EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000016684 (Gene tree)
Gene ID: 106936078
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog A-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 7404 bases
Position: chrKQ545321.1:134488-141891
Accession: 106936078
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000027796	Nop52	PF05997.12	3.2e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000021151	-	2255	XM_015016914	ENSPLAP00000027796	694 (aa)	XP_014872400	UPI00072EA6E5

Gene Model

Click here to download ENSPLAG00000016684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000016684's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000016684	-	62	44.543	ENSAMEG00000011448	RRP1	83	46.966	Ailuropoda_melanoleuca
ENSPLAG00000016684	-	52	43.836	ENSAMEG00000011401	RRP1B	62	39.207	Ailuropoda_melanoleuca
ENSPLAG00000016684	-	55	69.110	ENSAOCG00000017894	-	84	67.866	Amphiprion_ocellaris
ENSPLAG00000016684	-	51	48.056	ENSBTAG00000003981	RRP1	78	47.778	Bos_taurus
ENSPLAG00000016684	-	53	48.404	ENSCAFG00000010646	RRP1	81	48.936	Canis_familiaris
ENSPLAG00000016684	-	52	44.236	ENSCAFG00020018901	RRP1B	50	44.173	Canis_lupus_dingo
ENSPLAG00000016684	-	53	48.404	ENSCAFG00020018979	RRP1	81	48.936	Canis_lupus_dingo
ENSPLAG00000016684	-	51	48.626	ENSCHIG00000020948	RRP1	79	48.626	Capra_hircus
ENSPLAG00000016684	-	50	44.633	ENSCPOG00000002396	RRP1B	63	40.087	Cavia_porcellus
ENSPLAG00000016684	-	52	44.837	ENSCCAG00000029384	RRP1B	55	44.837	Cebus_capucinus
ENSPLAG00000016684	-	51	53.186	ENSCPBG00000010310	RRP1B	50	50.123	Chrysemys_picta_bellii
ENSPLAG00000016684	-	50	35.227	ENSCING00000003304	-	75	35.227	Ciona_intestinalis
ENSPLAG00000016684	-	76	36.563	ENSCGRG00001010889	-	52	42.894	Cricetulus_griseus_chok1gshd
ENSPLAG00000016684	-	76	36.380	ENSCGRG00001023882	-	59	61.194	Cricetulus_griseus_chok1gshd
ENSPLAG00000016684	-	53	65.426	ENSCSEG00000020711	-	73	64.541	Cynoglossus_semilaevis
ENSPLAG00000016684	-	56	71.392	ENSCVAG00000017568	-	97	71.392	Cyprinodon_variegatus
ENSPLAG00000016684	-	50	53.736	ENSDARG00000103337	rrp1	80	42.832	Danio_rerio
ENSPLAG00000016684	-	62	43.379	ENSDNOG00000019880	RRP1	82	47.312	Dasypus_novemcinctus
ENSPLAG00000016684	-	60	56.885	ENSELUG00000015885	-	89	59.606	Esox_lucius
ENSPLAG00000016684	-	52	43.207	ENSFCAG00000010272	RRP1B	50	43.207	Felis_catus
ENSPLAG00000016684	-	50	51.149	ENSFCAG00000008434	RRP1	76	51.585	Felis_catus
ENSPLAG00000016684	-	62	43.636	ENSFDAG00000013728	RRP1	74	50.592	Fukomys_damarensis
ENSPLAG00000016684	-	89	65.225	ENSFHEG00000016314	-	77	64.130	Fundulus_heteroclitus
ENSPLAG00000016684	-	52	60.882	ENSGMOG00000001953	-	55	59.893	Gadus_morhua
ENSPLAG00000016684	-	54	51.053	ENSGALG00000035696	RRP1B	50	50.000	Gallus_gallus
ENSPLAG00000016684	-	55	79.902	ENSGAFG00000020559	-	90	81.675	Gambusia_affinis
ENSPLAG00000016684	-	55	66.494	ENSGACG00000001438	rrp1	59	66.319	Gasterosteus_aculeatus
ENSPLAG00000016684	-	52	43.562	ENSHGLG00000004968	RRP1B	53	43.014	Heterocephalus_glaber_female
ENSPLAG00000016684	-	50	55.163	ENSIPUG00000000673	-	76	52.228	Ictalurus_punctatus
ENSPLAG00000016684	-	50	43.966	ENSSTOG00000011790	RRP1B	51	42.033	Ictidomys_tridecemlineatus
ENSPLAG00000016684	-	59	67.773	ENSKMAG00000005539	rrp1	68	65.733	Kryptolebias_marmoratus
ENSPLAG00000016684	-	51	67.391	ENSLBEG00000021417	RRP1	99	64.736	Labrus_bergylta
ENSPLAG00000016684	-	53	49.735	ENSLACG00000017332	-	50	49.468	Latimeria_chalumnae
ENSPLAG00000016684	-	51	56.868	ENSLOCG00000004064	-	51	55.851	Lepisosteus_oculatus
ENSPLAG00000016684	-	60	41.452	ENSLAFG00000000766	RRP1B	87	44.444	Loxodonta_africana
ENSPLAG00000016684	-	51	52.672	ENSLAFG00000022901	RRP1	85	45.918	Loxodonta_africana
