EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000016626 (Gene tree)
Gene ID: 106950858
Gene Symbol: prdm12b
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 3322 bases
Position: chrKQ545740.1:252978-256299
Accession: 106950858
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000013159	zf-C2H2	PF00096.26	8.4e-13	1	2
ENSPLAP00000013159	zf-C2H2	PF00096.26	8.4e-13	2	2
ENSPLAP00000013159	zf-met	PF12874.7	8.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000021086	-	1137	XM_015037994	ENSPLAP00000013159	378 (aa)	XP_014893480	-

Gene Model

Click here to download ENSPLAG00000016626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000016626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000016626	prdm12b	66	41.176	ENSPLAG00000014148	prdm5	91	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000016626	prdm12b	90	82.891	ENSG00000130711	PRDM12	90	83.036	Homo_sapiens
ENSPLAG00000016626	prdm12b	99	87.724	ENSAPOG00000016051	prdm12b	100	87.212	Acanthochromis_polyacanthus
ENSPLAG00000016626	prdm12b	99	64.583	ENSAPOG00000018234	-	100	64.583	Acanthochromis_polyacanthus
ENSPLAG00000016626	prdm12b	87	82.424	ENSAMEG00000016234	PRDM12	99	82.727	Ailuropoda_melanoleuca
ENSPLAG00000016626	prdm12b	99	88.021	ENSACIG00000019578	prdm12b	100	87.760	Amphilophus_citrinellus
ENSPLAG00000016626	prdm12b	99	76.590	ENSACIG00000005193	-	100	76.590	Amphilophus_citrinellus
ENSPLAG00000016626	prdm12b	99	89.062	ENSAOCG00000015040	prdm12b	100	88.542	Amphiprion_ocellaris
ENSPLAG00000016626	prdm12b	99	89.764	ENSAPEG00000015092	prdm12b	100	89.764	Amphiprion_percula
ENSPLAG00000016626	prdm12b	100	73.846	ENSAPEG00000022849	-	100	74.103	Amphiprion_percula
ENSPLAG00000016626	prdm12b	99	78.093	ENSATEG00000014595	-	96	84.290	Anabas_testudineus
ENSPLAG00000016626	prdm12b	92	81.556	ENSANAG00000020616	PRDM12	97	83.333	Aotus_nancymaae
ENSPLAG00000016626	prdm12b	99	76.574	ENSACLG00000007631	-	100	75.505	Astatotilapia_calliptera
ENSPLAG00000016626	prdm12b	99	86.280	ENSACLG00000011876	prdm12b	100	84.697	Astatotilapia_calliptera
ENSPLAG00000016626	prdm12b	99	81.530	ENSAMXG00000033665	prdm12b	100	81.053	Astyanax_mexicanus
ENSPLAG00000016626	prdm12b	99	80.902	ENSAMXG00000008540	PRDM12	100	80.637	Astyanax_mexicanus
ENSPLAG00000016626	prdm12b	90	82.596	ENSBTAG00000023797	PRDM12	91	83.036	Bos_taurus
ENSPLAG00000016626	prdm12b	90	82.891	ENSCJAG00000020540	PRDM12	91	83.036	Callithrix_jacchus
ENSPLAG00000016626	prdm12b	78	83.446	ENSCAFG00000023076	PRDM12	89	83.959	Canis_familiaris
ENSPLAG00000016626	prdm12b	90	82.891	ENSCAFG00020024046	PRDM12	90	83.333	Canis_lupus_dingo
ENSPLAG00000016626	prdm12b	90	82.891	ENSCHIG00000025005	PRDM12	91	83.333	Capra_hircus
ENSPLAG00000016626	prdm12b	93	77.841	ENSCPOG00000005901	PRDM12	95	83.125	Cavia_porcellus
