EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000016848 (Gene tree)
Gene ID: 106960329
Gene Symbol: rpusd4
Alias: -
Full Name: RNA pseudouridylate synthase domain-containing protein 4-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 5043 bases
Position: chrKQ546492.1:113312-118354
Accession: 106960329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000013370	PseudoU_synth_2	PF00849.22	4.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000021338	-	2801	XM_015053372	ENSPLAP00000013370	391 (aa)	XP_014908858	UPI00072DCAF4

Gene Model

Click here to download ENSPLAG00000016848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000016848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000016848	rpusd4	81	52.000	ENSG00000165526	RPUSD4	85	52.000	Homo_sapiens
ENSPLAG00000016848	rpusd4	100	69.192	ENSAPOG00000011024	rpusd4	98	69.192	Acanthochromis_polyacanthus
ENSPLAG00000016848	rpusd4	88	49.425	ENSAMEG00000000127	-	90	49.425	Ailuropoda_melanoleuca
ENSPLAG00000016848	rpusd4	57	55.882	ENSAMEG00000005953	-	96	55.882	Ailuropoda_melanoleuca
ENSPLAG00000016848	rpusd4	84	73.556	ENSACIG00000003533	rpusd4	95	73.556	Amphilophus_citrinellus
ENSPLAG00000016848	rpusd4	99	69.367	ENSAOCG00000015409	rpusd4	97	69.367	Amphiprion_ocellaris
ENSPLAG00000016848	rpusd4	99	69.367	ENSAPEG00000018935	rpusd4	97	69.367	Amphiprion_percula
ENSPLAG00000016848	rpusd4	100	67.929	ENSATEG00000008059	rpusd4	97	67.929	Anabas_testudineus
ENSPLAG00000016848	rpusd4	71	51.071	ENSAPLG00000013250	RPUSD4	98	50.000	Anas_platyrhynchos
ENSPLAG00000016848	rpusd4	87	48.276	ENSACAG00000000189	RPUSD4	93	48.276	Anolis_carolinensis
ENSPLAG00000016848	rpusd4	87	49.133	ENSANAG00000024050	RPUSD4	90	49.133	Aotus_nancymaae
ENSPLAG00000016848	rpusd4	99	70.408	ENSACLG00000020996	rpusd4	99	70.408	Astatotilapia_calliptera
ENSPLAG00000016848	rpusd4	86	58.702	ENSAMXG00000031479	rpusd4	95	58.702	Astyanax_mexicanus
ENSPLAG00000016848	rpusd4	86	49.706	ENSBTAG00000020900	RPUSD4	87	49.706	Bos_taurus
ENSPLAG00000016848	rpusd4	88	48.571	ENSCJAG00000042850	RPUSD4	86	48.571	Callithrix_jacchus
ENSPLAG00000016848	rpusd4	78	53.398	ENSCAFG00000010488	RPUSD4	90	50.862	Canis_familiaris
ENSPLAG00000016848	rpusd4	78	53.398	ENSCAFG00020010621	RPUSD4	90	50.862	Canis_lupus_dingo
ENSPLAG00000016848	rpusd4	84	49.849	ENSCHIG00000009975	RPUSD4	87	48.974	Capra_hircus
ENSPLAG00000016848	rpusd4	88	50.287	ENSTSYG00000008456	RPUSD4	90	50.287	Carlito_syrichta
ENSPLAG00000016848	rpusd4	62	48.980	ENSCAPG00000006040	RPUSD4	93	48.980	Cavia_aperea
ENSPLAG00000016848	rpusd4	92	49.451	ENSCPOG00000014971	RPUSD4	93	49.451	Cavia_porcellus
ENSPLAG00000016848	rpusd4	88	48.286	ENSCCAG00000027838	RPUSD4	92	48.286	Cebus_capucinus
