EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000017344 (Gene tree)
Gene ID: 106946162
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 9641 bases
Position: chrKQ545493.1:583527-593167
Accession: 106946162
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000028184	HRDC	PF00570.23	2.2e-13	1	1
ENSPLAP00000028184	BDHCT	PF08072.11	1.2e-19	1	1
ENSPLAP00000028184	DEAD	PF00270.29	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000021897	-	4573	XM_015030327	ENSPLAP00000028184	1366 (aa)	XP_014885813	UPI00072E44C4

Gene Model

Click here to download ENSPLAG00000017344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017344's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000017344	blm	59	65.045	ENSG00000197299	BLM	54	73.770	Homo_sapiens
ENSPLAG00000017344	blm	100	69.528	ENSAPOG00000017966	blm	100	70.086	Acanthochromis_polyacanthus
ENSPLAG00000017344	blm	64	65.000	ENSAMEG00000013843	BLM	63	64.487	Ailuropoda_melanoleuca
ENSPLAG00000017344	blm	100	70.368	ENSACIG00000023762	blm	100	70.106	Amphilophus_citrinellus
ENSPLAG00000017344	blm	100	69.593	ENSAOCG00000003318	blm	100	70.293	Amphiprion_ocellaris
ENSPLAG00000017344	blm	100	68.956	ENSAPEG00000018105	blm	100	68.956	Amphiprion_percula
ENSPLAG00000017344	blm	99	69.335	ENSATEG00000006421	blm	100	68.906	Anabas_testudineus
ENSPLAG00000017344	blm	80	50.900	ENSAPLG00000006878	BLM	72	60.323	Anas_platyrhynchos
ENSPLAG00000017344	blm	60	65.806	ENSACAG00000014275	BLM	84	65.677	Anolis_carolinensis
ENSPLAG00000017344	blm	59	64.872	ENSANAG00000038415	BLM	54	73.566	Aotus_nancymaae
ENSPLAG00000017344	blm	100	69.782	ENSACLG00000020354	blm	100	69.571	Astatotilapia_calliptera
ENSPLAG00000017344	blm	89	72.183	ENSAMXG00000016970	blm	87	71.897	Astyanax_mexicanus
ENSPLAG00000017344	blm	61	35.548	WBGene00001865	him-6	71	39.667	Caenorhabditis_elegans
ENSPLAG00000017344	blm	59	65.641	ENSCJAG00000009803	BLM	54	73.975	Callithrix_jacchus
ENSPLAG00000017344	blm	72	63.094	ENSCAFG00000012385	BLM	71	62.833	Canis_familiaris
ENSPLAG00000017344	blm	69	63.094	ENSCAFG00020016111	BLM	92	65.195	Canis_lupus_dingo
ENSPLAG00000017344	blm	77	79.133	ENSCHIG00000010329	BLM	54	79.133	Capra_hircus
ENSPLAG00000017344	blm	59	64.623	ENSTSYG00000012368	BLM	54	72.746	Carlito_syrichta
ENSPLAG00000017344	blm	62	71.014	ENSCAPG00000017976	BLM	75	71.014	Cavia_aperea
ENSPLAG00000017344	blm	83	49.633	ENSCPOG00000001761	BLM	59	61.290	Cavia_porcellus
ENSPLAG00000017344	blm	60	65.128	ENSCCAG00000023069	BLM	55	73.770	Cebus_capucinus
ENSPLAG00000017344	blm	59	65.045	ENSCATG00000040609	BLM	75	75.738	Cercocebus_atys
ENSPLAG00000017344	blm	99	46.778	ENSCLAG00000012111	BLM	59	62.395	Chinchilla_lanigera
ENSPLAG00000017344	blm	59	65.045	ENSCSAG00000017040	BLM	61	65.173	Chlorocebus_sabaeus