ENSPLAG00000016626	prdm12b	90	82.891	ENSCCAG00000037485	PRDM12	91	83.036	Cebus_capucinus
ENSPLAG00000016626	prdm12b	90	82.891	ENSCATG00000020327	PRDM12	91	83.036	Cercocebus_atys
ENSPLAG00000016626	prdm12b	89	82.738	ENSCLAG00000005499	PRDM12	90	82.738	Chinchilla_lanigera
ENSPLAG00000016626	prdm12b	90	82.891	ENSCSAG00000014756	PRDM12	90	83.036	Chlorocebus_sabaeus
ENSPLAG00000016626	prdm12b	100	78.740	ENSCPBG00000022628	PRDM12	100	77.428	Chrysemys_picta_bellii
ENSPLAG00000016626	prdm12b	90	82.596	ENSCGRG00001015005	Prdm12	90	83.036	Cricetulus_griseus_chok1gshd
ENSPLAG00000016626	prdm12b	99	78.117	ENSCVAG00000000944	-	100	77.863	Cyprinodon_variegatus
ENSPLAG00000016626	prdm12b	99	93.421	ENSCVAG00000017166	prdm12b	100	92.368	Cyprinodon_variegatus
ENSPLAG00000016626	prdm12b	99	82.275	ENSDARG00000007430	prdm12b	100	81.481	Danio_rerio
ENSPLAG00000016626	prdm12b	89	82.301	ENSDNOG00000042302	PRDM12	91	82.738	Dasypus_novemcinctus
ENSPLAG00000016626	prdm12b	83	66.567	ENSEBUG00000016780	prdm12b	74	67.560	Eptatretus_burgeri
ENSPLAG00000016626	prdm12b	93	80.453	ENSEASG00005008472	PRDM12	91	83.333	Equus_asinus_asinus
ENSPLAG00000016626	prdm12b	93	80.453	ENSECAG00000005933	PRDM12	91	83.333	Equus_caballus
ENSPLAG00000016626	prdm12b	99	80.789	ENSELUG00000009905	prdm12b	100	80.263	Esox_lucius
ENSPLAG00000016626	prdm12b	99	80.159	ENSELUG00000013674	PRDM12	100	81.088	Esox_lucius
ENSPLAG00000016626	prdm12b	90	82.891	ENSFCAG00000043086	PRDM12	91	83.333	Felis_catus
ENSPLAG00000016626	prdm12b	100	79.528	ENSFALG00000001445	PRDM12	89	78.215	Ficedula_albicollis
ENSPLAG00000016626	prdm12b	99	76.000	ENSFHEG00000007746	-	100	76.590	Fundulus_heteroclitus
ENSPLAG00000016626	prdm12b	99	93.211	ENSFHEG00000003944	prdm12b	100	92.167	Fundulus_heteroclitus
ENSPLAG00000016626	prdm12b	91	86.325	ENSGMOG00000011797	prdm12b	100	82.632	Gadus_morhua
ENSPLAG00000016626	prdm12b	100	79.528	ENSGALG00000003895	PRDM12	100	78.215	Gallus_gallus
ENSPLAG00000016626	prdm12b	100	97.619	ENSGAFG00000010827	prdm12b	100	97.619	Gambusia_affinis
ENSPLAG00000016626	prdm12b	100	88.251	ENSGACG00000016713	prdm12b	100	87.402	Gasterosteus_aculeatus
ENSPLAG00000016626	prdm12b	100	78.740	ENSGAGG00000014083	PRDM12	100	77.428	Gopherus_agassizii
ENSPLAG00000016626	prdm12b	90	82.596	ENSGGOG00000010568	PRDM12	90	82.738	Gorilla_gorilla
ENSPLAG00000016626	prdm12b	99	87.958	ENSHBUG00000022878	prdm12b	100	88.220	Haplochromis_burtoni
ENSPLAG00000016626	prdm12b	99	76.574	ENSHBUG00000022537	-	93	75.315	Haplochromis_burtoni
ENSPLAG00000016626	prdm12b	89	83.036	ENSHGLG00000013939	PRDM12	90	83.036	Heterocephalus_glaber_female
ENSPLAG00000016626	prdm12b	88	85.714	ENSHCOG00000003663	prdm12b	100	79.747	Hippocampus_comes