ENSPLAG00000016848	rpusd4	88	48.571	ENSCATG00000041570	RPUSD4	90	48.571	Cercocebus_atys
ENSPLAG00000016848	rpusd4	87	51.895	ENSCLAG00000016553	RPUSD4	88	51.895	Chinchilla_lanigera
ENSPLAG00000016848	rpusd4	88	47.550	ENSCSAG00000002274	RPUSD4	90	47.550	Chlorocebus_sabaeus
ENSPLAG00000016848	rpusd4	69	51.103	ENSCHOG00000010249	RPUSD4	94	51.103	Choloepus_hoffmanni
ENSPLAG00000016848	rpusd4	73	53.633	ENSCPBG00000011175	RPUSD4	99	53.633	Chrysemys_picta_bellii
ENSPLAG00000016848	rpusd4	69	39.068	ENSCSAVG00000000872	-	54	39.068	Ciona_savignyi
ENSPLAG00000016848	rpusd4	81	51.070	ENSCANG00000039684	RPUSD4	90	49.292	Colobus_angolensis_palliatus
ENSPLAG00000016848	rpusd4	87	50.581	ENSCGRG00001024141	Rpusd4	89	50.581	Cricetulus_griseus_chok1gshd
ENSPLAG00000016848	rpusd4	87	50.581	ENSCGRG00000014415	Rpusd4	89	50.581	Cricetulus_griseus_crigri
ENSPLAG00000016848	rpusd4	100	78.117	ENSCVAG00000008761	rpusd4	99	78.117	Cyprinodon_variegatus
ENSPLAG00000016848	rpusd4	100	78.117	ENSCVAG00000000392	rpusd4	100	78.117	Cyprinodon_variegatus
ENSPLAG00000016848	rpusd4	83	57.622	ENSDARG00000012674	rpusd4	90	57.622	Danio_rerio
ENSPLAG00000016848	rpusd4	85	50.149	ENSDNOG00000020026	RPUSD4	86	50.149	Dasypus_novemcinctus
ENSPLAG00000016848	rpusd4	94	47.027	ENSDORG00000016717	Rpusd4	92	47.945	Dipodomys_ordii
ENSPLAG00000016848	rpusd4	87	50.725	ENSETEG00000013953	RPUSD4	89	51.020	Echinops_telfairi
ENSPLAG00000016848	rpusd4	88	48.857	ENSEASG00005022982	RPUSD4	90	48.857	Equus_asinus_asinus
ENSPLAG00000016848	rpusd4	88	49.143	ENSECAG00000000557	RPUSD4	90	49.143	Equus_caballus
ENSPLAG00000016848	rpusd4	66	55.801	ENSEEUG00000014036	RPUSD4	68	55.801	Erinaceus_europaeus
ENSPLAG00000016848	rpusd4	94	58.824	ENSELUG00000008075	rpusd4	97	58.824	Esox_lucius
ENSPLAG00000016848	rpusd4	88	48.571	ENSFCAG00000029789	RPUSD4	90	49.143	Felis_catus
ENSPLAG00000016848	rpusd4	84	46.970	ENSFALG00000005171	RPUSD4	96	46.970	Ficedula_albicollis
ENSPLAG00000016848	rpusd4	93	48.634	ENSFDAG00000014307	RPUSD4	95	48.634	Fukomys_damarensis
ENSPLAG00000016848	rpusd4	100	80.563	ENSFHEG00000004329	rpusd4	100	80.563	Fundulus_heteroclitus
ENSPLAG00000016848	rpusd4	84	64.329	ENSGMOG00000017726	rpusd4	97	64.157	Gadus_morhua
ENSPLAG00000016848	rpusd4	72	53.333	ENSGALG00000024326	RPUSD4	94	48.817	Gallus_gallus
ENSPLAG00000016848	rpusd4	100	93.606	ENSGAFG00000021559	rpusd4	100	93.606	Gambusia_affinis
ENSPLAG00000016848	rpusd4	86	71.513	ENSGACG00000001657	rpusd4	97	76.534	Gasterosteus_aculeatus
ENSPLAG00000016848	rpusd4	93	49.185	ENSGAGG00000000132	RPUSD4	98	49.185	Gopherus_agassizii
ENSPLAG00000016848	rpusd4	81	52.308	ENSGGOG00000016494	RPUSD4	90	50.427	Gorilla_gorilla
