EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000017025 (Gene tree)
Gene ID
106960306
Gene Symbol
-
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Minus strand
Length
6744 bases
Position
chrKQ546491.1:389-7132
Accession
106960306
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000013510RRM_1PF00076.221.3e-4112
ENSPLAP00000013510RRM_1PF00076.221.3e-4122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000021520-3418XM_015053344ENSPLAP00000013510559 (aa)XP_014908830UPI00072E61A7
Gene Model
Click here to download ENSPLAG00000017025's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017025's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000017025-5335.294ENSPLAG00000014365u2af2a6737.255
ENSPLAG00000017025-9082.136ENSPLAG00000010754puf60b10082.330
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000017025-9279.395ENSG00000179950PUF6010080.732Homo_sapiens
ENSPLAG00000017025-9281.818ENSAPOG00000001713puf60b10081.818Acanthochromis_polyacanthus
ENSPLAG00000017025-9078.917ENSAMEG00000006406PUF609875.730Ailuropoda_melanoleuca
ENSPLAG00000017025-9082.330ENSACIG00000021705puf60b10082.330Amphilophus_citrinellus
ENSPLAG00000017025-9082.227ENSACIG00000003263-10082.261Amphilophus_citrinellus
ENSPLAG00000017025-9289.293ENSAOCG00000015558-10089.293Amphiprion_ocellaris
ENSPLAG00000017025-9281.818ENSAOCG00000005395puf60b10082.524Amphiprion_ocellaris
ENSPLAG00000017025-9177.735ENSAPEG00000011923puf60b9977.735Amphiprion_percula
ENSPLAG00000017025-9077.886ENSAPEG00000001836-10078.420Amphiprion_percula
ENSPLAG00000017025-9290.038ENSATEG00000006303-10090.038Anabas_testudineus
ENSPLAG00000017025-9281.629ENSATEG00000001730puf60b10081.629Anabas_testudineus
ENSPLAG00000017025-9180.344ENSAPLG00000010150PUF6010080.344Anas_platyrhynchos
ENSPLAG00000017025-9080.230ENSACAG00000001645PUF6010077.901Anolis_carolinensis
ENSPLAG00000017025-9379.511ENSANAG00000018626PUF6010080.925Aotus_nancymaae
ENSPLAG00000017025-9082.330ENSACLG00000004462puf60b10082.330Astatotilapia_calliptera
ENSPLAG00000017025-9182.042ENSAMXG00000036570puf60a10080.110Astyanax_mexicanus
ENSPLAG00000017025-9074.763ENSAMXG00000041030puf60b10075.947Astyanax_mexicanus
ENSPLAG00000017025-9279.584ENSBTAG00000037493PUF609880.925Bos_taurus
ENSPLAG00000017025-7250.173WBGene00004389rnp-68748.571Caenorhabditis_elegans
ENSPLAG00000017025-9279.395ENSCJAG00000021485PUF609979.434Callithrix_jacchus
ENSPLAG00000017025-9080.502ENSCAFG00000001400PUF609877.215Canis_familiaris
ENSPLAG00000017025-9279.584ENSCAFG00020018754PUF609979.623Canis_lupus_dingo
ENSPLAG00000017025-9080.888ENSCHIG00000001618PUF609177.596Capra_hircus
ENSPLAG00000017025-9279.584ENSTSYG00000011912PUF6010080.925Carlito_syrichta
ENSPLAG00000017025-9076.245ENSCPOG00000014613PUF609973.201Cavia_porcellus
ENSPLAG00000017025-9279.395ENSCCAG00000007744PUF609979.434Cebus_capucinus
ENSPLAG00000017025-9279.395ENSCATG00000035405PUF609979.434Cercocebus_atys
ENSPLAG00000017025-9080.888ENSCLAG00000009154PUF609876.937Chinchilla_lanigera