ENSPLAG00000016626	prdm12b	95	74.309	ENSHCOG00000021167	-	100	70.801	Hippocampus_comes
ENSPLAG00000016626	prdm12b	99	77.836	ENSIPUG00000019544	PRDM12	100	77.836	Ictalurus_punctatus
ENSPLAG00000016626	prdm12b	99	82.493	ENSIPUG00000017053	prdm12b	100	81.842	Ictalurus_punctatus
ENSPLAG00000016626	prdm12b	96	78.904	ENSSTOG00000005986	PRDM12	86	83.333	Ictidomys_tridecemlineatus
ENSPLAG00000016626	prdm12b	89	83.333	ENSJJAG00000005424	Prdm12	99	83.333	Jaculus_jaculus
ENSPLAG00000016626	prdm12b	94	77.159	ENSKMAG00000021205	-	93	77.159	Kryptolebias_marmoratus
ENSPLAG00000016626	prdm12b	99	82.921	ENSKMAG00000016921	prdm12b	100	84.653	Kryptolebias_marmoratus
ENSPLAG00000016626	prdm12b	99	78.329	ENSLBEG00000007776	-	100	78.329	Labrus_bergylta
ENSPLAG00000016626	prdm12b	99	88.743	ENSLBEG00000017769	prdm12b	100	88.158	Labrus_bergylta
ENSPLAG00000016626	prdm12b	99	78.892	ENSLACG00000017560	PRDM12	99	77.573	Latimeria_chalumnae
ENSPLAG00000016626	prdm12b	99	79.737	ENSLOCG00000005429	prdm12b	99	80.000	Lepisosteus_oculatus
ENSPLAG00000016626	prdm12b	90	83.186	ENSLAFG00000006979	PRDM12	90	83.631	Loxodonta_africana
ENSPLAG00000016626	prdm12b	90	82.596	ENSMFAG00000040322	PRDM12	90	83.036	Macaca_fascicularis
ENSPLAG00000016626	prdm12b	90	82.891	ENSMNEG00000037234	PRDM12	91	83.036	Macaca_nemestrina
ENSPLAG00000016626	prdm12b	99	87.206	ENSMAMG00000013212	prdm12b	100	86.945	Mastacembelus_armatus
ENSPLAG00000016626	prdm12b	99	74.430	ENSMAMG00000018988	-	100	74.177	Mastacembelus_armatus
ENSPLAG00000016626	prdm12b	99	76.190	ENSMZEG00005000415	PRDM12	100	74.874	Maylandia_zebra
ENSPLAG00000016626	prdm12b	96	81.319	ENSMGAG00000005438	PRDM12	92	85.970	Meleagris_gallopavo
ENSPLAG00000016626	prdm12b	100	76.984	ENSMAUG00000013040	Prdm12	90	82.891	Mesocricetus_auratus
ENSPLAG00000016626	prdm12b	90	82.891	ENSMICG00000015480	PRDM12	91	83.333	Microcebus_murinus
ENSPLAG00000016626	prdm12b	98	77.957	ENSMOCG00000021026	Prdm12	90	83.333	Microtus_ochrogaster
ENSPLAG00000016626	prdm12b	100	78.571	ENSMODG00000012108	PRDM12	92	84.940	Monodelphis_domestica
ENSPLAG00000016626	prdm12b	99	73.560	ENSMALG00000021901	prdm12b	99	72.632	Monopterus_albus
ENSPLAG00000016626	prdm12b	90	82.596	MGP_CAROLIEiJ_G0023414	Prdm12	90	83.036	Mus_caroli
ENSPLAG00000016626	prdm12b	90	82.596	ENSMUSG00000079466	Prdm12	90	83.036	Mus_musculus
ENSPLAG00000016626	prdm12b	90	82.596	MGP_PahariEiJ_G0024871	Prdm12	90	83.036	Mus_pahari
ENSPLAG00000016626	prdm12b	90	82.596	MGP_SPRETEiJ_G0024331	Prdm12	90	83.036	Mus_spretus
ENSPLAG00000016626	prdm12b	88	83.735	ENSNGAG00000018480	Prdm12	93	83.036	Nannospalax_galili
ENSPLAG00000016626	prdm12b	99	72.351	ENSNBRG00000024312	-	100	72.351	Neolamprologus_brichardi
ENSPLAG00000016626	prdm12b	99	87.273	ENSNBRG00000006727	prdm12b	100	87.273	Neolamprologus_brichardi
