EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000017417 (Gene tree)
Gene ID: 106934797
Gene Symbol: -
Alias: -
Full Name: splicing factor%2C arginine/serine-rich 15-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 13573 bases
Position: chrKQ547172.1:104975-118547
Accession: 106934797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000013849	RRM_1	PF00076.22	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000021978	-	5531	XM_015014925	ENSPLAP00000013849	1208 (aa)	XP_014870411	UPI00072EB76C

Gene Model

Click here to download ENSPLAG00000017417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000017417	-	67	100.000	ENSPLAG00000001972	scaf4a	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000017417	-	98	71.292	ENSATEG00000002140	-	78	78.637	Anabas_testudineus
ENSPLAG00000017417	-	61	81.757	ENSACLG00000002010	-	66	79.714	Astatotilapia_calliptera
ENSPLAG00000017417	-	65	85.732	ENSCVAG00000019389	-	99	81.326	Cyprinodon_variegatus
ENSPLAG00000017417	-	61	83.021	ENSKMAG00000004031	-	99	72.574	Kryptolebias_marmoratus
ENSPLAG00000017417	-	99	98.579	ENSPMEG00000017911	-	100	98.579	Poecilia_mexicana
ENSPLAG00000017417	-	100	95.440	ENSPMEG00000007437	-	100	95.040	Poecilia_mexicana
ENSPLAG00000017417	-	100	89.535	ENSPREG00000012680	-	100	94.571	Poecilia_reticulata
ENSPLAG00000017417	-	61	81.622	ENSPNYG00000023102	-	66	79.584	Pundamilia_nyererei
ENSPLAG00000017417	-	69	82.726	ENSSPAG00000006625	-	66	80.674	Stegastes_partitus
ENSPLAG00000017417	-	100	96.694	ENSXMAG00000003256	-	100	96.694	Xiphophorus_maculatus