EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000016537 (Gene tree)
Gene ID: 106935471
Gene Symbol: oscp1a
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 396 bases
Position: chrKQ547279.1:150019-150414
Accession: 106935471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000013093	LSM	PF01423.22	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000020999	-	396	XM_015015952	ENSPLAP00000013093	131 (aa)	XP_014871438	UPI000443F319

Gene Model

Click here to download ENSPLAG00000016537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000016537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000016537	oscp1a	53	32.877	ENSPLAG00000017165	si:ch73-14h10.2	77	32.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000016537	oscp1a	85	66.071	ENSG00000181817	LSM10	91	66.071	Homo_sapiens
ENSPLAG00000016537	oscp1a	85	67.857	ENSAMEG00000019854	LSM10	91	67.857	Ailuropoda_melanoleuca
ENSPLAG00000016537	oscp1a	89	71.795	ENSACIG00000015420	oscp1a	77	71.795	Amphilophus_citrinellus
ENSPLAG00000016537	oscp1a	90	77.119	ENSAOCG00000014654	-	98	77.119	Amphiprion_ocellaris
ENSPLAG00000016537	oscp1a	84	76.364	ENSAOCG00000015607	LSM10	85	76.364	Amphiprion_ocellaris
ENSPLAG00000016537	oscp1a	90	77.119	ENSAOCG00000015618	LSM10	98	77.119	Amphiprion_ocellaris
ENSPLAG00000016537	oscp1a	84	76.364	ENSAPEG00000021851	LSM10	85	76.364	Amphiprion_percula
ENSPLAG00000016537	oscp1a	90	77.119	ENSAPEG00000021845	-	98	77.119	Amphiprion_percula
ENSPLAG00000016537	oscp1a	85	74.107	ENSATEG00000006310	oscp1a	83	74.107	Anabas_testudineus
ENSPLAG00000016537	oscp1a	89	59.829	ENSACAG00000001231	LSM10	95	59.829	Anolis_carolinensis
ENSPLAG00000016537	oscp1a	89	64.407	ENSANAG00000018759	-	96	64.407	Aotus_nancymaae
ENSPLAG00000016537	oscp1a	85	64.286	ENSANAG00000031489	-	92	64.286	Aotus_nancymaae
ENSPLAG00000016537	oscp1a	89	69.231	ENSACLG00000004728	oscp1a	95	69.231	Astatotilapia_calliptera
ENSPLAG00000016537	oscp1a	92	69.167	ENSAMXG00000025301	oscp1a	99	69.167	Astyanax_mexicanus
ENSPLAG00000016537	oscp1a	89	63.793	ENSBTAG00000024096	LSM10	95	63.793	Bos_taurus
ENSPLAG00000016537	oscp1a	89	65.254	ENSCJAG00000044880	LSM10	96	65.254	Callithrix_jacchus
ENSPLAG00000016537	oscp1a	85	68.750	ENSCAFG00000003382	LSM10	91	68.750	Canis_familiaris
ENSPLAG00000016537	oscp1a	85	68.750	ENSCAFG00020008920	LSM10	91	68.750	Canis_lupus_dingo
ENSPLAG00000016537	oscp1a	89	63.793	ENSCHIG00000009398	LSM10	95	63.793	Capra_hircus
ENSPLAG00000016537	oscp1a	85	66.964	ENSCAPG00000012567	LSM10	91	66.964	Cavia_aperea
ENSPLAG00000016537	oscp1a	85	66.964	ENSCPOG00000039302	LSM10	91	66.964	Cavia_porcellus