ENSPLAG00000016626	prdm12b	100	70.370	ENSMEUG00000003828	PRDM12	92	75.602	Notamacropus_eugenii
ENSPLAG00000016626	prdm12b	89	83.333	ENSOPRG00000008680	PRDM12	99	83.333	Ochotona_princeps
ENSPLAG00000016626	prdm12b	93	81.429	ENSODEG00000016282	PRDM12	62	83.036	Octodon_degus
ENSPLAG00000016626	prdm12b	64	75.519	ENSOANG00000001043	PRDM12	100	73.444	Ornithorhynchus_anatinus
ENSPLAG00000016626	prdm12b	81	83.660	ENSOCUG00000008241	PRDM12	96	83.660	Oryctolagus_cuniculus
ENSPLAG00000016626	prdm12b	100	85.604	ENSORLG00000007114	prdm12b	100	84.794	Oryzias_latipes
ENSPLAG00000016626	prdm12b	99	77.436	ENSORLG00000017558	-	100	77.179	Oryzias_latipes
ENSPLAG00000016626	prdm12b	100	85.052	ENSORLG00020019565	prdm12b	100	84.794	Oryzias_latipes_hni
ENSPLAG00000016626	prdm12b	99	76.982	ENSORLG00020013167	-	100	76.982	Oryzias_latipes_hni
ENSPLAG00000016626	prdm12b	100	84.021	ENSORLG00015007621	prdm12b	100	84.278	Oryzias_latipes_hsok
ENSPLAG00000016626	prdm12b	99	77.436	ENSORLG00015003435	-	100	77.179	Oryzias_latipes_hsok
ENSPLAG00000016626	prdm12b	100	84.439	ENSOMEG00000004134	prdm12b	100	84.655	Oryzias_melastigma
ENSPLAG00000016626	prdm12b	99	76.010	ENSOMEG00000007762	-	100	76.010	Oryzias_melastigma
ENSPLAG00000016626	prdm12b	90	82.891	ENSOGAG00000007557	PRDM12	99	83.333	Otolemur_garnettii
ENSPLAG00000016626	prdm12b	78	81.973	ENSPPAG00000031506	-	99	80.667	Pan_paniscus
ENSPLAG00000016626	prdm12b	98	71.968	ENSPPRG00000023024	PRDM12	84	77.151	Panthera_pardus
ENSPLAG00000016626	prdm12b	90	82.891	ENSPTRG00000043324	-	90	83.036	Pan_troglodytes
ENSPLAG00000016626	prdm12b	90	82.891	ENSPTRG00000021475	PRDM12	90	83.036	Pan_troglodytes
ENSPLAG00000016626	prdm12b	90	82.891	ENSPANG00000025967	PRDM12	91	83.036	Papio_anubis
ENSPLAG00000016626	prdm12b	93	79.143	ENSPKIG00000004305	PRDM12	94	81.928	Paramormyrops_kingsleyae
ENSPLAG00000016626	prdm12b	99	82.152	ENSPKIG00000007228	prdm12b	100	81.890	Paramormyrops_kingsleyae
ENSPLAG00000016626	prdm12b	100	78.478	ENSPSIG00000006739	PRDM12	100	77.165	Pelodiscus_sinensis
ENSPLAG00000016626	prdm12b	100	86.016	ENSPMGG00000008867	prdm12b	100	86.544	Periophthalmus_magnuspinnatus
ENSPLAG00000016626	prdm12b	99	75.064	ENSPMGG00000002356	-	100	75.128	Periophthalmus_magnuspinnatus
ENSPLAG00000016626	prdm12b	96	78.689	ENSPEMG00000009969	Prdm12	90	83.036	Peromyscus_maniculatus_bairdii
ENSPLAG00000016626	prdm12b	100	78.571	ENSPCIG00000024119	PRDM12	92	84.940	Phascolarctos_cinereus
ENSPLAG00000016626	prdm12b	99	95.026	ENSPFOG00000019841	prdm12b	100	95.026	Poecilia_formosa
ENSPLAG00000016626	prdm12b	96	99.725	ENSPMEG00000016698	prdm12b	99	99.725	Poecilia_mexicana
ENSPLAG00000016626	prdm12b	100	98.945	ENSPREG00000015073	prdm12b	100	98.945	Poecilia_reticulata