ENSPLAG00000017344	blm	50	60.185	ENSCHOG00000006255	BLM	50	60.185	Choloepus_hoffmanni
ENSPLAG00000017344	blm	82	51.080	ENSCPBG00000025000	BLM	72	68.837	Chrysemys_picta_bellii
ENSPLAG00000017344	blm	56	65.979	ENSCGRG00001024897	Blm	55	65.979	Cricetulus_griseus_chok1gshd
ENSPLAG00000017344	blm	95	65.116	ENSCSEG00000013483	blm	99	64.834	Cynoglossus_semilaevis
ENSPLAG00000017344	blm	76	78.017	ENSCVAG00000017583	blm	97	74.619	Cyprinodon_variegatus
ENSPLAG00000017344	blm	99	57.320	ENSDARG00000077089	blm	79	77.186	Danio_rerio
ENSPLAG00000017344	blm	60	64.194	ENSDNOG00000010159	BLM	58	64.194	Dasypus_novemcinctus
ENSPLAG00000017344	blm	59	62.349	ENSDORG00000011033	Blm	79	62.470	Dipodomys_ordii
ENSPLAG00000017344	blm	59	59.685	ENSEASG00005006727	BLM	58	59.080	Equus_asinus_asinus
ENSPLAG00000017344	blm	56	64.668	ENSECAG00000011405	BLM	58	62.244	Equus_caballus
ENSPLAG00000017344	blm	60	63.811	ENSEEUG00000001434	BLM	59	63.427	Erinaceus_europaeus
ENSPLAG00000017344	blm	99	55.758	ENSELUG00000019098	blm	99	53.908	Esox_lucius
ENSPLAG00000017344	blm	64	64.879	ENSFCAG00000006087	BLM	63	73.006	Felis_catus
ENSPLAG00000017344	blm	79	52.028	ENSFALG00000010981	BLM	68	60.748	Ficedula_albicollis
ENSPLAG00000017344	blm	53	66.822	ENSFDAG00000012658	BLM	55	66.822	Fukomys_damarensis
ENSPLAG00000017344	blm	100	79.755	ENSFHEG00000002553	blm	100	79.035	Fundulus_heteroclitus
ENSPLAG00000017344	blm	99	59.388	ENSGMOG00000016431	blm	98	70.047	Gadus_morhua
ENSPLAG00000017344	blm	82	51.417	ENSGALG00000008256	BLM	70	63.761	Gallus_gallus
ENSPLAG00000017344	blm	100	94.161	ENSGAFG00000001117	blm	100	94.161	Gambusia_affinis
ENSPLAG00000017344	blm	99	64.370	ENSGACG00000010863	blm	100	88.258	Gasterosteus_aculeatus
ENSPLAG00000017344	blm	65	55.748	ENSGAGG00000005383	BLM	65	69.841	Gopherus_agassizii
ENSPLAG00000017344	blm	59	64.789	ENSGGOG00000007710	BLM	75	75.738	Gorilla_gorilla
ENSPLAG00000017344	blm	100	71.357	ENSHBUG00000015943	blm	100	71.213	Haplochromis_burtoni
ENSPLAG00000017344	blm	77	52.973	ENSHGLG00000013231	BLM	54	63.949	Heterocephalus_glaber_female
ENSPLAG00000017344	blm	74	68.511	ENSHCOG00000011455	blm	100	68.054	Hippocampus_comes
ENSPLAG00000017344	blm	75	63.398	ENSIPUG00000000529	blm	86	61.605	Ictalurus_punctatus
ENSPLAG00000017344	blm	75	54.011	ENSSTOG00000005000	BLM	61	60.162	Ictidomys_tridecemlineatus
ENSPLAG00000017344	blm	56	57.653	ENSJJAG00000016322	Blm	73	53.376	Jaculus_jaculus
ENSPLAG00000017344	blm	100	76.118	ENSKMAG00000016608	blm	100	75.469	Kryptolebias_marmoratus
ENSPLAG00000017344	blm	62	76.190	ENSLBEG00000018729	blm	98	76.436	Labrus_bergylta
ENSPLAG00000017344	blm	57	68.987	ENSLACG00000006490	BLM	54	68.608	Latimeria_chalumnae
ENSPLAG00000017344	blm	99	51.757	ENSLOCG00000014302	blm	60	69.434	Lepisosteus_oculatus