ENSPLAG00000016537	oscp1a	89	64.407	ENSCCAG00000018913	-	96	64.407	Cebus_capucinus
ENSPLAG00000016537	oscp1a	85	63.393	ENSCCAG00000008378	-	91	63.393	Cebus_capucinus
ENSPLAG00000016537	oscp1a	89	64.407	ENSCATG00000006589	LSM10	96	64.407	Cercocebus_atys
ENSPLAG00000016537	oscp1a	85	66.964	ENSCLAG00000008633	LSM10	91	66.964	Chinchilla_lanigera
ENSPLAG00000016537	oscp1a	89	64.407	ENSCSAG00000000134	LSM10	96	64.407	Chlorocebus_sabaeus
ENSPLAG00000016537	oscp1a	85	64.035	ENSCHOG00000008615	LSM10	91	64.035	Choloepus_hoffmanni
ENSPLAG00000016537	oscp1a	77	32.673	ENSCSAVG00000001896	-	86	32.673	Ciona_savignyi
ENSPLAG00000016537	oscp1a	89	64.407	ENSCANG00000019928	LSM10	96	64.407	Colobus_angolensis_palliatus
ENSPLAG00000016537	oscp1a	85	67.857	ENSCGRG00001004317	-	92	67.857	Cricetulus_griseus_chok1gshd
ENSPLAG00000016537	oscp1a	85	61.062	ENSCGRG00001022673	-	91	61.062	Cricetulus_griseus_chok1gshd
ENSPLAG00000016537	oscp1a	85	67.857	ENSCGRG00000014935	-	92	67.857	Cricetulus_griseus_crigri
ENSPLAG00000016537	oscp1a	85	61.062	ENSCGRG00000015514	-	91	61.062	Cricetulus_griseus_crigri
ENSPLAG00000016537	oscp1a	89	73.276	ENSCSEG00000010374	oscp1a	79	72.650	Cynoglossus_semilaevis
ENSPLAG00000016537	oscp1a	97	68.504	ENSCVAG00000001536	oscp1a	96	68.504	Cyprinodon_variegatus
ENSPLAG00000016537	oscp1a	64	70.238	ENSDARG00000109563	CABZ01074453.1	98	70.238	Danio_rerio
ENSPLAG00000016537	oscp1a	90	67.797	ENSDARG00000101222	oscp1a	98	67.797	Danio_rerio
ENSPLAG00000016537	oscp1a	85	67.857	ENSDNOG00000036662	LSM10	91	67.857	Dasypus_novemcinctus
ENSPLAG00000016537	oscp1a	85	66.964	ENSDORG00000007579	Lsm10	91	66.964	Dipodomys_ordii
ENSPLAG00000016537	oscp1a	86	65.487	ENSETEG00000005703	LSM10	92	65.487	Echinops_telfairi
ENSPLAG00000016537	oscp1a	85	53.571	ENSEBUG00000001312	oscp1a	92	53.571	Eptatretus_burgeri
ENSPLAG00000016537	oscp1a	85	67.857	ENSEASG00005012194	LSM10	91	67.857	Equus_asinus_asinus
ENSPLAG00000016537	oscp1a	85	67.857	ENSECAG00000005071	LSM10	91	67.857	Equus_caballus
ENSPLAG00000016537	oscp1a	85	68.750	ENSEEUG00000012032	LSM10	91	68.750	Erinaceus_europaeus
ENSPLAG00000016537	oscp1a	91	71.429	ENSELUG00000007452	oscp1a	98	71.429	Esox_lucius
ENSPLAG00000016537	oscp1a	89	65.517	ENSFALG00000000851	LSM10	94	65.517	Ficedula_albicollis
ENSPLAG00000016537	oscp1a	85	66.964	ENSFDAG00000021056	LSM10	91	66.964	Fukomys_damarensis
ENSPLAG00000016537	oscp1a	86	75.439	ENSFHEG00000001058	oscp1a	98	75.439	Fundulus_heteroclitus
ENSPLAG00000016537	oscp1a	89	64.655	ENSGMOG00000019832	oscp1a	97	64.655	Gadus_morhua
ENSPLAG00000016537	oscp1a	90	66.102	ENSGALG00000002127	LSM10	96	66.102	Gallus_gallus