ENSPLAG00000016848	rpusd4	99	70.812	ENSHBUG00000022838	rpusd4	99	70.812	Haplochromis_burtoni
ENSPLAG00000016848	rpusd4	93	48.907	ENSHGLG00000002285	RPUSD4	94	48.907	Heterocephalus_glaber_female
ENSPLAG00000016848	rpusd4	93	48.907	ENSHGLG00100006385	RPUSD4	94	48.907	Heterocephalus_glaber_male
ENSPLAG00000016848	rpusd4	99	65.561	ENSHCOG00000006612	rpusd4	99	65.561	Hippocampus_comes
ENSPLAG00000016848	rpusd4	91	55.989	ENSIPUG00000023879	rusd4	91	55.989	Ictalurus_punctatus
ENSPLAG00000016848	rpusd4	87	50.729	ENSSTOG00000025280	RPUSD4	92	50.729	Ictidomys_tridecemlineatus
ENSPLAG00000016848	rpusd4	88	49.575	ENSJJAG00000018673	Rpusd4	94	49.575	Jaculus_jaculus
ENSPLAG00000016848	rpusd4	99	67.929	ENSKMAG00000021805	rpusd4	100	67.929	Kryptolebias_marmoratus
ENSPLAG00000016848	rpusd4	94	68.734	ENSLBEG00000020394	rpusd4	93	75.449	Labrus_bergylta
ENSPLAG00000016848	rpusd4	84	51.652	ENSLACG00000011028	RPUSD4	87	49.724	Latimeria_chalumnae
ENSPLAG00000016848	rpusd4	94	43.158	ENSLOCG00000003124	rpusd4	99	43.158	Lepisosteus_oculatus
ENSPLAG00000016848	rpusd4	87	51.009	ENSLAFG00000005211	RPUSD4	100	44.746	Loxodonta_africana
ENSPLAG00000016848	rpusd4	88	48.857	ENSMFAG00000039513	RPUSD4	90	48.857	Macaca_fascicularis
ENSPLAG00000016848	rpusd4	88	48.571	ENSMMUG00000007933	RPUSD4	90	48.571	Macaca_mulatta
ENSPLAG00000016848	rpusd4	88	49.143	ENSMNEG00000027414	RPUSD4	90	49.143	Macaca_nemestrina
ENSPLAG00000016848	rpusd4	81	51.077	ENSMLEG00000042461	RPUSD4	85	51.077	Mandrillus_leucophaeus
ENSPLAG00000016848	rpusd4	94	72.951	ENSMAMG00000023839	rpusd4	94	72.951	Mastacembelus_armatus
ENSPLAG00000016848	rpusd4	99	70.408	ENSMZEG00005011999	rpusd4	99	70.408	Maylandia_zebra
ENSPLAG00000016848	rpusd4	72	51.930	ENSMGAG00000000840	RPUSD4	99	48.024	Meleagris_gallopavo
ENSPLAG00000016848	rpusd4	87	50.437	ENSMAUG00000010280	Rpusd4	89	50.437	Mesocricetus_auratus
ENSPLAG00000016848	rpusd4	87	49.711	ENSMICG00000015979	RPUSD4	90	53.618	Microcebus_murinus
ENSPLAG00000016848	rpusd4	86	49.118	ENSMOCG00000000661	Rpusd4	88	49.118	Microtus_ochrogaster
ENSPLAG00000016848	rpusd4	82	72.586	ENSMMOG00000021731	rpusd4	95	72.586	Mola_mola
ENSPLAG00000016848	rpusd4	82	52.308	ENSMODG00000004521	RPUSD4	81	52.308	Monodelphis_domestica
ENSPLAG00000016848	rpusd4	79	73.941	ENSMALG00000005839	rpusd4	98	71.429	Monopterus_albus
ENSPLAG00000016848	rpusd4	86	50.000	MGP_CAROLIEiJ_G0031954	Rpusd4	88	50.000	Mus_caroli
ENSPLAG00000016848	rpusd4	93	48.787	ENSMUSG00000032044	Rpusd4	95	48.787	Mus_musculus
ENSPLAG00000016848	rpusd4	86	50.000	MGP_PahariEiJ_G0014819	Rpusd4	88	50.000	Mus_pahari
ENSPLAG00000016848	rpusd4	86	50.296	MGP_SPRETEiJ_G0033078	Rpusd4	87	50.296	Mus_spretus