ENSPLAG00000016684	-	54	50.789	ENSMGAG00000014591	RRP1B	50	51.053	Meleagris_gallopavo
ENSPLAG00000016684	-	59	45.244	ENSMICG00000004700	RRP1	78	50.571	Microcebus_murinus
ENSPLAG00000016684	-	52	45.232	ENSMICG00000004686	RRP1B	50	45.232	Microcebus_murinus
ENSPLAG00000016684	-	55	39.863	ENSMOCG00000015687	Rrp1	83	42.680	Microtus_ochrogaster
ENSPLAG00000016684	-	50	42.029	ENSMOCG00000001117	Rrp1b	51	40.365	Microtus_ochrogaster
ENSPLAG00000016684	-	52	63.073	ENSMMOG00000019175	rrp1	95	62.368	Mola_mola
ENSPLAG00000016684	-	55	47.059	ENSMODG00000021033	RRP1B	51	47.059	Monodelphis_domestica
ENSPLAG00000016684	-	55	67.885	ENSMALG00000010310	rrp1	99	67.885	Monopterus_albus
ENSPLAG00000016684	-	55	39.740	MGP_CAROLIEiJ_G0021376	Rrp1b	57	58.209	Mus_caroli
ENSPLAG00000016684	-	51	41.926	MGP_PahariEiJ_G0023695	Rrp1b	57	58.209	Mus_pahari
ENSPLAG00000016684	-	55	41.039	MGP_SPRETEiJ_G0022290	Rrp1b	57	59.701	Mus_spretus
ENSPLAG00000016684	-	52	54.724	ENSMPUG00000009826	RRP1	69	56.962	Mustela_putorius_furo
ENSPLAG00000016684	-	52	45.504	ENSNLEG00000001490	RRP1B	50	45.504	Nomascus_leucogenys
ENSPLAG00000016684	-	55	48.052	ENSOANG00000006472	-	97	47.273	Ornithorhynchus_anatinus
ENSPLAG00000016684	-	50	44.857	ENSOANG00000006470	RRP1B	56	41.355	Ornithorhynchus_anatinus
ENSPLAG00000016684	-	59	65.111	ENSORLG00020007199	-	54	61.283	Oryzias_latipes_hni
ENSPLAG00000016684	-	55	65.803	ENSOMEG00000016910	-	89	44.928	Oryzias_melastigma
ENSPLAG00000016684	-	50	45.559	ENSOGAG00000009872	RRP1B	53	45.272	Otolemur_garnettii
ENSPLAG00000016684	-	52	43.478	ENSPPRG00000010356	RRP1B	50	43.478	Panthera_pardus
ENSPLAG00000016684	-	53	49.462	ENSPPRG00000010656	RRP1	82	49.459	Panthera_pardus
ENSPLAG00000016684	-	52	53.867	ENSPSIG00000008152	RRP1B	51	48.449	Pelodiscus_sinensis
ENSPLAG00000016684	-	52	49.733	ENSPMGG00000007512	-	93	48.462	Periophthalmus_magnuspinnatus
ENSPLAG00000016684	-	50	42.529	ENSPEMG00000022490	Rrp1b	52	41.085	Peromyscus_maniculatus_bairdii
ENSPLAG00000016684	-	55	46.465	ENSPCIG00000015513	RRP1B	66	41.201	Phascolarctos_cinereus
ENSPLAG00000016684	-	99	87.139	ENSPFOG00000007424	-	83	87.572	Poecilia_formosa
ENSPLAG00000016684	-	99	98.124	ENSPMEG00000007042	-	82	98.124	Poecilia_mexicana
ENSPLAG00000016684	-	99	91.066	ENSPREG00000015673	-	82	90.490	Poecilia_reticulata
ENSPLAG00000016684	-	53	45.405	ENSPCOG00000017927	RRP1B	50	45.405	Propithecus_coquereli
ENSPLAG00000016684	-	50	43.391	ENSRNOG00000001194	Rrp1b	52	41.131	Rattus_norvegicus
ENSPLAG00000016684	-	52	45.777	ENSRROG00000031499	RRP1B	53	45.777	Rhinopithecus_roxellana
ENSPLAG00000016684	-	51	47.887	ENSSHAG00000017789	RRP1B	59	41.394	Sarcophilus_harrisii
ENSPLAG00000016684	-	50	50.798	ENSSFOG00015003932	-	65	47.653	Scleropages_formosus
ENSPLAG00000016684	-	57	69.042	ENSSMAG00000016847	-	92	68.831	Scophthalmus_maximus
ENSPLAG00000016684	-	50	49.859	ENSSPUG00000002834	RRP1B	61	42.801	Sphenodon_punctatus
ENSPLAG00000016684	-	55	44.531	ENSSSCG00000021698	RRP1B	58	44.531	Sus_scrofa
ENSPLAG00000016684	-	53	48.525	ENSSSCG00000037061	RRP1	79	49.448	Sus_scrofa
ENSPLAG00000016684	-	51	65.363	ENSTRUG00000017592	rrp1	100	64.045	Takifugu_rubripes
ENSPLAG00000016684	-	51	62.570	ENSTNIG00000005053	rrp1	57	63.966	Tetraodon_nigroviridis
ENSPLAG00000016684	-	54	42.520	ENSTTRG00000000723	RRP1B	52	42.010	Tursiops_truncatus
ENSPLAG00000016684	-	52	44.959	ENSUAMG00000026765	RRP1B	53	44.959	Ursus_americanus
ENSPLAG00000016684	-	50	41.737	ENSUMAG00000025510	RRP1B	71	41.509	Ursus_maritimus
ENSPLAG00000016684	-	57	42.336	ENSUMAG00000025507	RRP1	82	43.827	Ursus_maritimus
ENSPLAG00000016684	-	67	39.916	ENSXETG00000013683	rrp1b	74	40.126	Xenopus_tropicalis
ENSPLAG00000016684	-	99	85.164	ENSXMAG00000023123	-	87	84.451	Xiphophorus_maculatus