ENSPLAG00000017025-9080.695ENSCSAG00000008878PUF6010080.732Chlorocebus_sabaeus
ENSPLAG00000017025-9080.695ENSCPBG00000005595PUF609979.507Chrysemys_picta_bellii
ENSPLAG00000017025-9049.318ENSCING00000008436-9550.495Ciona_intestinalis
ENSPLAG00000017025-5757.910ENSCING00000002156-8758.333Ciona_intestinalis
ENSPLAG00000017025-8849.400ENSCSAVG00000004765-9849.901Ciona_savignyi
ENSPLAG00000017025-8752.885ENSCSAVG00000001385-9953.269Ciona_savignyi
ENSPLAG00000017025-7280.668ENSCANG00000041843PUF6010080.714Colobus_angolensis_palliatus
ENSPLAG00000017025-9179.962ENSCGRG00001017442Puf609877.658Cricetulus_griseus_chok1gshd
ENSPLAG00000017025-9179.962ENSCGRG00000003717Puf609876.937Cricetulus_griseus_crigri
ENSPLAG00000017025-9178.269ENSCSEG00000014845-9180.385Cynoglossus_semilaevis
ENSPLAG00000017025-9480.295ENSCSEG00000019887puf60b9978.995Cynoglossus_semilaevis
ENSPLAG00000017025-8290.672ENSCVAG00000001560-9891.126Cyprinodon_variegatus
ENSPLAG00000017025-9081.359ENSCVAG00000009386puf60b10081.553Cyprinodon_variegatus
ENSPLAG00000017025-9075.614ENSDARG00000001241puf60b10085.271Danio_rerio
ENSPLAG00000017025-9082.027ENSDARG00000032175puf60a10088.655Danio_rerio
ENSPLAG00000017025-9762.791ENSDNOG00000043278PUF609562.857Dasypus_novemcinctus
ENSPLAG00000017025-9080.695ENSDORG00000004585Puf609977.355Dipodomys_ordii
ENSPLAG00000017025-8259.748FBgn0028577hfp9945.633Drosophila_melanogaster
ENSPLAG00000017025-8768.283ENSEBUG00000005470-8868.283Eptatretus_burgeri
ENSPLAG00000017025-9060.137ENSEBUG00000014291puf60b8461.815Eptatretus_burgeri
ENSPLAG00000017025-9279.584ENSEASG00005009695PUF609979.623Equus_asinus_asinus
ENSPLAG00000017025-9279.584ENSECAG00000024681PUF609879.623Equus_caballus
ENSPLAG00000017025-9577.879ENSELUG00000006507puf60b10076.782Esox_lucius
ENSPLAG00000017025-9283.616ENSELUG00000018443-10084.746Esox_lucius
ENSPLAG00000017025-9279.584ENSFCAG00000001045PUF6010080.925Felis_catus
ENSPLAG00000017025-9072.008ENSFALG00000001136PUF609772.780Ficedula_albicollis
ENSPLAG00000017025-9180.344ENSFDAG00000017177PUF609877.117Fukomys_damarensis
ENSPLAG00000017025-9281.250ENSFHEG00000020046puf60b10082.330Fundulus_heteroclitus
ENSPLAG00000017025-8693.196ENSFHEG00000021687PUF6010093.697Fundulus_heteroclitus
ENSPLAG00000017025-9167.681ENSGMOG00000006392puf60b10067.932Gadus_morhua
ENSPLAG00000017025-6084.348ENSGALG00000039901PUF609484.348Gallus_gallus
ENSPLAG00000017025-9281.250ENSGAFG00000021040puf60b10082.330Gambusia_affinis
ENSPLAG00000017025-9096.040ENSGAFG00000004334-10096.040Gambusia_affinis
ENSPLAG00000017025-9269.754ENSGACG00000004717puf60b9969.886Gasterosteus_aculeatus
ENSPLAG00000017025-9275.526ENSGACG00000001484-9977.246Gasterosteus_aculeatus
ENSPLAG00000017025-9080.695ENSGAGG00000013289PUF609279.507Gopherus_agassizii
ENSPLAG00000017025-9379.104ENSGGOG00000004646PUF6010079.143Gorilla_gorilla
ENSPLAG00000017025-9287.786ENSHBUG00000009634-10087.977Haplochromis_burtoni
ENSPLAG00000017025-9381.051ENSHBUG00000015118puf60b10082.330Haplochromis_burtoni
