00000025940RAB5C9989.862Cebus_capucinus
ENSPLAG00000016333-9989.862ENSCATG00000040873RAB5C9989.862Cercocebus_atys
ENSPLAG00000016333-9989.401ENSCLAG00000016650RAB5C9989.401Chinchilla_lanigera
ENSPLAG00000016333-8293.855ENSCHOG00000009886RAB5C10093.855Choloepus_hoffmanni
ENSPLAG00000016333-9974.545ENSCING00000003340-9775.117Ciona_intestinalis
ENSPLAG00000016333-9973.128ENSCSAVG00000000613-9980.982Ciona_savignyi
ENSPLAG00000016333-9989.862ENSCGRG00001014226Rab5c9989.862Cricetulus_griseus_chok1gshd
ENSPLAG00000016333-9989.862ENSCGRG00000007534Rab5c9989.862Cricetulus_griseus_crigri
ENSPLAG00000016333-10090.411ENSCSEG00000017024rab5c9990.411Cynoglossus_semilaevis
ENSPLAG00000016333-10091.324ENSCVAG00000009550rab5c9991.324Cyprinodon_variegatus
ENSPLAG00000016333-9989.862ENSDNOG00000038853RAB5C9989.862Dasypus_novemcinctus
ENSPLAG00000016333-9990.323ENSDORG00000006819Rab5c9990.323Dipodomys_ordii
ENSPLAG00000016333-9673.460FBgn0014010Rab59473.460Drosophila_melanogaster
ENSPLAG00000016333-9678.095ENSEBUG00000014794rab5c9878.095Eptatretus_burgeri
ENSPLAG00000016333-9989.862ENSEASG00005009281RAB5C9989.862Equus_asinus_asinus
ENSPLAG00000016333-9990.323ENSECAG00000025054RAB5C9990.323Equus_caballus
ENSPLAG00000016333-9989.862ENSEEUG00000002790RAB5C9989.862Erinaceus_europaeus
ENSPLAG00000016333-9989.401ENSELUG00000018516rab5c9989.401Esox_lucius
ENSPLAG00000016333-10086.758ENSELUG00000010439-9986.758Esox_lucius
ENSPLAG00000016333-9989.862ENSFCAG00000002148RAB5C9989.862Felis_catus
ENSPLAG00000016333-9988.940ENSFDAG00000021541RAB5C9988.940Fukomys_damarensis
ENSPLAG00000016333-10089.954ENSFHEG00000012117rab5c9989.954Fundulus_heteroclitus
ENSPLAG00000016333-10094.977ENSFHEG00000015268-9994.977Fundulus_heteroclitus
ENSPLAG00000016333-7888.166ENSGMOG00000001876-9888.166Gadus_morhua
ENSPLAG00000016333-10089.954ENSGMOG00000015096rab5c9989.954Gadus_morhua
ENSPLAG00000016333-10096.413ENSGAFG00000003642-10096.413Gambusia_affinis
ENSPLAG00000016333-10089.954ENSGAFG00000000884rab5c9989.954Gambusia_affinis
ENSPLAG00000016333-10086.364ENSGACG00000008659rab5c9986.364Gasterosteus_aculeatus
ENSPLAG00000016333-9989.862ENSGGOG00000005472RAB5C9989.862Gorilla_gorilla
ENSPLAG00000016333-10088.584ENSHBUG00000002014rab5c9988.584Haplochromis_burtoni
ENSPLAG00000016333-9792.958ENSHBUG00000006823-9992.760Haplochromis_burtoni
ENSPLAG00000016333-9988.479ENSHGLG00000012067RAB5C9988.479Heterocephalus_glaber_female
ENSPLAG00000016333-10091.364ENSHCOG00000004662rab5c9891.364Hippocampus_comes
ENSPLAG00000016333-9684.434ENSHCOG00000020238-9984.793Hippocampus_comes
ENSPLAG00000016333-9787.264ENSIPUG00000020082rab5c9988.688Ictalurus_punctatus
ENSPLAG00000016333-9989.862ENSSTOG00000006620RAB5C9989.862Ictidomys_tridecemlineatus
ENSPLAG00000016333-9990.323ENSJJAG00000021181Rab5c9990.323Jaculus_jaculus
ENSPLAG00000016333-10089.954ENSKMAG00000020038rab5c9989.954Kryptolebias_marmoratus
ENSPLAG00000016333-10094.521ENSKMAG00000017417-9994.521Kryptolebias_marmoratus
ENSPLAG00000016333-10090.868ENSLBEG00000004128rab5c9990.868Labrus_bergylta