ENSPLAG00000016537	oscp1a	82	88.785	ENSGAFG00000016445	oscp1a	87	88.785	Gambusia_affinis
ENSPLAG00000016537	oscp1a	93	71.311	ENSGACG00000002329	oscp1a	100	71.311	Gasterosteus_aculeatus
ENSPLAG00000016537	oscp1a	89	64.655	ENSGAGG00000024848	LSM10	94	64.655	Gopherus_agassizii
ENSPLAG00000016537	oscp1a	89	64.407	ENSGGOG00000003556	LSM10	96	64.407	Gorilla_gorilla
ENSPLAG00000016537	oscp1a	89	70.085	ENSHBUG00000001722	oscp1a	95	70.085	Haplochromis_burtoni
ENSPLAG00000016537	oscp1a	85	65.179	ENSHGLG00000011625	LSM10	91	65.179	Heterocephalus_glaber_female
ENSPLAG00000016537	oscp1a	85	65.179	ENSHGLG00100001769	LSM10	91	65.179	Heterocephalus_glaber_male
ENSPLAG00000016537	oscp1a	82	71.028	ENSIPUG00000005808	oscp1a	93	71.028	Ictalurus_punctatus
ENSPLAG00000016537	oscp1a	85	67.857	ENSSTOG00000000606	LSM10	91	67.857	Ictidomys_tridecemlineatus
ENSPLAG00000016537	oscp1a	92	75.000	ENSKMAG00000012143	oscp1a	99	75.000	Kryptolebias_marmoratus
ENSPLAG00000016537	oscp1a	87	69.298	ENSLBEG00000017764	oscp1a	93	69.298	Labrus_bergylta
ENSPLAG00000016537	oscp1a	85	60.714	ENSLACG00000015904	LSM10	86	60.714	Latimeria_chalumnae
ENSPLAG00000016537	oscp1a	89	66.667	ENSLOCG00000018277	oscp1a	96	66.667	Lepisosteus_oculatus
ENSPLAG00000016537	oscp1a	89	65.254	ENSLAFG00000009600	LSM10	96	65.254	Loxodonta_africana
ENSPLAG00000016537	oscp1a	89	64.407	ENSMFAG00000009115	LSM10	96	64.407	Macaca_fascicularis
ENSPLAG00000016537	oscp1a	89	64.407	ENSMMUG00000017338	LSM10	96	64.407	Macaca_mulatta
ENSPLAG00000016537	oscp1a	89	64.407	ENSMNEG00000020023	LSM10	96	64.407	Macaca_nemestrina
ENSPLAG00000016537	oscp1a	89	64.407	ENSMLEG00000025150	LSM10	96	64.407	Mandrillus_leucophaeus
ENSPLAG00000016537	oscp1a	89	72.650	ENSMAMG00000004427	oscp1a	96	72.650	Mastacembelus_armatus
ENSPLAG00000016537	oscp1a	89	69.231	ENSMZEG00005026307	oscp1a	95	69.231	Maylandia_zebra
ENSPLAG00000016537	oscp1a	90	65.254	ENSMGAG00000015707	LSM10	96	65.254	Meleagris_gallopavo
ENSPLAG00000016537	oscp1a	85	68.750	ENSMAUG00000016624	Lsm10	92	68.750	Mesocricetus_auratus
ENSPLAG00000016537	oscp1a	85	68.750	ENSMOCG00000021943	Lsm10	92	68.750	Microtus_ochrogaster
ENSPLAG00000016537	oscp1a	89	74.359	ENSMMOG00000013597	oscp1a	87	74.359	Mola_mola
ENSPLAG00000016537	oscp1a	89	68.103	ENSMODG00000023328	LSM10	94	68.103	Monodelphis_domestica
ENSPLAG00000016537	oscp1a	54	71.831	ENSMALG00000012661	oscp1a	55	71.831	Monopterus_albus
ENSPLAG00000016537	oscp1a	85	67.857	MGP_CAROLIEiJ_G0026467	Lsm10	95	69.318	Mus_caroli
ENSPLAG00000016537	oscp1a	85	67.857	ENSMUSG00000050188	Lsm10	95	69.318	Mus_musculus