ENSPLAG00000017025-9180.344ENSHGLG00000006111PUF609877.117Heterocephalus_glaber_female
ENSPLAG00000017025-9180.344ENSHGLG00100012362PUF609877.117Heterocephalus_glaber_male
ENSPLAG00000017025-9177.239ENSHCOG00000015541puf60b10078.545Hippocampus_comes
ENSPLAG00000017025-8872.984ENSHCOG00000000378-9971.567Hippocampus_comes
ENSPLAG00000017025-9081.034ENSIPUG00000002453puf60a10081.418Ictalurus_punctatus
ENSPLAG00000017025-9075.706ENSIPUG00000004660puf60b10075.706Ictalurus_punctatus
ENSPLAG00000017025-9080.888ENSSTOG00000025037PUF609877.596Ictidomys_tridecemlineatus
ENSPLAG00000017025-9080.695ENSJJAG00000001076Puf609877.396Jaculus_jaculus
ENSPLAG00000017025-9082.330ENSKMAG00000016745puf60b10082.524Kryptolebias_marmoratus
ENSPLAG00000017025-9085.797ENSKMAG00000010106-10086.372Kryptolebias_marmoratus
ENSPLAG00000017025-9179.271ENSLBEG00000012505puf60b10079.350Labrus_bergylta
ENSPLAG00000017025-6276.309ENSLACG00000005456PUF609976.309Latimeria_chalumnae
ENSPLAG00000017025-9283.523ENSLOCG00000010106puf60b10083.523Lepisosteus_oculatus
ENSPLAG00000017025-9079.730ENSLAFG00000022929PUF609777.491Loxodonta_africana
ENSPLAG00000017025-9279.395ENSMFAG00000043373PUF609980.038Macaca_fascicularis
ENSPLAG00000017025-9379.104ENSMMUG00000013558PUF6010079.143Macaca_mulatta
ENSPLAG00000017025-9279.395ENSMNEG00000031099PUF609979.434Macaca_nemestrina
ENSPLAG00000017025-9080.695ENSMLEG00000040009PUF6010080.732Mandrillus_leucophaeus
ENSPLAG00000017025-9290.440ENSMAMG00000019476-10090.440Mastacembelus_armatus
ENSPLAG00000017025-9181.226ENSMAMG00000010394puf60b10079.584Mastacembelus_armatus
ENSPLAG00000017025-9082.330ENSMZEG00005018515puf60b10082.330Maylandia_zebra
ENSPLAG00000017025-9287.977ENSMZEG00005019425-10088.168Maylandia_zebra
ENSPLAG00000017025-9280.076ENSMGAG00000013070PUF609584.971Meleagris_gallopavo
ENSPLAG00000017025-8664.706ENSMAUG00000018549-9564.575Mesocricetus_auratus
ENSPLAG00000017025-6283.702ENSMAUG00000014267-9779.146Mesocricetus_auratus
ENSPLAG00000017025-9577.697ENSMICG00000012226PUF609980.114Microcebus_murinus
ENSPLAG00000017025-9179.962ENSMOCG00000018780Puf609977.658Microtus_ochrogaster
ENSPLAG00000017025-9177.886ENSMMOG00000018059-9983.645Mola_mola
ENSPLAG00000017025-9082.330ENSMMOG00000004217puf60b10082.330Mola_mola
ENSPLAG00000017025-9577.348ENSMODG00000009161PUF609877.390Monodelphis_domestica
ENSPLAG00000017025-9289.313ENSMALG00000000200-10089.122Monopterus_albus
ENSPLAG00000017025-9274.383ENSMALG00000006797puf60b10074.242Monopterus_albus
ENSPLAG00000017025-9180.153MGP_CAROLIEiJ_G0019910Puf609876.937Mus_caroli
ENSPLAG00000017025-9180.153ENSMUSG00000002524Puf609876.937Mus_musculus
ENSPLAG00000017025-9180.153MGP_PahariEiJ_G0019920Puf609876.937Mus_pahari
ENSPLAG00000017025-9180.153MGP_SPRETEiJ_G0020812Puf609876.937Mus_spretus
ENSPLAG00000017025-9080.695ENSMPUG00000008137PUF609975.972Mustela_putorius_furo
ENSPLAG00000017025-9080.116ENSMLUG00000000238-9876.867Myotis_lucifugus
ENSPLAG00000017025-9274.242ENSMLUG00000013032-9974.669Myotis_lucifugus