ENSPLAG00000016626	prdm12b	95	73.913	ENSPREG00000003211	-	94	73.370	Poecilia_reticulata
ENSPLAG00000016626	prdm12b	92	81.556	ENSPPYG00000019694	PRDM12	93	84.036	Pongo_abelii
ENSPLAG00000016626	prdm12b	90	82.891	ENSPCOG00000022255	PRDM12	90	83.333	Propithecus_coquereli
ENSPLAG00000016626	prdm12b	90	82.891	ENSPVAG00000001511	PRDM12	90	83.333	Pteropus_vampyrus
ENSPLAG00000016626	prdm12b	99	87.760	ENSPNYG00000009607	prdm12b	100	86.979	Pundamilia_nyererei
ENSPLAG00000016626	prdm12b	99	76.441	ENSPNYG00000013589	-	100	74.874	Pundamilia_nyererei
ENSPLAG00000016626	prdm12b	99	79.427	ENSPNAG00000013396	PRDM12	100	79.319	Pygocentrus_nattereri
ENSPLAG00000016626	prdm12b	99	82.322	ENSPNAG00000024532	prdm12b	100	81.794	Pygocentrus_nattereri
ENSPLAG00000016626	prdm12b	90	82.596	ENSRNOG00000009218	Prdm12	90	83.036	Rattus_norvegicus
ENSPLAG00000016626	prdm12b	86	83.951	ENSRBIG00000042712	PRDM12	91	81.602	Rhinopithecus_bieti
ENSPLAG00000016626	prdm12b	87	84.146	ENSRROG00000043554	PRDM12	100	84.146	Rhinopithecus_roxellana
ENSPLAG00000016626	prdm12b	100	77.836	ENSSHAG00000015972	PRDM12	92	84.084	Sarcophilus_harrisii
ENSPLAG00000016626	prdm12b	99	85.496	ENSSMAG00000003754	prdm12b	100	85.496	Scophthalmus_maximus
ENSPLAG00000016626	prdm12b	99	86.701	ENSSDUG00000023498	prdm12b	100	85.861	Seriola_dumerili
ENSPLAG00000016626	prdm12b	99	78.036	ENSSDUG00000019071	-	100	78.295	Seriola_dumerili
ENSPLAG00000016626	prdm12b	99	85.934	ENSSLDG00000009557	prdm12b	100	85.604	Seriola_lalandi_dorsalis
ENSPLAG00000016626	prdm12b	99	76.455	ENSSLDG00000013562	-	100	76.455	Seriola_lalandi_dorsalis
ENSPLAG00000016626	prdm12b	100	77.632	ENSSPUG00000013424	PRDM12	100	76.316	Sphenodon_punctatus
ENSPLAG00000016626	prdm12b	99	71.768	ENSSPAG00000022420	-	100	72.296	Stegastes_partitus
ENSPLAG00000016626	prdm12b	99	88.312	ENSSPAG00000018824	prdm12b	100	88.312	Stegastes_partitus
ENSPLAG00000016626	prdm12b	90	82.891	ENSSSCG00000005703	PRDM12	90	83.333	Sus_scrofa
ENSPLAG00000016626	prdm12b	99	75.979	ENSTRUG00000013239	-	100	75.979	Takifugu_rubripes
ENSPLAG00000016626	prdm12b	99	87.071	ENSTRUG00000018659	prdm12b	100	86.016	Takifugu_rubripes
ENSPLAG00000016626	prdm12b	99	87.335	ENSTNIG00000009020	prdm12b	99	86.016	Tetraodon_nigroviridis
ENSPLAG00000016626	prdm12b	99	74.869	ENSTNIG00000005859	-	100	74.151	Tetraodon_nigroviridis
ENSPLAG00000016626	prdm12b	90	82.891	ENSUAMG00000009653	PRDM12	91	83.333	Ursus_americanus
ENSPLAG00000016626	prdm12b	90	82.891	ENSVVUG00000027662	PRDM12	78	83.333	Vulpes_vulpes
ENSPLAG00000016626	prdm12b	100	97.354	ENSXCOG00000002836	prdm12b	100	97.354	Xiphophorus_couchianus
ENSPLAG00000016626	prdm12b	99	96.579	ENSXMAG00000005537	prdm12b	100	96.579	Xiphophorus_maculatus
ENSPLAG00000016626	prdm12b	99	75.500	ENSXMAG00000028012	-	100	75.318	Xiphophorus_maculatus