EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000016866 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 71211 bases
Position: chrKQ545336.1:693725-764935
Accession: 106949558
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000013355	RRM_1	PF00076.22	1.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000029916	-	1146	XM_015035899	ENSPLAP00000013355	381 (aa)	XP_014891385	-

Gene Model

Click here to download ENSPLAG00000016866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000016866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000016866	-	76	55.405	ENSPLAG00000013864	rbms1a	73	56.738
ENSPLAG00000016866	-	83	68.966	ENSPLAG00000001303	rbms2a	78	68.966
ENSPLAG00000016866	-	83	65.000	ENSPLAG00000012535	-	74	65.000
ENSPLAG00000016866	-	83	66.254	ENSPLAG00000000920	RBMS1	76	66.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000016866	-	83	81.056	ENSG00000144642	RBMS3	76	80.745	Homo_sapiens
ENSPLAG00000016866	-	82	81.931	ENSAPOG00000003432	-	77	81.931	Acanthochromis_polyacanthus
ENSPLAG00000016866	-	83	85.876	ENSAPOG00000007266	rbms3	84	93.793	Acanthochromis_polyacanthus
ENSPLAG00000016866	-	74	75.410	ENSAMEG00000005947	RBMS3	100	75.410	Ailuropoda_melanoleuca
ENSPLAG00000016866	-	83	80.805	ENSACIG00000021113	RBMS3	84	80.435	Amphilophus_citrinellus
ENSPLAG00000016866	-	67	85.827	ENSACIG00000006987	-	69	85.827	Amphilophus_citrinellus
ENSPLAG00000016866	-	83	94.410	ENSAOCG00000021274	rbms3	75	94.410	Amphiprion_ocellaris
ENSPLAG00000016866	-	82	81.931	ENSAOCG00000024104	-	77	74.118	Amphiprion_ocellaris
ENSPLAG00000016866	-	82	75.633	ENSAPEG00000009481	-	76	75.633	Amphiprion_percula
ENSPLAG00000016866	-	72	95.683	ENSAPEG00000016299	rbms3	73	95.683	Amphiprion_percula
ENSPLAG00000016866	-	83	94.099	ENSATEG00000024295	rbms3	76	94.099	Anabas_testudineus
ENSPLAG00000016866	-	82	81.931	ENSATEG00000008433	-	77	81.931	Anabas_testudineus
ENSPLAG00000016866	-	83	78.743	ENSAPLG00000012270	RBMS3	77	78.743	Anas_platyrhynchos
ENSPLAG00000016866	-	83	80.745	ENSACAG00000028664	RBMS3	76	80.745	Anolis_carolinensis
ENSPLAG00000016866	-	83	77.910	ENSANAG00000021899	RBMS3	77	77.612	Aotus_nancymaae
ENSPLAG00000016866	-	82	81.308	ENSACLG00000008976	-	73	72.911	Astatotilapia_calliptera
ENSPLAG00000016866	-	83	93.478	ENSACLG00000018506	rbms3	83	93.478	Astatotilapia_calliptera
ENSPLAG00000016866	-	83	83.333	ENSAMXG00000020388	rbms3	77	83.333	Astyanax_mexicanus
ENSPLAG00000016866	-	83	81.366	ENSBTAG00000044062	RBMS3	83	77.219	Bos_taurus
ENSPLAG00000016866	-	83	77.910	ENSCJAG00000004312	RBMS3	77	77.612	Callithrix_jacchus
ENSPLAG00000016866	-	83	77.219	ENSCAFG00000005464	RBMS3	77	77.219	Canis_familiaris
ENSPLAG00000016866	-	83	77.219	ENSCAFG00020024980	RBMS3	77	76.923	Canis_lupus_dingo
ENSPLAG00000016866	-	83	80.745	ENSCHIG00000009144	RBMS3	76	80.435	Capra_hircus
ENSPLAG00000016866	-	82	77.711	ENSTSYG00000002615	RBMS3	100	77.711	Carlito_syrichta
ENSPLAG00000016866	-	83	76.250	ENSCAPG00000017783	RBMS3	81	75.938	Cavia_aperea