ENSPLAG00000017025-9080.695ENSNGAG00000000712Puf6010080.732Nannospalax_galili
ENSPLAG00000017025-9288.145ENSNBRG00000017223-10088.337Neolamprologus_brichardi
ENSPLAG00000017025-7380.907ENSNBRG00000013047puf60b9780.907Neolamprologus_brichardi
ENSPLAG00000017025-9379.104ENSNLEG00000002156PUF6010079.143Nomascus_leucogenys
ENSPLAG00000017025-6689.209ENSOPRG00000002147PUF607589.153Ochotona_princeps
ENSPLAG00000017025-8860.563ENSODEG00000015513-9560.442Octodon_degus
ENSPLAG00000017025-6585.088ENSODEG00000014024-9784.375Octodon_degus
ENSPLAG00000017025-9287.214ENSONIG00000014030-9987.405Oreochromis_niloticus
ENSPLAG00000017025-9181.958ENSONIG00000006247puf60b9881.958Oreochromis_niloticus
ENSPLAG00000017025-8966.535ENSOANG00000006962PUF609966.535Ornithorhynchus_anatinus
ENSPLAG00000017025-9087.549ENSORLG00000028655-9987.549Oryzias_latipes
ENSPLAG00000017025-9281.061ENSORLG00000012279puf60b10082.136Oryzias_latipes
ENSPLAG00000017025-9281.061ENSORLG00020007333puf6010082.136Oryzias_latipes_hni
ENSPLAG00000017025-9288.123ENSORLG00020018144-9988.123Oryzias_latipes_hni
ENSPLAG00000017025-9281.321ENSORLG00015007718puf60b10082.205Oryzias_latipes_hsok
ENSPLAG00000017025-9287.931ENSORLG00015016833-9987.931Oryzias_latipes_hsok
ENSPLAG00000017025-9289.060ENSOMEG00000022185-9989.060Oryzias_melastigma
ENSPLAG00000017025-9277.551ENSOMEG00000001643puf60b9981.148Oryzias_melastigma
ENSPLAG00000017025-9080.888ENSOGAG00000006259PUF609877.536Otolemur_garnettii
ENSPLAG00000017025-9177.308ENSOARG00000016235PUF609878.736Ovis_aries
ENSPLAG00000017025-9279.434ENSPPAG00000029933PUF609979.473Pan_paniscus
ENSPLAG00000017025-9279.584ENSPPRG00000003257PUF6010080.925Panthera_pardus
ENSPLAG00000017025-9277.925ENSPTIG00000009795PUF609977.966Panthera_tigris_altaica
ENSPLAG00000017025-9379.104ENSPTRG00000043963-10079.143Pan_troglodytes
ENSPLAG00000017025-9279.434ENSPTRG00000020670PUF609979.473Pan_troglodytes
ENSPLAG00000017025-9279.395ENSPANG00000021936PUF609979.434Papio_anubis
ENSPLAG00000017025-9282.732ENSPKIG00000012204puf60b10083.495Paramormyrops_kingsleyae
ENSPLAG00000017025-9284.398ENSPKIG00000004295puf60a10089.645Paramormyrops_kingsleyae
ENSPLAG00000017025-9179.962ENSPSIG00000004679PUF609979.962Pelodiscus_sinensis
ENSPLAG00000017025-9180.577ENSPMGG00000013444puf60b10080.577Periophthalmus_magnuspinnatus
ENSPLAG00000017025-9179.962ENSPEMG00000008820Puf609877.658Peromyscus_maniculatus_bairdii
ENSPLAG00000017025-9578.650ENSPCIG00000020270PUF609880.925Phascolarctos_cinereus
ENSPLAG00000017025-9299.420ENSPFOG00000011118-10099.420Poecilia_formosa
ENSPLAG00000017025-9281.250ENSPFOG00000019217puf60b9979.463Poecilia_formosa
ENSPLAG00000017025-9281.250ENSPMEG00000000838puf60b10082.330Poecilia_mexicana
ENSPLAG00000017025-10099.284ENSPMEG00000009767-10099.284Poecilia_mexicana
ENSPLAG00000017025-9278.967ENSPREG00000005440puf60b10079.151Poecilia_reticulata
ENSPLAG00000017025-7279.187ENSPPYG00000018951-9579.236Pongo_abelii