ENSPLAG00000017344	blm	56	65.173	ENSMFAG00000042982	BLM	75	76.066	Macaca_fascicularis
ENSPLAG00000017344	blm	56	65.173	ENSMMUG00000019526	BLM	75	76.066	Macaca_mulatta
ENSPLAG00000017344	blm	56	64.917	ENSMNEG00000031251	BLM	75	75.738	Macaca_nemestrina
ENSPLAG00000017344	blm	59	62.791	ENSMLEG00000032934	BLM	57	62.791	Mandrillus_leucophaeus
ENSPLAG00000017344	blm	99	69.920	ENSMAMG00000008726	blm	99	70.137	Mastacembelus_armatus
ENSPLAG00000017344	blm	100	68.890	ENSMZEG00005022323	blm	100	68.654	Maylandia_zebra
ENSPLAG00000017344	blm	87	62.771	ENSMAUG00000008953	Blm	62	63.221	Mesocricetus_auratus
ENSPLAG00000017344	blm	56	65.429	ENSMICG00000034442	BLM	50	73.770	Microcebus_murinus
ENSPLAG00000017344	blm	56	66.021	ENSMOCG00000016367	Blm	57	64.764	Microtus_ochrogaster
ENSPLAG00000017344	blm	100	67.668	ENSMMOG00000006959	blm	100	67.024	Mola_mola
ENSPLAG00000017344	blm	100	69.943	ENSMALG00000007323	blm	100	70.085	Monopterus_albus
ENSPLAG00000017344	blm	56	65.245	MGP_CAROLIEiJ_G0029907	Blm	55	64.987	Mus_caroli
ENSPLAG00000017344	blm	56	65.245	ENSMUSG00000030528	Blm	54	65.245	Mus_musculus
ENSPLAG00000017344	blm	56	65.891	MGP_PahariEiJ_G0013129	Blm	55	65.504	Mus_pahari
ENSPLAG00000017344	blm	56	65.419	MGP_SPRETEiJ_G0031009	Blm	55	65.419	Mus_spretus
ENSPLAG00000017344	blm	51	71.351	ENSMPUG00000015657	BLM	58	71.351	Mustela_putorius_furo
ENSPLAG00000017344	blm	77	56.818	ENSMLUG00000014697	BLM	58	64.751	Myotis_lucifugus
ENSPLAG00000017344	blm	100	68.992	ENSNBRG00000019702	blm	100	68.649	Neolamprologus_brichardi
ENSPLAG00000017344	blm	59	62.791	ENSNLEG00000012087	BLM	74	61.168	Nomascus_leucogenys
ENSPLAG00000017344	blm	79	49.324	ENSMEUG00000007253	BLM	78	48.976	Notamacropus_eugenii
ENSPLAG00000017344	blm	52	65.084	ENSOPRG00000011667	BLM	51	64.665	Ochotona_princeps
ENSPLAG00000017344	blm	74	50.956	ENSODEG00000015373	BLM	80	56.954	Octodon_degus
ENSPLAG00000017344	blm	100	66.965	ENSONIG00000015193	blm	100	67.171	Oreochromis_niloticus
ENSPLAG00000017344	blm	55	65.375	ENSOANG00000009316	-	99	65.116	Ornithorhynchus_anatinus
ENSPLAG00000017344	blm	100	73.127	ENSORLG00000008110	blm	100	72.294	Oryzias_latipes
ENSPLAG00000017344	blm	100	73.055	ENSORLG00020004812	blm	100	72.150	Oryzias_latipes_hni
ENSPLAG00000017344	blm	100	72.839	ENSORLG00015018640	blm	100	73.796	Oryzias_latipes_hsok
ENSPLAG00000017344	blm	100	72.026	ENSOMEG00000023545	blm	100	72.026	Oryzias_melastigma
ENSPLAG00000017344	blm	61	64.139	ENSOGAG00000005708	BLM	53	71.646	Otolemur_garnettii
ENSPLAG00000017344	blm	59	65.173	ENSPPAG00000032173	BLM	54	73.975	Pan_paniscus
ENSPLAG00000017344	blm	59	65.000	ENSPTRG00000007460	BLM	54	73.922	Pan_troglodytes
ENSPLAG00000017344	blm	56	65.173	ENSPANG00000018572	BLM	75	76.066	Papio_anubis