ENSPLAG00000016333-9994.470ENSLBEG00000010408-9994.470Labrus_bergylta
ENSPLAG00000016333-9988.889ENSLOCG00000012566rab5c10088.889Lepisosteus_oculatus
ENSPLAG00000016333-9989.862ENSMFAG00000039627RAB5C9989.862Macaca_fascicularis
ENSPLAG00000016333-9989.862ENSMNEG00000000355RAB5C9989.862Macaca_nemestrina
ENSPLAG00000016333-10089.498ENSMAMG00000022322rab5c9989.498Mastacembelus_armatus
ENSPLAG00000016333-10091.781ENSMAMG00000016207-9991.781Mastacembelus_armatus
ENSPLAG00000016333-9792.958ENSMZEG00005021090-9992.760Maylandia_zebra
ENSPLAG00000016333-10088.584ENSMZEG00005022735rab5c9988.584Maylandia_zebra
ENSPLAG00000016333-9990.323ENSMAUG00000015005Rab5c9990.323Mesocricetus_auratus
ENSPLAG00000016333-9990.323ENSMICG00000041608RAB5C9990.323Microcebus_murinus
ENSPLAG00000016333-9990.323ENSMOCG00000018531-9990.323Microtus_ochrogaster
ENSPLAG00000016333-10089.545ENSMMOG00000020621rab5c9989.545Mola_mola
ENSPLAG00000016333-10081.614ENSMALG00000006052rab5c9982.063Monopterus_albus
ENSPLAG00000016333-10090.868ENSMALG00000022348-9990.868Monopterus_albus
ENSPLAG00000016333-9990.783MGP_CAROLIEiJ_G0017184Rab5c9990.783Mus_caroli
ENSPLAG00000016333-9990.783ENSMUSG00000019173Rab5c9990.783Mus_musculus
ENSPLAG00000016333-9990.783MGP_PahariEiJ_G0018314Rab5c9990.783Mus_pahari
ENSPLAG00000016333-9990.783MGP_SPRETEiJ_G0018027Rab5c9990.783Mus_spretus
ENSPLAG00000016333-9989.862ENSMPUG00000010554RAB5C9989.862Mustela_putorius_furo
ENSPLAG00000016333-9989.862ENSNGAG00000010286Rab5c9989.862Nannospalax_galili
ENSPLAG00000016333-9792.958ENSNBRG00000016922-9992.760Neolamprologus_brichardi
ENSPLAG00000016333-10089.498ENSNBRG00000018165rab5c9989.498Neolamprologus_brichardi
ENSPLAG00000016333-8287.709ENSOPRG00000008255RAB5C10087.709Ochotona_princeps
ENSPLAG00000016333-9988.940ENSODEG00000017920RAB5C9988.940Octodon_degus
ENSPLAG00000016333-10089.954ENSONIG00000001113rab5c9989.954Oreochromis_niloticus
ENSPLAG00000016333-10088.991ENSORLG00000003882rab5c9988.991Oryzias_latipes
ENSPLAG00000016333-10088.991ENSORLG00020008388rab5c9988.991Oryzias_latipes_hni
ENSPLAG00000016333-10088.991ENSORLG00015021900rab5c9988.991Oryzias_latipes_hsok
ENSPLAG00000016333-10088.991ENSOMEG00000023078rab5c9988.991Oryzias_melastigma
ENSPLAG00000016333-9990.323ENSOGAG00000009456RAB5C9990.323Otolemur_garnettii
ENSPLAG00000016333-9989.862ENSOARG00000018768RAB5C9989.862Ovis_aries
ENSPLAG00000016333-9989.862ENSPPAG00000037206RAB5C9989.862Pan_paniscus
ENSPLAG00000016333-9989.862ENSPPRG00000005745RAB5C9989.862Panthera_pardus
ENSPLAG00000016333-9989.862ENSPTIG00000008177RAB5C9989.862Panthera_tigris_altaica
ENSPLAG00000016333-9989.862ENSPTRG00000009194RAB5C9989.862Pan_troglodytes
ENSPLAG00000016333-9985.714ENSPKIG00000020112-9985.714Paramormyrops_kingsleyae
ENSPLAG00000016333-9986.636ENSPKIG00000001237-9986.636Paramormyrops_kingsleyae
ENSPLAG00000016333-9789.671ENSPMGG00000010792rab5c9889.671Periophthalmus_magnuspinnatus
ENSPLAG00000016333-9990.323ENSPEMG00000017971Rab5c9990.323Peromyscus_maniculatus_bairdii