ENSPLAG00000016866	-	83	81.366	ENSCPOG00000006457	RBMS3	77	81.056	Cavia_porcellus
ENSPLAG00000016866	-	83	77.910	ENSCCAG00000008671	RBMS3	77	77.612	Cebus_capucinus
ENSPLAG00000016866	-	83	77.612	ENSCATG00000013222	RBMS3	77	77.313	Cercocebus_atys
ENSPLAG00000016866	-	83	81.366	ENSCLAG00000005866	RBMS3	76	81.056	Chinchilla_lanigera
ENSPLAG00000016866	-	70	78.309	ENSCSAG00000009655	RBMS3	99	77.941	Chlorocebus_sabaeus
ENSPLAG00000016866	-	83	76.923	ENSCHOG00000000758	RBMS3	77	76.923	Choloepus_hoffmanni
ENSPLAG00000016866	-	83	81.366	ENSCPBG00000022678	RBMS3	76	81.366	Chrysemys_picta_bellii
ENSPLAG00000016866	-	83	77.910	ENSCANG00000032137	RBMS3	77	77.612	Colobus_angolensis_palliatus
ENSPLAG00000016866	-	83	78.193	ENSCGRG00001007243	Rbms3	77	79.439	Cricetulus_griseus_chok1gshd
ENSPLAG00000016866	-	83	78.193	ENSCGRG00000004599	Rbms3	77	79.439	Cricetulus_griseus_crigri
ENSPLAG00000016866	-	83	92.236	ENSCSEG00000010011	RBMS3	79	92.236	Cynoglossus_semilaevis
ENSPLAG00000016866	-	83	81.173	ENSCSEG00000014677	-	79	80.783	Cynoglossus_semilaevis
ENSPLAG00000016866	-	82	81.308	ENSCVAG00000022814	-	83	81.308	Cyprinodon_variegatus
ENSPLAG00000016866	-	83	95.963	ENSCVAG00000022354	rbms3	76	95.963	Cyprinodon_variegatus
ENSPLAG00000016866	-	83	84.783	ENSDARG00000044574	rbms3	69	93.985	Danio_rerio
ENSPLAG00000016866	-	83	79.814	ENSDNOG00000016645	RBMS3	74	79.503	Dasypus_novemcinctus
ENSPLAG00000016866	-	83	80.435	ENSDORG00000007220	Rbms3	76	80.124	Dipodomys_ordii
ENSPLAG00000016866	-	83	62.908	ENSETEG00000009485	-	77	62.908	Echinops_telfairi
ENSPLAG00000016866	-	55	50.935	ENSEBUG00000005830	rbms3	66	50.935	Eptatretus_burgeri
ENSPLAG00000016866	-	83	80.745	ENSEASG00005006152	RBMS3	76	80.435	Equus_asinus_asinus
ENSPLAG00000016866	-	83	80.745	ENSECAG00000017871	RBMS3	76	80.435	Equus_caballus
ENSPLAG00000016866	-	72	69.283	ENSEEUG00000014337	RBMS3	74	69.283	Erinaceus_europaeus
ENSPLAG00000016866	-	82	81.308	ENSELUG00000006905	-	84	81.308	Esox_lucius
ENSPLAG00000016866	-	83	79.876	ENSELUG00000002862	rbms3	82	79.876	Esox_lucius
ENSPLAG00000016866	-	83	80.435	ENSFCAG00000002130	RBMS3	76	80.124	Felis_catus
ENSPLAG00000016866	-	83	81.677	ENSFALG00000009165	RBMS3	76	81.677	Ficedula_albicollis
ENSPLAG00000016866	-	83	80.745	ENSFDAG00000008278	RBMS3	76	80.435	Fukomys_damarensis
ENSPLAG00000016866	-	83	83.901	ENSFHEG00000004787	RBMS3	83	84.211	Fundulus_heteroclitus
ENSPLAG00000016866	-	82	74.854	ENSGMOG00000002600	-	82	75.146	Gadus_morhua
ENSPLAG00000016866	-	83	81.677	ENSGALG00000011439	RBMS3	76	81.677	Gallus_gallus
ENSPLAG00000016866	-	82	81.620	ENSGAFG00000003329	-	77	81.620	Gambusia_affinis
ENSPLAG00000016866	-	83	96.584	ENSGAFG00000000168	rbms3	83	96.584	Gambusia_affinis
ENSPLAG00000016866	-	70	79.121	ENSGAGG00000004039	RBMS3	100	79.121	Gopherus_agassizii
ENSPLAG00000016866	-	83	77.910	ENSGGOG00000007228	RBMS3	77	77.612	Gorilla_gorilla
ENSPLAG00000016866	-	82	81.308	ENSHBUG00000019785	-	75	76.833	Haplochromis_burtoni