ENSPLAG00000016848	rpusd4	88	50.000	ENSMPUG00000006608	RPUSD4	90	50.000	Mustela_putorius_furo
ENSPLAG00000016848	rpusd4	84	50.000	ENSMLUG00000017328	-	85	50.000	Myotis_lucifugus
ENSPLAG00000016848	rpusd4	65	50.781	ENSMLUG00000029348	-	99	50.781	Myotis_lucifugus
ENSPLAG00000016848	rpusd4	87	51.594	ENSNGAG00000020847	Rpusd4	89	51.594	Nannospalax_galili
ENSPLAG00000016848	rpusd4	84	75.455	ENSNBRG00000005207	rpusd4	95	75.455	Neolamprologus_brichardi
ENSPLAG00000016848	rpusd4	88	49.429	ENSNLEG00000007465	RPUSD4	90	49.429	Nomascus_leucogenys
ENSPLAG00000016848	rpusd4	85	52.083	ENSMEUG00000004370	RPUSD4	88	52.083	Notamacropus_eugenii
ENSPLAG00000016848	rpusd4	87	49.854	ENSODEG00000004577	RPUSD4	88	49.854	Octodon_degus
ENSPLAG00000016848	rpusd4	99	71.100	ENSONIG00000018879	rpusd4	99	71.100	Oreochromis_niloticus
ENSPLAG00000016848	rpusd4	74	49.329	ENSOANG00000007247	RPUSD4	95	49.169	Ornithorhynchus_anatinus
ENSPLAG00000016848	rpusd4	98	48.329	ENSOCUG00000017039	RPUSD4	98	48.205	Oryctolagus_cuniculus
ENSPLAG00000016848	rpusd4	91	67.318	ENSORLG00000002750	rpusd4	93	68.876	Oryzias_latipes
ENSPLAG00000016848	rpusd4	94	67.030	ENSORLG00020002044	rpusd4	90	67.030	Oryzias_latipes_hni
ENSPLAG00000016848	rpusd4	93	66.393	ENSORLG00015020034	rpusd4	90	66.393	Oryzias_latipes_hsok
ENSPLAG00000016848	rpusd4	93	70.055	ENSOMEG00000004861	rpusd4	88	70.055	Oryzias_melastigma
ENSPLAG00000016848	rpusd4	84	51.662	ENSOGAG00000008922	RPUSD4	89	50.720	Otolemur_garnettii
ENSPLAG00000016848	rpusd4	84	49.849	ENSOARG00000012238	RPUSD4	87	48.974	Ovis_aries
ENSPLAG00000016848	rpusd4	81	52.000	ENSPPAG00000042883	RPUSD4	84	50.142	Pan_paniscus
ENSPLAG00000016848	rpusd4	88	49.143	ENSPPRG00000003081	RPUSD4	90	49.143	Panthera_pardus
ENSPLAG00000016848	rpusd4	88	49.143	ENSPTIG00000012059	RPUSD4	88	51.447	Panthera_tigris_altaica
ENSPLAG00000016848	rpusd4	81	52.000	ENSPTRG00000004454	RPUSD4	90	50.142	Pan_troglodytes
ENSPLAG00000016848	rpusd4	88	48.857	ENSPANG00000015040	RPUSD4	90	48.857	Papio_anubis
ENSPLAG00000016848	rpusd4	94	53.659	ENSPKIG00000023986	rpusd4	93	53.659	Paramormyrops_kingsleyae
ENSPLAG00000016848	rpusd4	75	52.862	ENSPSIG00000014268	RPUSD4	93	52.862	Pelodiscus_sinensis
ENSPLAG00000016848	rpusd4	87	66.959	ENSPMGG00000002806	rpusd4	94	66.471	Periophthalmus_magnuspinnatus
ENSPLAG00000016848	rpusd4	86	45.000	ENSPEMG00000000278	Rpusd4	87	45.000	Peromyscus_maniculatus_bairdii
ENSPLAG00000016848	rpusd4	79	39.941	ENSPMAG00000008183	rpusd4	97	39.941	Petromyzon_marinus
ENSPLAG00000016848	rpusd4	86	52.212	ENSPCIG00000010212	RPUSD4	91	52.212	Phascolarctos_cinereus
ENSPLAG00000016848	rpusd4	97	98.947	ENSPFOG00000019030	rpusd4	100	98.947	Poecilia_formosa