ENSPLAG00000016333-9976.682ENSPMAG00000000008rab5c10076.682Petromyzon_marinus
ENSPLAG00000016333-9976.037ENSPMAG00000001399rab5c10076.037Petromyzon_marinus
ENSPLAG00000016333-9976.279ENSPMAG00000007867rab5c9976.279Petromyzon_marinus
ENSPLAG00000016333-9988.479ENSPCIG00000020225-9988.479Phascolarctos_cinereus
ENSPLAG00000016333-10089.954ENSPMEG00000011336rab5c9989.954Poecilia_mexicana
ENSPLAG00000016333-10099.103ENSPMEG00000012614-10099.103Poecilia_mexicana
ENSPLAG00000016333-10089.954ENSPREG00000010146rab5c9989.954Poecilia_reticulata
ENSPLAG00000016333-8796.296ENSPREG00000022167-9196.791Poecilia_reticulata
ENSPLAG00000016333-9989.862ENSPPYG00000008398RAB5C9989.862Pongo_abelii
ENSPLAG00000016333-9988.940ENSPCAG00000016412RAB5C9988.940Procavia_capensis
ENSPLAG00000016333-9989.862ENSPCOG00000026327RAB5C9989.862Propithecus_coquereli
ENSPLAG00000016333-9990.323ENSPVAG00000003867RAB5C9990.323Pteropus_vampyrus
ENSPLAG00000016333-9792.958ENSPNYG00000015851-9992.760Pundamilia_nyererei
ENSPLAG00000016333-10088.584ENSPNYG00000010615rab5c9988.584Pundamilia_nyererei
ENSPLAG00000016333-9788.152ENSPNAG00000002218-9988.152Pygocentrus_nattereri
ENSPLAG00000016333-10090.455ENSPNAG00000028138rab5c9990.455Pygocentrus_nattereri
ENSPLAG00000016333-9990.323ENSRNOG00000018568Rab5c9990.323Rattus_norvegicus
ENSPLAG00000016333-9989.862ENSRBIG00000031376RAB5C9989.862Rhinopithecus_bieti
ENSPLAG00000016333-9989.862ENSRROG00000032895RAB5C9989.862Rhinopithecus_roxellana
ENSPLAG00000016333-9989.862ENSSBOG00000032552-9989.862Saimiri_boliviensis_boliviensis
ENSPLAG00000016333-9988.940ENSSHAG00000005267-9988.940Sarcophilus_harrisii
ENSPLAG00000016333-10084.545ENSSFOG00015009988-9984.545Scleropages_formosus
ENSPLAG00000016333-9690.909ENSSMAG00000007323rab5c9989.041Scophthalmus_maximus
ENSPLAG00000016333-10089.954ENSSDUG00000023008rab5c9989.954Seriola_dumerili
ENSPLAG00000016333-10089.041ENSSLDG00000017771rab5c9989.041Seriola_lalandi_dorsalis
ENSPLAG00000016333-9988.940ENSSPUG00000012950-9988.940Sphenodon_punctatus
ENSPLAG00000016333-10090.411ENSSPAG00000006436rab5c9990.411Stegastes_partitus
ENSPLAG00000016333-9989.862ENSSSCG00000032467RAB5C9989.862Sus_scrofa
ENSPLAG00000016333-10089.041ENSTRUG00000015590rab5c9989.041Takifugu_rubripes
ENSPLAG00000016333-9988.018ENSTNIG00000011711rab5c9888.018Tetraodon_nigroviridis
ENSPLAG00000016333-9989.862ENSTBEG00000007092RAB5C9989.862Tupaia_belangeri
ENSPLAG00000016333-9989.401ENSTTRG00000006673RAB5C9989.401Tursiops_truncatus
ENSPLAG00000016333-9989.862ENSUAMG00000024343RAB5C9989.862Ursus_americanus
ENSPLAG00000016333-9989.862ENSUMAG00000023270RAB5C9989.862Ursus_maritimus
ENSPLAG00000016333-10090.411ENSXCOG00000016788rab5c9990.411Xiphophorus_couchianus
ENSPLAG00000016333-10097.758ENSXCOG00000006300-10097.758Xiphophorus_couchianus
ENSPLAG00000016333-10089.954ENSXMAG00000003266rab5c9989.954Xiphophorus_maculatus
ENSPLAG00000016333-10098.624ENSXMAG00000022179-10098.624Xiphophorus_maculatus

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