ENSPLAG00000016866	-	83	80.745	ENSHGLG00000002170	RBMS3	76	80.435	Heterocephalus_glaber_female
ENSPLAG00000016866	-	83	80.745	ENSHGLG00100014278	RBMS3	76	80.435	Heterocephalus_glaber_male
ENSPLAG00000016866	-	82	80.124	ENSHCOG00000007894	-	80	80.124	Hippocampus_comes
ENSPLAG00000016866	-	83	83.951	ENSIPUG00000017680	rbms3	77	83.951	Ictalurus_punctatus
ENSPLAG00000016866	-	83	81.056	ENSSTOG00000006324	RBMS3	76	80.745	Ictidomys_tridecemlineatus
ENSPLAG00000016866	-	83	79.751	ENSJJAG00000014708	Rbms3	76	79.439	Jaculus_jaculus
ENSPLAG00000016866	-	82	81.620	ENSKMAG00000012586	-	77	81.620	Kryptolebias_marmoratus
ENSPLAG00000016866	-	83	94.118	ENSKMAG00000020500	rbms3	75	94.118	Kryptolebias_marmoratus
ENSPLAG00000016866	-	63	83.984	ENSLBEG00000006677	rbms3	95	83.984	Labrus_bergylta
ENSPLAG00000016866	-	82	80.938	ENSLBEG00000027388	-	76	81.562	Labrus_bergylta
ENSPLAG00000016866	-	83	82.298	ENSLACG00000010581	RBMS3	77	82.298	Latimeria_chalumnae
ENSPLAG00000016866	-	75	81.633	ENSLOCG00000002328	rbms3	100	81.633	Lepisosteus_oculatus
ENSPLAG00000016866	-	83	77.219	ENSLAFG00000000354	RBMS3	77	76.923	Loxodonta_africana
ENSPLAG00000016866	-	83	81.056	ENSMFAG00000033300	RBMS3	76	80.745	Macaca_fascicularis
ENSPLAG00000016866	-	83	81.056	ENSMMUG00000004404	RBMS3	76	80.745	Macaca_mulatta
ENSPLAG00000016866	-	83	77.910	ENSMNEG00000035839	RBMS3	83	76.923	Macaca_nemestrina
ENSPLAG00000016866	-	83	77.612	ENSMLEG00000029464	RBMS3	77	77.313	Mandrillus_leucophaeus
ENSPLAG00000016866	-	83	93.789	ENSMAMG00000024043	rbms3	76	93.789	Mastacembelus_armatus
ENSPLAG00000016866	-	82	82.555	ENSMAMG00000002176	-	71	82.555	Mastacembelus_armatus
ENSPLAG00000016866	-	82	81.308	ENSMZEG00005026469	-	75	78.209	Maylandia_zebra
ENSPLAG00000016866	-	83	93.478	ENSMZEG00005006308	rbms3	76	93.478	Maylandia_zebra
ENSPLAG00000016866	-	83	78.193	ENSMAUG00000016436	Rbms3	77	79.439	Mesocricetus_auratus
ENSPLAG00000016866	-	86	75.931	ENSMICG00000049249	RBMS3	79	76.608	Microcebus_murinus
ENSPLAG00000016866	-	83	77.570	ENSMOCG00000006997	Rbms3	77	78.816	Microtus_ochrogaster
ENSPLAG00000016866	-	82	83.281	ENSMMOG00000015071	-	76	83.281	Mola_mola
ENSPLAG00000016866	-	74	94.035	ENSMMOG00000008471	RBMS3	77	94.035	Mola_mola
ENSPLAG00000016866	-	83	74.566	ENSMODG00000015125	RBMS3	77	75.723	Monodelphis_domestica
ENSPLAG00000016866	-	83	94.099	ENSMALG00000019536	RBMS3	76	94.099	Monopterus_albus
ENSPLAG00000016866	-	82	82.243	ENSMALG00000009155	-	77	82.243	Monopterus_albus
ENSPLAG00000016866	-	83	77.882	MGP_CAROLIEiJ_G0032783	Rbms3	100	68.534	Mus_caroli
ENSPLAG00000016866	-	83	78.193	ENSMUSG00000039607	Rbms3	99	68.534	Mus_musculus
ENSPLAG00000016866	-	83	77.950	MGP_PahariEiJ_G0015650	Rbms3	100	68.534	Mus_pahari
ENSPLAG00000016866	-	83	78.193	MGP_SPRETEiJ_G0033930	Rbms3	100	68.534	Mus_spretus
ENSPLAG00000016866	-	83	77.219	ENSMPUG00000011956	RBMS3	77	76.923	Mustela_putorius_furo
ENSPLAG00000016866	-	83	81.056	ENSMLUG00000000659	RBMS3	76	80.745	Myotis_lucifugus