ENSPLAG00000017344	blm	89	71.834	ENSPKIG00000008954	blm	87	71.395	Paramormyrops_kingsleyae
ENSPLAG00000017344	blm	70	68.884	ENSPMGG00000006629	blm	100	69.137	Periophthalmus_magnuspinnatus
ENSPLAG00000017344	blm	100	99.048	ENSPFOG00000005059	blm	100	99.048	Poecilia_formosa
ENSPLAG00000017344	blm	100	98.902	ENSPMEG00000000321	blm	100	98.902	Poecilia_mexicana
ENSPLAG00000017344	blm	100	95.328	ENSPREG00000007715	blm	100	95.036	Poecilia_reticulata
ENSPLAG00000017344	blm	59	64.020	ENSPPYG00000006784	BLM	58	64.277	Pongo_abelii
ENSPLAG00000017344	blm	59	60.917	ENSPCAG00000008960	BLM	59	60.676	Procavia_capensis
ENSPLAG00000017344	blm	82	60.465	ENSPCOG00000000439	BLM	56	60.465	Propithecus_coquereli
ENSPLAG00000017344	blm	70	76.412	ENSPVAG00000011642	BLM	59	76.412	Pteropus_vampyrus
ENSPLAG00000017344	blm	100	60.842	ENSPNYG00000010956	blm	100	60.659	Pundamilia_nyererei
ENSPLAG00000017344	blm	100	57.242	ENSPNAG00000011714	blm	60	73.302	Pygocentrus_nattereri
ENSPLAG00000017344	blm	56	65.508	ENSRNOG00000011213	Blm	55	65.380	Rattus_norvegicus
ENSPLAG00000017344	blm	59	64.533	ENSRBIG00000029656	BLM	75	75.738	Rhinopithecus_bieti
ENSPLAG00000017344	blm	59	64.533	ENSRROG00000037871	BLM	75	75.738	Rhinopithecus_roxellana
ENSPLAG00000017344	blm	51	73.156	ENSSBOG00000030957	BLM	54	73.361	Saimiri_boliviensis_boliviensis
ENSPLAG00000017344	blm	80	51.342	ENSSHAG00000007988	BLM	61	61.737	Sarcophilus_harrisii
ENSPLAG00000017344	blm	76	64.129	ENSSFOG00015015462	blm	80	63.083	Scleropages_formosus
ENSPLAG00000017344	blm	100	68.508	ENSSMAG00000001120	blm	100	68.534	Scophthalmus_maximus
ENSPLAG00000017344	blm	100	70.421	ENSSDUG00000010955	blm	100	69.993	Seriola_dumerili
ENSPLAG00000017344	blm	100	69.829	ENSSLDG00000000634	blm	100	69.187	Seriola_lalandi_dorsalis
ENSPLAG00000017344	blm	60	60.385	ENSSARG00000006398	BLM	62	60.540	Sorex_araneus
ENSPLAG00000017344	blm	75	53.759	ENSSPUG00000000013	BLM	98	50.865	Sphenodon_punctatus
ENSPLAG00000017344	blm	99	70.423	ENSSPAG00000013999	blm	99	70.078	Stegastes_partitus
ENSPLAG00000017344	blm	68	65.769	ENSSSCG00000001816	BLM	65	68.144	Sus_scrofa
ENSPLAG00000017344	blm	79	46.444	ENSTGUG00000009959	-	80	56.983	Taeniopygia_guttata
ENSPLAG00000017344	blm	99	65.043	ENSTRUG00000019860	blm	99	64.706	Takifugu_rubripes
ENSPLAG00000017344	blm	85	65.128	ENSUMAG00000009105	BLM	96	67.313	Ursus_maritimus
ENSPLAG00000017344	blm	65	61.361	ENSVPAG00000000085	BLM	64	61.361	Vicugna_pacos
ENSPLAG00000017344	blm	56	64.834	ENSVVUG00000006402	BLM	55	77.236	Vulpes_vulpes
ENSPLAG00000017344	blm	99	47.368	ENSXETG00000007847	blm	55	66.880	Xenopus_tropicalis
ENSPLAG00000017344	blm	100	89.714	ENSXCOG00000020227	blm	100	89.714	Xiphophorus_couchianus
ENSPLAG00000017344	blm	100	94.015	ENSXMAG00000002951	blm	100	94.015	Xiphophorus_maculatus