ENSPLAG00000016848	rpusd4	100	97.954	ENSPMEG00000017534	rpusd4	100	97.954	Poecilia_mexicana
ENSPLAG00000016848	rpusd4	97	94.751	ENSPREG00000005689	rpusd4	98	94.751	Poecilia_reticulata
ENSPLAG00000016848	rpusd4	88	49.143	ENSPPYG00000004043	RPUSD4	90	49.143	Pongo_abelii
ENSPLAG00000016848	rpusd4	63	56.716	ENSPCAG00000000753	RPUSD4	72	54.098	Procavia_capensis
ENSPLAG00000016848	rpusd4	87	48.266	ENSPCOG00000020694	RPUSD4	90	48.266	Propithecus_coquereli
ENSPLAG00000016848	rpusd4	88	48.991	ENSPVAG00000000988	RPUSD4	90	48.991	Pteropus_vampyrus
ENSPLAG00000016848	rpusd4	99	70.992	ENSPNYG00000009652	rpusd4	99	70.992	Pundamilia_nyererei
ENSPLAG00000016848	rpusd4	91	57.660	ENSPNAG00000012264	rpusd4	93	57.660	Pygocentrus_nattereri
ENSPLAG00000016848	rpusd4	86	51.183	ENSRNOG00000011567	Rpusd4	87	51.183	Rattus_norvegicus
ENSPLAG00000016848	rpusd4	86	49.128	ENSRBIG00000034842	RPUSD4	90	48.571	Rhinopithecus_bieti
ENSPLAG00000016848	rpusd4	86	49.128	ENSRROG00000039753	RPUSD4	90	48.571	Rhinopithecus_roxellana
ENSPLAG00000016848	rpusd4	87	47.826	ENSSBOG00000030413	RPUSD4	90	47.826	Saimiri_boliviensis_boliviensis
ENSPLAG00000016848	rpusd4	75	53.691	ENSSHAG00000008304	RPUSD4	97	53.691	Sarcophilus_harrisii
ENSPLAG00000016848	rpusd4	84	57.100	ENSSFOG00015006203	rpusd4	89	57.100	Scleropages_formosus
ENSPLAG00000016848	rpusd4	100	64.899	ENSSMAG00000020978	rpusd4	100	64.899	Scophthalmus_maximus
ENSPLAG00000016848	rpusd4	99	67.939	ENSSDUG00000013399	rpusd4	100	67.939	Seriola_dumerili
ENSPLAG00000016848	rpusd4	99	67.939	ENSSLDG00000023507	rpusd4	100	67.939	Seriola_lalandi_dorsalis
ENSPLAG00000016848	rpusd4	93	49.591	ENSSPUG00000001401	RPUSD4	98	49.319	Sphenodon_punctatus
ENSPLAG00000016848	rpusd4	100	69.036	ENSSPAG00000012163	rpusd4	100	69.036	Stegastes_partitus
ENSPLAG00000016848	rpusd4	87	48.696	ENSSSCG00000015233	RPUSD4	89	48.696	Sus_scrofa
ENSPLAG00000016848	rpusd4	76	50.000	ENSTGUG00000000773	RPUSD4	99	50.000	Taeniopygia_guttata
ENSPLAG00000016848	rpusd4	98	63.683	ENSTRUG00000012283	rpusd4	98	63.683	Takifugu_rubripes
ENSPLAG00000016848	rpusd4	99	64.051	ENSTNIG00000014676	rpusd4	100	64.051	Tetraodon_nigroviridis
ENSPLAG00000016848	rpusd4	88	49.138	ENSTTRG00000001555	RPUSD4	90	49.138	Tursiops_truncatus
ENSPLAG00000016848	rpusd4	88	50.000	ENSUMAG00000002219	RPUSD4	90	50.000	Ursus_maritimus
ENSPLAG00000016848	rpusd4	62	47.521	ENSVPAG00000001066	RPUSD4	88	47.521	Vicugna_pacos
ENSPLAG00000016848	rpusd4	78	53.398	ENSVVUG00000020101	RPUSD4	90	50.862	Vulpes_vulpes
ENSPLAG00000016848	rpusd4	100	93.350	ENSXCOG00000004676	rpusd4	100	93.350	Xiphophorus_couchianus
ENSPLAG00000016848	rpusd4	100	93.350	ENSXMAG00000023351	rpusd4	100	93.350	Xiphophorus_maculatus