ENSPLAG00000016866	-	83	79.876	ENSNGAG00000014039	Rbms3	77	79.567	Nannospalax_galili
ENSPLAG00000016866	-	82	81.308	ENSNBRG00000018065	-	77	81.308	Neolamprologus_brichardi
ENSPLAG00000016866	-	83	77.910	ENSNLEG00000004129	RBMS3	77	77.612	Nomascus_leucogenys
ENSPLAG00000016866	-	83	69.139	ENSMEUG00000004772	RBMS3	77	70.326	Notamacropus_eugenii
ENSPLAG00000016866	-	83	76.855	ENSOPRG00000006808	RBMS3	65	76.855	Ochotona_princeps
ENSPLAG00000016866	-	83	81.056	ENSODEG00000003651	RBMS3	76	80.745	Octodon_degus
ENSPLAG00000016866	-	83	93.478	ENSONIG00000007172	rbms3	78	93.478	Oreochromis_niloticus
ENSPLAG00000016866	-	83	78.107	ENSOANG00000010529	RBMS3	77	78.107	Ornithorhynchus_anatinus
ENSPLAG00000016866	-	83	76.923	ENSOCUG00000004840	RBMS3	77	76.627	Oryctolagus_cuniculus
ENSPLAG00000016866	-	82	81.931	ENSORLG00000002306	-	73	87.747	Oryzias_latipes
ENSPLAG00000016866	-	83	93.146	ENSORLG00000005370	RBMS3	76	93.146	Oryzias_latipes
ENSPLAG00000016866	-	83	92.835	ENSORLG00020022674	RBMS3	76	92.835	Oryzias_latipes_hni
ENSPLAG00000016866	-	82	81.931	ENSORLG00020008496	-	77	81.931	Oryzias_latipes_hni
ENSPLAG00000016866	-	82	81.931	ENSORLG00015015719	-	77	81.931	Oryzias_latipes_hsok
ENSPLAG00000016866	-	83	93.458	ENSORLG00015005509	rbms3	76	93.458	Oryzias_latipes_hsok
ENSPLAG00000016866	-	83	93.146	ENSOMEG00000014805	RBMS3	83	93.146	Oryzias_melastigma
ENSPLAG00000016866	-	82	81.620	ENSOMEG00000007677	-	84	81.620	Oryzias_melastigma
ENSPLAG00000016866	-	83	76.331	ENSOARG00000014684	RBMS3	77	76.036	Ovis_aries
ENSPLAG00000016866	-	83	77.910	ENSPPAG00000036519	RBMS3	77	77.612	Pan_paniscus
ENSPLAG00000016866	-	83	77.313	ENSPPRG00000002761	RBMS3	77	77.015	Panthera_pardus
ENSPLAG00000016866	-	83	80.435	ENSPTIG00000011568	RBMS3	76	80.124	Panthera_tigris_altaica
ENSPLAG00000016866	-	83	81.056	ENSPTRG00000014709	RBMS3	76	80.745	Pan_troglodytes
ENSPLAG00000016866	-	83	77.612	ENSPANG00000010234	RBMS3	77	77.313	Papio_anubis
ENSPLAG00000016866	-	83	81.056	ENSPSIG00000005269	RBMS3	76	81.056	Pelodiscus_sinensis
ENSPLAG00000016866	-	82	81.562	ENSPMGG00000021683	-	83	81.590	Periophthalmus_magnuspinnatus
ENSPLAG00000016866	-	72	92.806	ENSPMGG00000021544	rbms3	73	92.806	Periophthalmus_magnuspinnatus
ENSPLAG00000016866	-	83	74.608	ENSPEMG00000001117	Rbms3	76	76.176	Peromyscus_maniculatus_bairdii
ENSPLAG00000016866	-	67	84.047	ENSPCIG00000006106	RBMS3	63	84.047	Phascolarctos_cinereus
ENSPLAG00000016866	-	83	97.205	ENSPFOG00000017887	rbms3	76	97.205	Poecilia_formosa
ENSPLAG00000016866	-	58	97.285	ENSPMEG00000012831	-	97	97.285	Poecilia_mexicana
ENSPLAG00000016866	-	82	81.620	ENSPMEG00000002993	-	77	81.620	Poecilia_mexicana
ENSPLAG00000016866	-	82	97.179	ENSPREG00000011880	rbms3	79	97.179	Poecilia_reticulata
ENSPLAG00000016866	-	82	81.620	ENSPREG00000018221	-	60	87.261	Poecilia_reticulata
ENSPLAG00000016866	-	83	63.127	ENSPPYG00000014050	RBMS3	65	62.832	Pongo_abelii