ENSPLAG00000017025-7280.668ENSPCAG00000014837PUF6010080.714Procavia_capensis
ENSPLAG00000017025-9279.848ENSPCOG00000027981PUF609979.886Propithecus_coquereli
ENSPLAG00000017025-9088.750ENSPVAG00000016167PUF608188.750Pteropus_vampyrus
ENSPLAG00000017025-9082.330ENSPNYG00000002556puf60b10082.330Pundamilia_nyererei
ENSPLAG00000017025-9287.977ENSPNYG00000004273-10088.168Pundamilia_nyererei
ENSPLAG00000017025-9374.194ENSPNAG00000019415puf60b9274.194Pygocentrus_nattereri
ENSPLAG00000017025-9180.658ENSPNAG00000019909puf60a9981.503Pygocentrus_nattereri
ENSPLAG00000017025-9180.153ENSRNOG00000009960Puf609876.937Rattus_norvegicus
ENSPLAG00000017025-9379.104ENSRBIG00000035274PUF6010079.143Rhinopithecus_bieti
ENSPLAG00000017025-9279.395ENSRROG00000029360PUF6010079.284Rhinopithecus_roxellana
ENSPLAG00000017025-9277.925ENSSBOG00000027089PUF609977.966Saimiri_boliviensis_boliviensis
ENSPLAG00000017025-8577.755ENSSHAG00000006668PUF609378.279Sarcophilus_harrisii
ENSPLAG00000017025-9077.714ENSSFOG00015019619puf60b9981.542Scleropages_formosus
ENSPLAG00000017025-9279.279ENSSFOG00015019371puf60a9885.132Scleropages_formosus
ENSPLAG00000017025-7087.629ENSSMAG00000016381puf60b7887.662Scophthalmus_maximus
ENSPLAG00000017025-9178.947ENSSDUG00000009935puf60b9981.725Seriola_dumerili
ENSPLAG00000017025-9288.676ENSSDUG00000007048-9988.676Seriola_dumerili
ENSPLAG00000017025-9086.965ENSSLDG00000007366-10086.965Seriola_lalandi_dorsalis
ENSPLAG00000017025-9182.592ENSSLDG00000024011puf60b10080.529Seriola_lalandi_dorsalis
ENSPLAG00000017025-5973.314ENSSPUG00000013518PUF609273.314Sphenodon_punctatus
ENSPLAG00000017025-9089.648ENSSPAG00000020285-10090.039Stegastes_partitus
ENSPLAG00000017025-9278.229ENSSPAG00000012144puf60b10080.529Stegastes_partitus
ENSPLAG00000017025-9180.344ENSSSCG00000038800PUF6010076.596Sus_scrofa
ENSPLAG00000017025-9178.667ENSTGUG00000012797-10078.667Taeniopygia_guttata
ENSPLAG00000017025-9085.545ENSTRUG00000008843-10085.545Takifugu_rubripes
ENSPLAG00000017025-9182.150ENSTRUG00000005420puf60b10080.603Takifugu_rubripes
ENSPLAG00000017025-9184.902ENSTNIG00000003069-9985.294Tetraodon_nigroviridis
ENSPLAG00000017025-9182.150ENSTNIG00000013675puf60b9982.409Tetraodon_nigroviridis
ENSPLAG00000017025-5182.215ENSTBEG00000002751-9982.215Tupaia_belangeri
ENSPLAG00000017025-6964.348ENSTBEG00000001899-10065.896Tupaia_belangeri
ENSPLAG00000017025-9079.497ENSTTRG00000017088PUF6010080.154Tursiops_truncatus
ENSPLAG00000017025-9279.584ENSUAMG00000024917PUF609979.623Ursus_americanus
ENSPLAG00000017025-9076.062ENSUMAG00000000272PUF609275.915Ursus_maritimus
ENSPLAG00000017025-9080.888ENSVVUG00000022527PUF6010080.925Vulpes_vulpes
ENSPLAG00000017025-9079.730ENSXETG00000012469puf609779.730Xenopus_tropicalis
ENSPLAG00000017025-9079.612ENSXCOG00000012355puf60b10079.806Xiphophorus_couchianus
ENSPLAG00000017025-9281.250ENSXMAG00000001862puf60b10082.330Xiphophorus_maculatus
ENSPLAG00000017025-9293.555ENSXMAG00000010507-9993.555Xiphophorus_maculatus

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