ENSPLAG00000016537	oscp1a	85	67.857	MGP_PahariEiJ_G0028798	Lsm10	95	69.318	Mus_pahari
ENSPLAG00000016537	oscp1a	85	67.857	MGP_SPRETEiJ_G0027446	Lsm10	95	69.318	Mus_spretus
ENSPLAG00000016537	oscp1a	85	68.750	ENSMPUG00000018593	LSM10	91	68.750	Mustela_putorius_furo
ENSPLAG00000016537	oscp1a	85	67.857	ENSMLUG00000023895	LSM10	91	67.857	Myotis_lucifugus
ENSPLAG00000016537	oscp1a	85	66.071	ENSNGAG00000015011	Lsm10	91	66.071	Nannospalax_galili
ENSPLAG00000016537	oscp1a	94	67.480	ENSNBRG00000014306	oscp1a	100	67.480	Neolamprologus_brichardi
ENSPLAG00000016537	oscp1a	89	64.407	ENSNLEG00000033754	LSM10	96	64.407	Nomascus_leucogenys
ENSPLAG00000016537	oscp1a	89	68.103	ENSMEUG00000006313	LSM10	94	68.103	Notamacropus_eugenii
ENSPLAG00000016537	oscp1a	85	67.857	ENSOPRG00000001699	LSM10	91	67.857	Ochotona_princeps
ENSPLAG00000016537	oscp1a	85	66.964	ENSODEG00000019161	LSM10	91	66.964	Octodon_degus
ENSPLAG00000016537	oscp1a	92	68.595	ENSONIG00000020904	oscp1a	99	68.595	Oreochromis_niloticus
ENSPLAG00000016537	oscp1a	86	68.142	ENSOANG00000002066	LSM10	92	68.142	Ornithorhynchus_anatinus
ENSPLAG00000016537	oscp1a	85	66.964	ENSOCUG00000005333	LSM10	91	66.964	Oryctolagus_cuniculus
ENSPLAG00000016537	oscp1a	85	77.679	ENSORLG00000009504	oscp1a	93	77.679	Oryzias_latipes
ENSPLAG00000016537	oscp1a	85	77.679	ENSORLG00020016201	oscp1a	93	77.679	Oryzias_latipes_hni
ENSPLAG00000016537	oscp1a	85	76.786	ENSORLG00015007794	oscp1a	92	76.786	Oryzias_latipes_hsok
ENSPLAG00000016537	oscp1a	85	67.857	ENSOGAG00000002653	LSM10	91	67.857	Otolemur_garnettii
ENSPLAG00000016537	oscp1a	89	63.793	ENSOARG00000009596	LSM10	95	63.793	Ovis_aries
ENSPLAG00000016537	oscp1a	85	66.071	ENSPPAG00000023465	LSM10	91	66.071	Pan_paniscus
ENSPLAG00000016537	oscp1a	85	67.857	ENSPPRG00000014619	LSM10	91	67.857	Panthera_pardus
ENSPLAG00000016537	oscp1a	85	67.857	ENSPTIG00000004613	LSM10	91	67.857	Panthera_tigris_altaica
ENSPLAG00000016537	oscp1a	85	66.071	ENSPTRG00000000539	LSM10	91	66.071	Pan_troglodytes
ENSPLAG00000016537	oscp1a	89	64.407	ENSPANG00000023172	LSM10	96	64.407	Papio_anubis
ENSPLAG00000016537	oscp1a	92	68.333	ENSPKIG00000003728	oscp1a	97	68.333	Paramormyrops_kingsleyae
ENSPLAG00000016537	oscp1a	89	63.793	ENSPSIG00000000590	LSM10	94	63.793	Pelodiscus_sinensis
ENSPLAG00000016537	oscp1a	59	72.727	ENSPMGG00000015718	oscp1a	100	72.727	Periophthalmus_magnuspinnatus
ENSPLAG00000016537	oscp1a	78	66.667	ENSPCIG00000014865	LSM10	75	66.667	Phascolarctos_cinereus
ENSPLAG00000016537	oscp1a	90	100.000	ENSPFOG00000020490	oscp1a	100	100.000	Poecilia_formosa