ENSPLAG00000016866	-	74	60.984	ENSPCAG00000006307	RBMS3	70	60.656	Procavia_capensis
ENSPLAG00000016866	-	83	78.209	ENSPCOG00000017136	RBMS3	77	77.910	Propithecus_coquereli
ENSPLAG00000016866	-	83	76.923	ENSPVAG00000014037	RBMS3	77	76.923	Pteropus_vampyrus
ENSPLAG00000016866	-	82	81.308	ENSPNYG00000012624	-	77	81.308	Pundamilia_nyererei
ENSPLAG00000016866	-	83	93.478	ENSPNYG00000010546	rbms3	76	93.478	Pundamilia_nyererei
ENSPLAG00000016866	-	83	83.642	ENSPNAG00000001800	rbms3	77	83.642	Pygocentrus_nattereri
ENSPLAG00000016866	-	83	78.193	ENSRNOG00000025881	Rbms3	77	79.439	Rattus_norvegicus
ENSPLAG00000016866	-	83	78.209	ENSRBIG00000035863	RBMS3	77	77.910	Rhinopithecus_bieti
ENSPLAG00000016866	-	83	78.209	ENSRROG00000027512	RBMS3	82	77.910	Rhinopithecus_roxellana
ENSPLAG00000016866	-	83	77.910	ENSSBOG00000020232	RBMS3	77	77.612	Saimiri_boliviensis_boliviensis
ENSPLAG00000016866	-	83	75.472	ENSSHAG00000002411	RBMS3	81	76.730	Sarcophilus_harrisii
ENSPLAG00000016866	-	82	83.281	ENSSFOG00015008578	rbms3	83	83.281	Scleropages_formosus
ENSPLAG00000016866	-	83	91.304	ENSSMAG00000004997	rbms3	88	91.304	Scophthalmus_maximus
ENSPLAG00000016866	-	72	84.532	ENSSMAG00000020065	-	75	84.532	Scophthalmus_maximus
ENSPLAG00000016866	-	83	94.720	ENSSDUG00000013656	RBMS3	77	94.720	Seriola_dumerili
ENSPLAG00000016866	-	82	81.931	ENSSDUG00000019287	-	77	81.931	Seriola_dumerili
ENSPLAG00000016866	-	82	81.931	ENSSLDG00000013224	-	77	81.931	Seriola_lalandi_dorsalis
ENSPLAG00000016866	-	83	95.031	ENSSLDG00000020276	RBMS3	75	95.031	Seriola_lalandi_dorsalis
ENSPLAG00000016866	-	72	63.140	ENSSARG00000000695	RBMS3	79	63.140	Sorex_araneus
ENSPLAG00000016866	-	76	78.261	ENSSPUG00000017197	RBMS3	98	78.261	Sphenodon_punctatus
ENSPLAG00000016866	-	82	81.931	ENSSPAG00000003983	-	77	72.647	Stegastes_partitus
ENSPLAG00000016866	-	83	94.720	ENSSPAG00000020693	rbms3	77	96.043	Stegastes_partitus
ENSPLAG00000016866	-	83	80.745	ENSSSCG00000036381	RBMS3	76	80.435	Sus_scrofa
ENSPLAG00000016866	-	82	78.507	ENSTGUG00000003572	RBMS3	100	78.507	Taeniopygia_guttata
ENSPLAG00000016866	-	83	91.304	ENSTRUG00000021719	RBMS3	76	91.304	Takifugu_rubripes
ENSPLAG00000016866	-	82	80.805	ENSTRUG00000007482	-	79	80.805	Takifugu_rubripes
ENSPLAG00000016866	-	72	78.840	ENSTBEG00000005362	RBMS3	79	78.840	Tupaia_belangeri
ENSPLAG00000016866	-	83	76.558	ENSTTRG00000006202	RBMS3	77	76.558	Tursiops_truncatus
ENSPLAG00000016866	-	83	77.219	ENSUMAG00000000263	RBMS3	77	77.219	Ursus_maritimus
ENSPLAG00000016866	-	82	66.867	ENSVPAG00000003842	RBMS3	81	66.366	Vicugna_pacos
ENSPLAG00000016866	-	83	77.219	ENSVVUG00000004660	RBMS3	71	89.024	Vulpes_vulpes
ENSPLAG00000016866	-	75	73.463	ENSXETG00000032055	RBMS3	99	73.463	Xenopus_tropicalis
ENSPLAG00000016866	-	81	71.296	ENSXCOG00000019600	-	87	71.605	Xiphophorus_couchianus
ENSPLAG00000016866	-	83	96.584	ENSXMAG00000021783	rbms3	76	96.584	Xiphophorus_maculatus
ENSPLAG00000016866	-	82	81.620	ENSXMAG00000014382	-	77	81.620	Xiphophorus_maculatus