ENSPLAG00000016537	oscp1a	86	97.345	ENSPMEG00000000174	oscp1a	98	97.345	Poecilia_mexicana
ENSPLAG00000016537	oscp1a	100	96.183	ENSPREG00000009899	oscp1a	100	96.183	Poecilia_reticulata
ENSPLAG00000016537	oscp1a	89	64.407	ENSPPYG00000001539	LSM10	96	64.407	Pongo_abelii
ENSPLAG00000016537	oscp1a	89	64.957	ENSPCAG00000002520	LSM10	96	64.957	Procavia_capensis
ENSPLAG00000016537	oscp1a	85	66.964	ENSPVAG00000008644	LSM10	91	66.964	Pteropus_vampyrus
ENSPLAG00000016537	oscp1a	89	70.085	ENSPNYG00000003138	oscp1a	95	70.085	Pundamilia_nyererei
ENSPLAG00000016537	oscp1a	89	69.231	ENSPNAG00000028829	oscp1a	97	69.231	Pygocentrus_nattereri
ENSPLAG00000016537	oscp1a	85	66.964	ENSRNOG00000025716	Lsm10	92	66.964	Rattus_norvegicus
ENSPLAG00000016537	oscp1a	89	64.407	ENSRBIG00000001561	LSM10	96	64.407	Rhinopithecus_bieti
ENSPLAG00000016537	oscp1a	89	64.407	ENSRROG00000011414	LSM10	96	64.407	Rhinopithecus_roxellana
ENSPLAG00000016537	oscp1a	89	64.407	ENSSBOG00000036413	-	96	64.407	Saimiri_boliviensis_boliviensis
ENSPLAG00000016537	oscp1a	89	68.103	ENSSHAG00000018056	LSM10	94	68.103	Sarcophilus_harrisii
ENSPLAG00000016537	oscp1a	91	72.269	ENSSFOG00015019954	lsm10	98	72.269	Scleropages_formosus
ENSPLAG00000016537	oscp1a	89	73.504	ENSSMAG00000001297	oscp1a	100	73.504	Scophthalmus_maximus
ENSPLAG00000016537	oscp1a	89	66.667	ENSSDUG00000007090	oscp1a	95	66.667	Seriola_dumerili
ENSPLAG00000016537	oscp1a	89	67.521	ENSSLDG00000000800	oscp1a	97	67.521	Seriola_lalandi_dorsalis
ENSPLAG00000016537	oscp1a	80	66.667	ENSSARG00000004211	LSM10	91	66.667	Sorex_araneus
ENSPLAG00000016537	oscp1a	92	73.333	ENSSPAG00000009229	oscp1a	99	73.333	Stegastes_partitus
ENSPLAG00000016537	oscp1a	89	65.254	ENSSSCG00000038916	LSM10	96	65.254	Sus_scrofa
ENSPLAG00000016537	oscp1a	89	65.517	ENSTGUG00000001600	-	95	65.517	Taeniopygia_guttata
ENSPLAG00000016537	oscp1a	89	66.379	ENSTGUG00000001602	-	95	66.379	Taeniopygia_guttata
ENSPLAG00000016537	oscp1a	90	71.186	ENSTRUG00000010531	oscp1a	95	71.186	Takifugu_rubripes
ENSPLAG00000016537	oscp1a	85	67.857	ENSTBEG00000016674	LSM10	91	67.857	Tupaia_belangeri
ENSPLAG00000016537	oscp1a	85	68.750	ENSUAMG00000020265	LSM10	91	68.750	Ursus_americanus
ENSPLAG00000016537	oscp1a	91	66.116	ENSUMAG00000001438	LSM10	56	66.116	Ursus_maritimus
ENSPLAG00000016537	oscp1a	85	68.750	ENSVVUG00000023209	LSM10	91	68.750	Vulpes_vulpes
ENSPLAG00000016537	oscp1a	90	60.169	ENSXETG00000027631	lsm10	96	60.169	Xenopus_tropicalis
ENSPLAG00000016537	oscp1a	96	93.651	ENSXCOG00000018776	oscp1a	79	93.651	Xiphophorus_couchianus
ENSPLAG00000016537	oscp1a	85	91.964	ENSXMAG00000019963	oscp1a	90	91.964	Xiphophorus_maculatus